A novel method for the synthesis of cellulose nanofibril whiskers from banana fibers and characterization

Alkali treatment coupled with high pressure defibrillation and acid treatment have been tried on banana fibers obtained from the pseudo stem of the banana plant Musa sapientum. The structure and morphology of the fibers have been found to be affected on the basis of the concentration of the alkali and acid and also on the pressure applied. Steam explosion in alkaline medium followed by acidic medium is found to be effective in the depolymerization and defibrillation of the fiber to produce banana nanowhiskers. The chemical constituents of raw and steam exploded fibers were analyzed according to the ASTM standards. Structural analysis of steam exploded fibers was carried out by FTIR and XRD. The fiber diameter and percentage crystallinity of the modified fibers were investigated using X-ray diffraction studies. Characterization of the fibers by SFM and TEM supports the evidence for the development of nanofibrils of banana fibers.     

Listeria monocytogenes subtypes associated with mortality among fallow deer (Dama dama).

Different subtypes of Listeria monocytogenes were isolated from various animal and environmental samples during an episode of increased mortality on a fallow deer (Dama dama) farm. During a 4-wk period, six fallow deer died, including four does, one fawn, and one adult buck. Prior to death, one of the does had exhibited central nervous system signs characteristic of listeriosis. Postmortem examination of the six deer showed no histologic changes typical of listeriosis, although inflammatory changes were present in several organs. Different subtypes of L. monocytogenes were isolated from brain samples from six deer, from fodder and soil from the deer feeding area, and from faces of some healthy animals on the farm. Listeria monocytogenes, which was frequently isolated in the environment of the farm, was considered the probable major cause of mortality in these fallow deer.     

Heat and mass transfer studies of palm kernel cake (PKC) in fluidized bed fermenter

Solid state fermentation (SSF) which involves the growth of microorganism on moist solid substrates in the absence of free flowing water, has gained renewed attention over submerged fermentation for specific applications. During the SSF process in fermenter, there are three main engineering problems encountered such as the removal of metabolic heat from the substrate, diffusion of O₂ and moisture through the substrate, and heterogeneity of the substrate and inoculum. A fluidized bed fermenter in which the particles move independently like a fluid was proposed to conduct the study. Throughout the study, rapid heat transfer from PKC to air was experimentally observed within the first 150 s with a temperature drop of 30 °C. This indicated that the excellent heat transfer between palm kernel cake and air allows solid state fermentation of PKC without accumulation of metabolic heat in the fermenter. Apart from heat removal, water adsorption study on PKC from air to bed was carried out. It showed that the increase of adsorbed water in PKC was proportional to air relative humidity and inversely proportional to superficial air velocity. The maximum moisture content adsorbed by PKC under fluidization conditions was around 10% (on dry basis). Finally, mathematical models for heat and mass transfer were proposed which can predict the experimental data quite satisfactorily.     

Flesh characteristics: estimation of genetic parameters and correlated responses to selection for growth rate in the GIFT strain

Flesh characteristics comprising chemical composition (protein, fat and moisture percentages and pH) as well as a sensory attribute (colour) were measured in 1951 fillet samples from two generations of two populations (a selection line, selected for increased harvest weight, and a control line, selected for average breeding values for harvest weight) of the genetically improved farmed tilapia (GIFT) strain of Nile tilapia. These data were jointly analysed with 5331 harvest weight records from three generations to estimate genetic parameters and correlated selection responses. Multiple trait animal models were used in the analyses. The potential for correlated responses was evaluated by estimating heritabilities and genetic correlations between body traits (weight, length, depth and width) and fillet traits (weight and yield) with the above mentioned flesh characteristics. The heritabilities for protein%, fat% and colour were low (0.06–0.11), whereas for moisture% and pH they were moderate (0.15–0.20). Genetic correlations among some flesh characteristics (moisture% with protein%, fat% and pH and with fat%) as well as between body and fillet traits with flesh characteristics, were significantly different from zero but low (?0.34 to 0.31). Correlated responses were evaluated by comparing the least squares means between the Selection and Control lines. Our results indicate that selection for high growth increased harvest weight in the Selection line relative to the Control line but it did not change the flesh characteristics of the GIFT strain.     

VGLMs and VGAMs: An overview for applications in fisheries research

The vector generalized linear and additive model (VGLM/VGAM) classes of statistical regression models implement general maximum likelihood estimation and smoothing. The VGLM/VGAM framework is very general and is shown to include many popular fisheries regression models such as GLMs and GAMs, the negative binomial (NB), the zero-inflated Poisson (ZIP) and ZINB, the zero-altered Poisson (ZAP) and ZANB as special cases. The primary purpose of this article is to introduce the VGLM/VGAM methodology into fisheries science. To this end, data from the 2008 FIPS-MOUCHE World Fly Fishing Championships is used to illustrate the chief advantages of the framework, viz. its large size and its ability to fit each model in a very flexible manner. Having a large framework leads to greater efficiencies in the practical modelling of data. The specific questions examined fall under two categories: (i) what distribution do the fish lengths have in each of the sectors? (ii) can fish catch reduction be detected and if so, how can the effects be ameliorated? As well as the above models, the utility of several other seemingly disparate regression models to fisheries research are presented, such as the bivariate odds-ratio model, the generalized extreme value distribution, and several quantile regression techniques.     

Effects of replacing dietary fish oil and squid liver oil with vegetable oils on the growth,tissue fatty acid profile and total carotenoids of the giant freshwater prawn, Macrobrachium rosenbergii

A feeding trial was conducted to investigate the complete substitution of either fish oil (FO) or squid liver oil (SLO) with crude palm oil (CPO), canola oil (CO) sunflower oil (SFO) or linseed oil (LO), as the sole added lipid source in diets fed to triplicate groups of giant freshwater prawn, Macrobrachium rosenbergii (initial weight = 0.42 ± 0.01 g) for 6 weeks. Prawns fed the CO or SLO diets showed significantly higher (P < 0.05) specific growth rate than those fed the FO or CPO diets. The feed conversion ratio of the prawns was significantly better when fed the CO diet, compared with the FO, CPO, SFO and LO diets. The muscle eicosapentaenoic acid content of prawns fed the vegetable oil (VO) diets were not significantly different (P > 0.05) from those fed the FO diet, although all VO‐based diets led to a significantly lower docosahexaenoic acid content compared with prawns fed the FO or SLO diet. The whole‐body total carotenoid content was significantly lower for prawns fed the SLO diet compared with prawns on the CO or CPO diets. The successful use of VO instead of marine‐based oils in prawn diets will likely reduce feeding costs associated with M. rosenbergii aquaculture.     

Genetic parameters and correlated responses in female reproductive traits in the GIFT strain

The effect of selection for greater growth rate in the GIFT strain on traits related to female reproduction (weight at spawning, number of eggs, number of fry, total weight of fry and number of dead fry) was studied. Available records comprised 10 generations of data from a total of 935 breeding females with known pedigree. Female body weight at spawning was 255 g, whereas the averages for number of eggs, number of live fry at hatching, number of dead fry and total fry weight per spawning were 1444, 908, 64.90, and 7.24 g respectively. Heritabilities for reproductive traits were low to moderate (0.20 for number of eggs, 0.16 for number of hatched fry and 0.11 for fry weight per female at spawning). The genetic correlations between female body weight at spawning and reproductive traits were very low to low (0.01 to 0.31) and not significantly different from zero. The genetic correlations among reproductive traits (i.e. number of eggs, number of hatched fry and fry weight) were high (0.75 to 0.92). Phenotypic correlations were consistent with the genetic correlations, ranging from 0.56 to 0.85. Correlated responses in reproductive traits measured as differences in least squares means between Selection and Control lines were positive and significant (except for the number of dead fry) when age of females at spawning was fitted as a covariate. However, there were no significant differences in all studied traits when body weight of the female at spawning was fitted as a covariate within lines. This indicates that the greater reproductive rate was due to the greater size of females in the Selection line, but the efficiency of reproduction per unit weight of female did not change as a consequence of selection for growth.     

The ligase PIAS1 restricts natural regulatory T cell differentiation by epigenetic repression

CD4(+)Foxp3(+) regulatory T (T(reg)) cells are important for maintaining immune tolerance. Understanding the molecular mechanism that regulates T(reg) differentiation will facilitate the development of effective therapeutic strategies against autoimmune diseases. We report here that the SUMO E3 ligase PIAS1 restricts the differentiation of natural T(reg) cells by maintaining a repressive chromatin state of the Foxp3 promoter. PIAS1 acts by binding to the Foxp3 promoter to recruit DNA methyltransferases and heterochromatin protein 1 for epigenetic modifications. Pias1 deletion caused promoter demethylation, reduced histone H3 methylation at Lys(9), and enhanced promoter accessibility. Consistently, Pias1(-/-) mice displayed an increased natural T(reg) cell population and were resistant to the development of experimental autoimmune encephalomyelitis. Our studies have identified an epigenetic mechanism that negatively regulates the differentiation of natural T(reg) cells.     

Discovery of single nucleotide polymorphism in <Emphasis Type="Italic">Capsicum</Emphasis> and SNP markers for cultivar identification

Molecular markers based on single nucleotide polymorphisms (SNPs) are abundant and evenly distributed in a whole genome enough to distinguish individuals in a population. In recent years, sets of SNP markers have been designed and applied for cultivar identification in various crop species. This paper is the first to report the development of a panel of SNP markers for variety identification in peppers. We used conserved ortholog set II (COSII) markers developed from conserved unigenes between tomato and Arabidopsis to identify SNPs in peppers. We tested 438 COSII primer sets amplified as single PCR products out of a total 600 COSII primer sets. Among the 438 COSII primers, 170 primer sets (38.8%) showed polymorphisms between Capsicum annuum ‘RNaky (RN)’and C. chinense ‘PI 159234 (234)’. In contrast, only 48 primer sets (11.0%) out of 438 primers sets were polymorphic between C. annuum ‘Perennial (PER), and ‘Dempsey (DEMP)’. The average frequency of SNPs plus InDels between C. annuum and C. chinense was 1/189 bp and between C. annuum spp. was 1/948 bp. Primer sets showing SNP between C. annuum PER and DEMP were re-designed to Allele Specific PCR (AS-PCR) primers and we finally selected a total of 40 SNP markers for cultivar identification. As the result, we were able to discriminate 97.5% of the 81 commercial hot cultivars and 100% of the 17 sweet pepper cultivars. We conclude the paper by discussing the use of the SNP marker set for cultivar identification and other applications.     

Exploring the Correlation of Particulate PAHs, Sulfur Dioxide, Nitrogen Dioxide and Ozone, A Preliminary Study

The correlation of particulate PAHs, sulfur dioxide, nitrogen dioxide and ozone were examined. The pollution scenario of particulate PAHs, sulfur dioxide, nitrogen dioxide and ozone is also briefly presented as supplementary information. Both sulfur dioxide and nitrogen dioxide were found to have significant positive correlations with total particulate PAHs as well as with most individual PAH species studied, suggesting they mostly share the same common emission source and transportation pattern. On the other hand, ozone was observed to selectively have a strong negative correlation with several PAH species, namely BgP, BaP, BaA, Pyr and Ace, probably due to the ozonolysis reaction of these species.