When structure means conservation: Effect of aggregate structure in controlling microbial responses to rewetting events

Rewetting events after a drought produce a pulse of soil respiration (the “Birch Effect”) that leads to a loss of carbon from soil, especially in Mediterranean ecosystems. Two main hypotheses have developed to explain the Birch effect: the “metabolic explanation”, based on the rapid consumption of intracellular osmolytes previously accumulated to survive to dry conditions, and the “physical explanation”, based on the consumption of carbon made accessible by physical destruction of internal structures of the soil.Here, we compared the respiration response of intact and crushed 9–4 mm aggregates from a California grassland soil under two different rewetting schemes: (1) successive short dry/wet events and (2) increased drought periods followed by a single rewetting. In intact aggregates, both microbial biomass and respiration rates were relatively stable through both experimental treatments. In crushed aggregates, through multiple short dry/wet cycles, both respiration rate and microbial biomass increased, while as drought length increased, biomass was unaffected but the magnitude of the following rewetting pulse increased. A mechanism that explains both these results is that crushing aggregates exposes occluded particular material that must be degraded into an immediately bioavailable form for microbes to take it up and metabolize it. Nitrification was generally higher in intact than crushed aggregates, suggesting the importance of physical association between nitrifiers and resources in regulating overall soil nitrification.This work suggests that physical processes are most important in driving respiration pulses through multiple rewetting cycles and that the physical association of organisms, substrates, and mineral particles are critical in controlling the functioning of the “microbial landscape”.     

The role of the exopolysaccharides in enhancing hydraulic conductivity of biological soil crusts

Biological soil crusts (BSCs) are highly specialized topsoil microbial communities commonly found in arid and semiarid environments, permeated by a polymeric matrix of polysaccharides. BSCs can in principle influence edaphic properties such as texture, pore formation and water retention, which in turn determine water distribution and biological activity in dry lands. This paper investigates the influence of biotic and abiotic factors on BSC hydraulic conductivity, a parameter gauging the ease with which water can move through the pore spaces. Texture, phototroph abundance, microbial composition, and extracellular carbohydrate content were considered as potentially relevant parameters in a correlational study of BSC samples that spanned 1.5 orders of magnitude in hydraulic conductivity. A newly developed, non-destructive extraction method enabled us to directly quantify the specific role of extracellular polysaccharides on soil permeability on a variety of samples. Hydraulic conductivity showed a strongest correlation with texture (positive with sand content, negative with silt and clay). A weaker negative correlation with carbohydrate content, especially with polysaccharides having a molecular weight < 100 kDa, was also detected. In multiple regression analyses texture (silt content) was sufficient to explain most of the variation in hydraulic conductivity However, experimental removal of polymeric carbohydrates, resulted invariably in a substantial decrease in hydraulic conductivity for any given sample (between 1.7 and 3.3 fold). Our results suggest that while soil texture determines overall hydraulic conductivity in BSCs, the presence of exopolysaccharides can significantly enhance it, likely by conferring a spongy structure to a BSC thus increasing the number of waterways within it.     

Geographical pattern and ploidy levels of the weed Solanum elaeagnifolium (Solanaceae) from Argentina

A total of 106 samples taken from natural Argentinean populations of the weedy Solanum elaeagnifolium (subgenus Leptostemonum) were studied cytologically to understand the impact of the different ploidy levels in its distribution and origin. Classical Feulgen staining was employed to determine mitotic chromosome numbers in all samples. 2C nuclear DNA content was determined by means of PI flow cytometry in eight samples of different ploidy levels. Principal component analysis and GIS tools were employed to compare altitude, annual precipitation and annual mean temperature among accessions. Three cytotypes were found: diploid (2n?=?24) which is widespread, tetraploid (2n?=?48) centered in western and southern Argentina, and hexaploid (2n?=?72) which predominates in central Argentina extending as well to the east. The annual precipitation is significantly different between tetraploids and hexaploids. Cx-values ranged from 1.231 to 1.275?pg, with statistical differences (of about 24.5–50.9?Mbp, p?≤?0.05) among accessions. Diploids are the most widespread cytotype and have adapted to a number of very different habitats. Tetraploids live in arid or semi-arid regions with a mean annual rainfall less than 500?mm. Hexaploids are successful in colonizing wetter areas, where no tetraploids were found. Thus, the distribution of cytotypes may be associated with habitat differences, particularly soil moisture. The observed cytotype pattern and the differences in DNA content suggest multiple places of origin for the polyploidy of S. elaeagnifolium in Argentina.     

Leaf and ecosystem response to soil water availability in mountain grasslands

Climate change is expected to affect the Alps by increasing the frequency and intensity of summer drought events with negative impacts on ecosystem water resources. The response of CO₂ and H₂O exchange of a mountain grassland to natural fluctuations of soil water content was evaluated during 2001-2009. In addition, the physiological performance of individual mountain forb and graminoid plant species under progressive soil water shortage was explored in a laboratory drought experiment. During the 9-year study period the natural occurrence of moderately to extremely dry periods did not lead to substantial reductions in net ecosystem CO₂ exchange and evapotranspiration. Laboratory drought experiments confirmed that all the surveyed grassland plant species were insensitive to progressive soil drying until very low soil water contents (<0.01 m³ m⁻³) were reached after several days of drought. In field conditions, such a low threshold was never reached. Re-watering after a short-term drought event (5 ± 1 days) resulted in a fast and complete recovery of the leaf CO₂ and H₂O gas exchange of the investigated plant species. We conclude that the present-day frequency and intensity of dry periods does not substantially affect the functioning of the investigated grassland ecosystem. During dry periods the observed “water spending” strategy employed by the investigated mountain grassland species is expected to provide a cooling feedback on climate warming, but may have negative consequences for down-stream water users.     

Evaluation of red chicory extract as a natural antioxidant by pure lipid oxidation and yeast oxidative stress response as model systems

The search for renewable and abundant sources of antioxidants has recently focused on agricultural byproducts, especially promising due to their natural origins and low costs. In particular, plant raw materials are sources of important compounds such as dietary fiber, carotenoids, tocopherols, and polyphenolics, which are mostly discarded during harvesting and processing. Among these vegetal crops, red chicory is attractive because of the large quantity of its byproducts (residues as leaves and stems); moreover, there is no information on its role as a food and feed ingredient. In this study, red chicory leaf residue was evaluated as a natural substitute for synthetic antioxidants for the food and feed industry. After lyophilization, a red chicory extract (RC) was characterized for its phenolic profile and its oxidative stability as compared to BHT. RC was shown to reduce lipid peroxidation of different oils in the Rancimat test. In addition, the antioxidant property of RC was studied in a model system by evaluating the Saccharomyces cerevisiae response to oxidative stress by means of gene expression. In this analysis, the RC extract, added to the yeast culture prior to oxidative stress induction, exhibited a pleiotropic protective effect on stress responsive genes.     

Use of near infrared reflectance and transmittance coupled to robust calibration for the evaluation of nutritional value in naked oats

A rapid accurate and precise method for simultaneous determination of β-glucan and protein content in naked oat samples, based on the coupling of near-infrared spectroscopy and chemometrics, is presented. In particular, three different spectroscopic approaches [near infrared reflectance (NIR) and transmittance (NIT) on flour and NIT on whole grains] and various spectral pretreatments were considered. To account for the possibility of outlying samples, a robust version of the PLS algorithm (namely partial robust M-regression) was used. All the models resulted as accurate as the reference methods, reflectance spectroscopy being the technique providing the best outcomes. Variable reduction by inclusion of the most relevant predictors only (as evaluated by VIP scores) resulted in simpler and, in one case, more parsimonious models, without loss in accuracy.