Resolving the urban nest predator paradox: The role of alternative foods for nest predators

Urbanization is a leading cause of species endangerment in the United States; however, certain species thrive in urban habitats. The loss of key predators or the addition of new predators in urban areas could alter the structure of urban communities. A reduction in nest predation is hypothesized to explain the high density of urban birds, yet urban areas typically have increased populations of avian nest predators. The loss of important nest predators in urban habitats, prey switching of urban predators, or successful nest defense against avian nest predators could explain this urban nest predator paradox. To assess these hypotheses I compared nest predation rates of Northern mockingbirds (Mimus polyglottos) in parking lots and residential neighborhoods to populations in pastures and wildlife preserves during 2007–2009 in Florida, USA and placed video cameras on a subset of nests in 2008–2009. Data do not support the hypothesis that urban nest predation rates are consistently lower than non-urban nest predation rates. Of the 56 nest predation events recorded, cats were the dominant urban predator and Cooper’s hawks (Accipiter cooperii) were the dominant non-urban predator. There was no evidence for a loss of important nest predators in urban habitats; however, prey switching by Cooper’s hawks likely occurred. There was also indirect evidence for the importance of nest defense. Furthermore, some of the cats recorded as nest predators in residential neighborhoods were owned cats and all but one cat predation event occurred at night. To reduce nest predation rates, cat owners should keep their cats indoors at night.     

Bioaccumulation of melamine in catfish muscle following continuous, low-dose, oral administration

In this study, catfish muscle was analyzed for melamine (MEL) and cyanuric acid (CYA) residues following experimental feeding with low doses of MEL and MEL and CYA (MEL+CYA) and with the insoluble melamine-cyanurate complex (MEL=CYA). Catfish were daily fed 0.1 mg/kg BW of MEL for 15, 28, or 42 days, 0.1 mg/kg BW of MEL+CYA for 28 days, 2.5 mg/kg BW of MEL+CYA for 14 days, or 400 mg/kg BW of MEL=CYA for 3 days. Residues in the tissue were determined by LC-MS/MS. MEL was extracted with acidic acetonitrile, followed by defatting with dichloromethane, and isolated with cation exchange solid phase extraction (SPE). For CYA analysis, fish were extracted with dilute acetic acid, defatted with hexane, and cleaned up with a graphitic carbon SPE. Catfish fed 0.1 mg/kg BW of MEL reached a maximum muscle residue concentration of 0.33 ± 0.04 mg/kg (ppm) after 28 days of continuous feeding. The same concentration was found for MEL+CYA feeding at the 0.1 mg/kg BW level for 28 days. Feeding at 2.5 mg/kg BW of MEL+CYA yielded muscle concentrations above the 2.5 mg/kg level of concern for most of the study fish. Finally, catfish fed high levels of the MEL=CYA complex (400 mg/kg BW) accumulated relatively little MEL in the muscle (0.14 ± 0.07 mg/kg) and, unlike treatment with MEL+CYA, did not form renal melamine-cyanurate crystals. Appreciable concentrations of CYA were not detected in any of the muscles tested. These studies provide data to model the bioaccumulation of triazine residues into edible fish tissue as a result of the continuous consumption of adulterated feed.     

Denitrification potential of intermittently saturated floodplain soils from a subtropical perennial stream and an ephemeral tributary

Denitrification has the potential to remove excess nitrogen from groundwater passing through riparian buffers, thus improving water quality downstream. In regions with markedly seasonal precipitation, transient stream flow events may be important in saturating adjacent floodplain soils and intermittently providing the anaerobic conditions necessary for denitrification to occur. In two experiments we characterised the denitrification potential of soils from two contrasting floodplains that experience intermittent saturation. We quantified under controlled laboratory conditions: 1) potential rates of denitrification in these soils with depth and over time, for a typical period of saturation; and 2) the influences on rates of nitrate and organic carbon. Treatments differed between experiments, but in each case soil-water slurries were incubated anaerobically with differing amendments of organic carbon and nitrate; denitrification rates were measured at selected time intervals by the acetylene-block technique; and slurry filtrates were analysed for various chemical constituents. In the first experiment (ephemeral tributary), denitrification was evident in soils from both depths (0-0.3 m; 0.3-1.1 m) within hours of saturation. Before Day 2, mean denitrification rates at each depth were generally comparable, irrespective of added substrates; mean rates (Days 0 and 1) were 5.2 ± 0.3 mg N kg dry soil⁻¹ day⁻¹ (0-0.3 m) and 1.6 ± 0.2 mg N kg dry soil⁻¹ day⁻¹ (0.3-1.1 m). Rates generally peaked on Days 2 or 3. The availability of labile organic carbon was a major constraint on denitrification in these soils. Acetate addition greatly increased rates, reaching a maximum in ephemeral floodplain soils of 17.4 ± 1.8 mg N kg dry soil⁻¹ day⁻¹ on Day 2: in one deep-soil treatment (low nitrate) this overcame differences in rates observed with depth when acetate was not added, although the rate increase in the other deep-soil treatment (high nitrate) was significantly less (P ≤ 0.01). Without acetate, peak denitrification rates in this experiment were 6.9 ± 0.4 and 2.8 ± 0.2 mg N kg dry soil⁻¹ day⁻¹ in surface and deep soils, respectively. Differences in rates were observed with depth on all occasions, despite similar initial concentrations of dissolved organic carbon (DOC) at both depths. Levels of substrate addition in the second experiment (perennial stream) more closely reflected natural conditions at the site. Mean denitrification rates were consistently much higher in surface soil (P ≤ 0.001), while the source of water used in the slurries (surface water or groundwater from the site) had little effect on rates at any depth. Mean rates when all treatments retained nitrate were: 4.5 ± 0.3 mg N kg dry soil⁻¹ day⁻¹ (0-0.3 m depth); 0.8 ± 0.3 mg N kg dry soil⁻¹ day⁻¹ (0.3-1.0 m); and 0.6 ± 0.1 mg N kg dry soil⁻¹ day⁻¹ (1.8-3.5 m). For comparable treatments and soil depths, denitrification potentials at both sites were similar, apart from higher initial rates in the ephemeral floodplain soils, probably associated with their higher DOC content and possibly also their history of more frequent saturation. The rapid onset of denitrification and the rates measured in these soils suggest there may be considerable potential for nitrate removal from groundwater in these floodplain environments during relatively short periods of saturation.     

Formation of Maillard reaction products during heat treatment of carrots

As indicators of the early stage of the Maillard reaction in carrots, N-(furoylmethyl) amino acids (FMAAs) formed during acid hydrolysis of the corresponding Amadori products were analyzed using RP-HPLC with UV detection. N(ε)-FM-Lys (furosine), FM-Gly, FM-Ala, FM-Val, FM-Ile, FM-Leu, and FM-GABA were identified using synthesized standard material by means of mass spectrometry. Furthermore, N(ε)-carboxymethyllysine (CML) and pyrraline were analyzed as indicators for advanced stages of glycation. For commercial samples with high water content, the formation of Amadori compounds predominates, whereas the advanced stage of Maillard reaction plays only a minor part. Carrot juices, baby food, and tinned carrots showed quite low rates of amino acid modification up to 5%. For dehydrated carrots, significantly higher values for Amadori products were measured, corresponding to a lysine derivatization of up to 58% and nearly 100% derivatization of GABA. Drying experiments revealed great differences in reactivity between the amino acids studied. Whereas furosine reached constant values quite quickly, some FMAAs showed a continuous increase with heating time, indicating that selected FMAAs can be used as a hallmark for the early Maillard reaction to control processing conditions.     

Silencing of host basal defense response-related gene expression increases susceptibility of Nicotiana benthamiana to Clavibacter michiganensis subsp. michiganensis

Clavibacter michiganensis subsp. michiganensis is an actinomycete, causing bacterial wilt and canker disease of tomato (Solanum lycopersicum). We used virus-induced gene silencing (VIGS) to identify genes playing a role in host basal defense response to C. michiganensis subsp. michiganensis infection using Nicotiana benthamiana as a model plant. A preliminary VIGS screen comprising 160 genes from tomato known to be involved in defense-related signaling identified a set of 14 genes whose suppression led to altered host-pathogen interactions. Expression of each of these genes and three additional targets was then suppressed in larger-scale VIGS experiments and the effect of silencing on development of wilt disease symptoms and bacterial growth during an N. benthamiana-C. michiganensis subsp. michiganensis compatible interaction was determined. Disease susceptibility and in planta bacterial population size were enhanced by silencing genes encoding N. benthamiana homologs of ubiquitin activating enzyme, snakin-2, extensin-like protein, divinyl ether synthase, 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2, and Pto-like kinase. The identification of genes having a role in the host basal defense-response to C. michiganensis subsp. michiganensis advances our understanding of the plant responses activated by C. michiganensis subsp. michiganensis and raises possibilities for devising novel and effective molecular strategies to control bacterial canker and wilt in tomato.     

Colluvisols under cultivation in Schleswig-Holstein. 2. Carbon distribution and soil organic matter composition

Soils under intensive cultivation have altered due to water erosion. This study was conducted to determine whether soil organic matter (SOM) composition of the colluvial source (Ap horizons) differs from the colluvial sink (M horizons). The SOM of a sandy Catena with erodic Cambisols and colluvic soils (Colluvisols) in Schleswig-Holstein, Northwest Germany, was investigated. A wet chemical analysis was combined with CPMAS ¹³C-NMR spectroscopy. In one case a significant correlation between the SOM composition of the Ap horizon of the erodic Cambisol and the M horizon of the Colluvisol was high (r² = 0.904^-), whereas the correlation for the other set was much weaker (r² = 0.640*). Two possible paths of pedogenesis are discussed. About 70% of the SOM of the colluvial source is decomposed during translocation or after deposition. A selective preservation or new formation of humins in the M material is probable. These humins contain, obviously, large amounts of polysaccharides, which were not detected by the wet chemical analysis. Further investigations of colluvic and erodic soils are necessary in order to specify the SOM quality and its possible modification due to soil translocation and accumulation.     

Hemolytic anemia and induction of phase II detoxification enzymes by diprop-1-enyl sulfide in rats: dose-response study

Epidemiological evidence indicates that a high dietary intake of plants of the Allium family, such as garlic and onions, is associated with a decreased risk of cancer in humans. It has been suggested that this chemopreventative effect involves the ability of the aliphatic sulfides derived from these vegetables to increase tissue activities of phase II detoxification enzymes. Several highly effective inducers from garlic have been identified, but most of the previously studied compounds from onion have proved to be only weakly active. In the present study, the inductive activity of another onion-derived sulfide, diprop-1-enyl sulfide, has been investigated. This substance was a potent inducer of phase II enzymes in rats, showing significant effects in the lungs and in the lower part of the gastrointestinal tract, suggesting that diprop-1-enyl sulfide could be a useful chemopreventative agent at these sites. At high dose levels, diprop-1-enyl sulfide caused hemolytic anemia, which may be due to in vivo conversion of the sulfide to active metabolites.     

Elucidation of membrane destabilization in post-mortem muscles using an extracellular paramagnetic agent (Gd-DTPA): an NMR study

The effect of Gd-DTPA on the development in NMR relaxation of skeletal rabbit muscles post-mortem was investigated by dynamic low-field (0.47 T) relaxation measurements from 4 min post-mortem and until 23 h post-mortem. Twelve rabbits were included in the study, and half of the animals were administered 0.2 mmol of Gd-DTPA iv 15 min before sacrifice, while the other half was administered an isotonic salt solution. A significant effect of Gd-DTPA treatment corresponding to a 25% reduction in the T(1) relaxation time was observed. T(2) relaxation was decomposed into two components reflecting intra- and extracellular components (T(2)()alpha and T(2)()beta, respectively), and Gd-DTPA treatment was found to affect both components. However, around 150 min post-mortem a dramatic increase in the difference between control and Gd-DTPA-treated rabbits was observed in the relaxation time of the intracellular water population (T(2)()alpha). Electrical stimulation of the muscles resulted in a significantly earlier onset of the increased effect of Gd-DTPA on the T(2)()alpha population. The increased effect of Gd-DTPA treatment on the T(2)()alpha component is believed to reflect leakage of water from the muscle cells due to membrane destabilization, known to be promoted by electrical stimulation. Accordingly, the present study demonstrates how Gd-DTPA can be used for probing membrane integrity in post-mortem muscles known to be of importance for subsequent water distribution and final water-holding capacity.     

The practical use of semiparametric models in field trials

This article examines the practical use of semiparametric models in the analysis of field trials—that is, models with parameterized treatment effects and additive terms derived by a data-driven approach using a locally weighted running line smoother (loess). We discuss graphical methods to identify spatial structure in the data and model selection procedures to choose the degree of smoothing. Once the spatial part of the model has been chosen, hypotheses about the treatment effects may be tested. Semiparametric models are used to analyze two barley field trials exhibiting spatial trends. The first has a single experimental treatment and a row-column design. The second has a split-plot design, and we use a semiparametric model which accounts for the randomization at the different strata of this design. We compare the semiparametric analyses with classical analyses of variance and with alternative spatial models. We find that semiparametric models give a good insight into spatial variation in the field and can improve the precision of parameter estimates.     

Predicting Reversibility of Acidification: The European Sulfur Story

Because of the deleterious effects of acid rain and the need to predict reversibility of acidification, various scientific tools such as modeling, stable isotopes and flux/budget calculations have been used in biogeochemical sulfur (S) research. The aim of this study was to evaluate consistencies and discrepancies between these different tools. While modeling has been seemingly successful in predicting S dynamics in soil solution and stream water by considering inorganic sulfate sorption and desorption only, stable S isotopes indicate that biological S turnover plays a crucial role for the sulfate released to soil solution and stream water. A comparison of budget calculations with soil S pools reveals that inorganic sulfate sorption and desorption are the controlling processes as long as deposition is high (> 15 kg S ha^?1yr^?1) and soils have a high sulfate sorption capacity. This explains the successful model predictions of the last two decades. However, for soils with low sulfate sorption capacity and under low sulfate deposition, organic S seems to be a significant source for stream water sulfate and has to be considered in future modeling.