The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes

Wood is a major pool of organic carbon that is highly resistant to decay, owing largely to the presence of lignin. The only organisms capable of substantial lignin decay are white rot fungi in the Agaricomycetes, which also contains non-lignin-degrading brown rot and ectomycorrhizal species. Comparative analyses of 31 fungal genomes (12 generated for this study) suggest that lignin-degrading peroxidases expanded in the lineage leading to the ancestor of the Agaricomycetes, which is reconstructed as a white rot species, and then contracted in parallel lineages leading to brown rot and mycorrhizal species. Molecular clock analyses suggest that the origin of lignin degradation might have coincided with the sharp decrease in the rate of organic carbon burial around the end of the Carboniferous period.     

Dimethylformamide Improves the In vitro Characteristics of Thawed Stallion Spermatozoa Reducing Sublethal Damage

A total of 42 ejaculates were used in the experiment; six ejaculates per stallion, obtained from seven Pure Spanish stallions (PRE), were split and frozen in freezing media with different concentrations and combinations of cryoprotectant (CPA): (i) Cáceres (skim milk based extender) containing 2.5% glycerol (2.5GL), (ii) Cáceres containing 1.5% glycerol and 1.5% dimethylformamide (1.5%GL–1.5%DMFA), (iii) Cáceres extender supplemented with 1.5% glycerol and 2.5% dimethylformamide (1.5%GL–2.5%DMFA) and (iv) Cáceres extender supplemented with 4% dimethylformamide (4%DMFA). After at least 4 weeks of storage in liquid nitrogen (LN), straws were thawed and semen analysed by computer‐assisted sperm analysis and flow cytometry (membrane lipid architecture (Merocyanine 540), integrity and sublethal damage (YoPro‐1) and mitochondrial membrane potential (JC‐1)). After thawing, better results were observed in samples frozen in 4%DMFA or in combinations of 1.5%GL–2.5%DMFA, in fact total motility increased by 16% in the 4%DMFA group compared to 2.5%GL (P < 0.05). Also, there was an increment in the percentage of progressive motile sperm in the 1.5%GL–2.5%DMFA group (9.8% 2.5GL vs 19% in the 1.5%GL–2.5%DMFA group p < 0.05); also, samples frozen in the 4%DMFA group had more intact (YoPro‐1 negative) sperm post‐thawing, 29.3% in 2.5%GL vs 36.7% in 4%DMFA group (p < 0.05). Membrane lipid architecture was not affected by any of the cryoprotectants tested, while samples frozen in 4%DFMA had a lower percentage of mitochondria with lower membrane potential. It is concluded that DMFA improves the outcome of cryopreservation of stallion spermatozoa mainly reducing sublethal cryodamage.     

Acute heat stress impairs performance parameters and induces mild intestinal enteritis in broiler chickens: role of acute hypothalamic-pituitary-adrenal axis activation

Studies on the environmental consequences of stress are relevant for economic and animal welfare reasons. We recently reported that long-term heat stressors (31 ± 1°C and 36 ± 1°C for 10 h/d) applied to broiler chickens (Gallus gallus domesticus) from d 35 to 42 of life increased serum corticosterone concentrations, decreased performance variables and the macrophage oxidative burst, and produced mild, multifocal acute enteritis. Being cognizant of the relevance of acute heat stress on tropical and subtropical poultry production, we designed the current experiment to analyze, from a neuroimmune perspective, the effects of an acute heat stress (31 ± 1°C for 10 h on d 35 of life) on serum corticosterone, performance variables, intestinal histology, and peritoneal macrophage activity in chickens. We demonstrated that the acute heat stress increased serum corticosterone concentrations and mortality and decreased food intake, BW gain, and feed conversion (P < 0.05). We did not find changes in the relative weights of the spleen, thymus, and bursa of Fabricius (P > 0.05). Increases in the basal and the Staphylococcus aureus-induced macrophage oxidative bursts and a decrease in the percentage of macrophages performing phagocytosis were also observed. Finally, mild, multifocal acute enteritis, characterized by the increased presence of lymphocytes and plasmocytes within the lamina propria of the jejunum, was also observed. We found that the stress-induced hypothalamic-pituitary-adrenal axis activation was responsible for the negative effects observed on chicken performance and immune function as well as for the changes in the intestinal mucosa. The data presented here corroborate with those presented in other studies in the field of neuroimmunomodulation and open new avenues for the improvement of broiler chicken welfare and production performance.     

Biological control of goat gastrointestinal helminthiasis by Duddingtonia flagrans in a semi-arid region of the northeastern Brazil

The aim of this study was to test a pellet formulation in a sodium alginate matrix of Duddingtonia flagrans in the biological control of goat gastrointestinal helminths kept in a native pasture in a semi-arid region of Paraíba state, northeastern Brazil. An area of 2.4 ha was divided into three paddocks, where groups of seven goats ware formed. Each group received the following treatments during the months of March to August 2011: D. flagrans group, received 3g of pellets containing D. flagrans (AC001) for each 10 kg/l.w., twice a week; Moxidectin 0.2% group, received 0.2mg/kg of Moxidectin 0.2% orally, every 30 days; Control group, received 3g of pellets without fungi per 10 kg/l.w., twice a week. Each month, a tracer goat was placed in each group for 30 days and then sacrificed and necropsied. The D. flagrans group showed a greater reduction in EPG, increased weight gain, higher rates of packed cell volume and lower parasitic load burden in the tracer goats compared to Moxidectin 0.2% and Control groups. D. flagrans was efficient in controlling goat gastrointestinal helminthiasis in a semi-arid region of northeastern Brazil.     

Identification of parasites in Puffinus puffinus (Birds, Procellariiformes) from Northeastern Brazil

Studies on the parasitic fauna of migratory sea birds of the Puffinus genus are scarce. Therefore, the aim of this study was to identify parasites of 16 specimens of Puffinus puffinus (Procellariiformes, Procellariidae) that died during the period of June 2011 to December 2011 at the Wildlife Screening Center (CETAS) of the Brazilian Institute of Environment and Natural Resources (IBAMA) in Cabedelo, Paraíba. During necropsy, biting lice and/or gastrointestinal helminths were collected in seven (43.7?%) birds. Lice were collected in five (31.2?%) birds, and the species identified were Halipeurus diversus, Trabeculus aviator, Austromenopon paululum), Saemundssonia sp. and Naubates sp. The prevalence of helminths was also 31.2?%. The nematodes species were Seuratia shipleyi and Contracaecum sp., and cestodes were Tetrabothrius sp. This is the first record in Brazil of Naubates sp., Seuratia shipleyi, Contracaecum sp., and Tetrabothrius sp. in Puffinus puffinus.     

Use of Artemisia annua as a natural coccidiostat in free-range broilers and its effects on infection dynamics and performance

This work investigated the preventive effect of Artemisia annua L. dried leaves supplied as a botanical coccidiostat to two broiler genotypes reared in a Danish free-range system in a factorial experiment (two genotypes and ± supplement of dried A. annua leaves). The genotypes White Bresse L40, a pure slow-growing line, and Kosmos 8 Ross, a hybrid genotype with medium growing characteristics, were used. Broilers were raised indoor until 29-days-old and kept free of parasites. Twelve groups of 30 randomly selected broilers were placed in the range forming three replicates for each treatment combination. The paddocks were cultivated with a mix of grass and clover. A separate group of broilers was naturally infected with Eimeria spp. oocysts and five animals nominated as "seeders" were introduced to the above mentioned 12 groups, 10 days after its formation, with each group consisting of 35 animals per plot. This infection strategy was meant to imitate the transmission pathway observed at farm level. Ten individual birds from each of the 12 groups, in total 120 animals of mixed sex, were monitored twice weekly for 30 days for oocysts excretion. PCR of pooled faecal samples, oocyst morphology and localization upon necropsy were used to identify the Eimeria species involved in the infection. In general, broilers from both genotypes in the range coped well with a coccidia infection caused by Eimeria acervulina and Eimeria maxima as no clinical symptoms, or deaths, were reported during the experiment. In general, broilers supplemented with A. annua dried leaves showed a significantly (p<0.05) reduced number of excreted oocysts during the infection with no interaction to genotype. Females generally had a significantly higher shedding of oocysts than males (p<0.05). The overall body weight gain and the daily weight gain when infection was subdued showed a three-way interaction among genotype, sex and treatment - accounted mainly for the fact that Kosmos females responded positively to the Artemisia treatment while Kosmos males responded negatively, and only minor differences were found between sexes for the White Bresse genotype. In conclusion, supply of A. annua dried leaves as a botanical coccidiostat significantly reduced oocyst output in free ranged broilers and thus may form part of a strategy to prevent commercial losses.     

Genetic control of resistance to Meloidogyne incognita race 1 in the Brazilian common bean (Phaseolus vulgaris L.) cv. Aporé

The use of resistant cultivars is one of the best methods for nematode control and reduction of economic losses caused by these pathogens. Studies of inheritance of nematode resistance in common bean (Phaseolus vulgaris L.) are nonetheless scarce. The present paper reports on the estimation of genetic parameters associated with resistance to the root nematode Meloidogyne incognita race 1 in common beans. Two contrasting bean lines, ‘Aporé’ (P₁ = nematode resistant) e ‘Macarr?o Rasteiro Conquista’ (P₂ = susceptible), and the generations F₁ (P₁ × P₂), F₂ (P₁ × P₂), BC₁(P₁) = (F₁ × P₁) and BC₁(P₂) = (F₁ × P₂), were assessed 45 days after nematode inoculation, through a scale related to the number of eggs per gram of root tissue. Dominant genetic effects were inferior in magnitude to additive effects, indicating incomplete dominance of nematode resistance. Dominance was in the direction of increased nematode resistance (i.e., lower number of eggs per g root). Resistance to Meloidogyne incognita race 1 in common bean is under control of a single gene locus, with incomplete dominance of the resistance allele present in ‘Aporé’, but modifier genes affecting its expression appear to be present in the susceptible parent ‘Macarr?o Rasteiro Conquista’.     

Genetic resistance to powdery mildew in common bean

Powdery mildew can cause severe yield losses in bean crops. Limited information about resistance sources, and nature and inheritance of resistance are available to bean breeders and plant pathologist. Sources of resistance were searched in seedling tests under controlled conditions in 44 well-known genotypes and in a Spanish germplasm core collection consisting on 201 accessions. A 0–4 scale was used to describe the infection types (IT) observed. Only six out of the 245 evaluated genotypes showed a complete resistance (IT0) without visible symptoms on the leaves: Amanda, Belneb, Cornell 49242, Negro San Luis, Porrillo Sintetico and the local accession BGE003161. Inheritance of resistance was studied in F₂ and F_2:3 segregating populations. Observed reactions in the five segregating populations fitted to Mendelian ratios with different modes of inheritance. Results revealed that cultivar Porrillo Sintetico carries two dominant and independent resistance genes: one gene conferring complete resistance (IT0), and another gene conferring IT3, characterized by a moderate mycelial development on the leaves. Both genes show a dominant epistatic relationship. Inheritance of response to powdery mildew in cv. Cornell 49242 was similar to cv. Porrillo Sintetico although the correspondence with the genes described in Porrillo Sintetico was not established. Line X2776 carries one dominant gene conferring IT3, and shares this gene with cv. Porrillo Sintetico. In cv. Amanda, two complementary genes appear to be involved in resistance to this fungus. This information will be relevant for the implementation of breeding programs focused on the development of cultivars carrying genetic resistance to powdery mildew.     

Metabolic profiling in the roots of coffee plants exposed to the coffee root-knot nematode, Meloidogyne exigua

To understand the effect of nematode Meloidogyne exigua infestation on coffee plants, resistant and susceptible coffee seedlings were inoculated with second-stage juveniles of M. exigua, and root metabolites were studied for four time intervals at 0, 24, 48 and 96 h. During this important period for parasite establishment, the concentrations of phenols, carbohydrates, amino acids and alkaloids in the roots were measured, and hydrogen nuclear magnetic resonance spectra of the root extracts were used to identify and quantify other metabolites. One of the most striking changes was the concentration of fumaric acid on resistant plants, which varied from 59 μg g(of root)^?1 to 138 μg g(of root)^?1 during the first 24 h of the nematode inoculation. The same level of variation was observed much later (96 h) in susceptible plants. Similarly, formic and quinic acid concentrations increased more rapidly in the resistant plants compared to the susceptibles. Sucrose concentrations increased to 370 % in the first 48 h in the resistant plants but showed no significant variation in the susceptible plant. Besides, the concentration of alkaloids was much higher at 24 and 48 h in the susceptibles compared to the resistant plants. These results suggest that the higher production of sucrose as well as formic, fumaric and quinic acids, and the lower production of alkaloids by the resistant cultivar in the first 48 h after the nematode inoculation are associated with the resistance of coffee plants to M. exigua.