Proteomic analysis by two-dimensional gel electrophoresis and starch characterization of Triticum turgidum L. var. durum cultivars for pasta making

Criteria for durum wheat quality are continuously evolving in response to market pressure and consumer's preference. Specific attributes of durum wheat for different end products require more rapid and objective means to grade and classify wheat parcels based on processing potential. A total of 10 durum wheat cultivars were compared for compositional, protein, and starch characteristics. Mean values for the gross composition differed for total protein, gluten, and starch. Two-dimensional electrophoresis (2DE) analysis showed the proteome diversity among the cultivars. As shown by the principal component analysis (PCA) applied to 2DE data of gliadin and glutenin fractions, cultivars differed mainly from the number of proteins and levels of protein expression. As determined by the rapid viscoanalyzer (RVA), swelling power, starch damage, amylose content, and starch pasting properties of 10 cultivars differed significantly. 2DE fingerprinting and amylose content seemed to distinguish specific cultivars being useful tools for selecting suitable durum wheat cultivars for pasta making.     

Glorious past, uncertain present, bad future? Assessing effects of land-use changes on habitat suitability for a threatened farmland bird species

Land-use changes have strong impacts on biological communities. Among them, land abandonment is threatening a large number of conservation-concern species associated with semi-natural habitats shaped by ‘traditional’ farming. We focused on the red-backed shrike as a model for investigating the effect of land abandonment on a threatened bird species, and used historical data to model dynamic scenarios. We explored variations in habitat suitability from the 1950s to the present and predicted possible future variations. After investigating local habitat preferences of the species, we formulated a spatially explicit model of habitat suitability for shrikes according to current land-use types; then, we evaluated past habitat suitability, by applying the model to three known past scenarios, and simulated the habitat changes after land abandonment. By combining a habitat-association approach with past and future land use scenarios, we assessed and predicted the effects of habitat changes caused by abandonment. Shrike occurrence was favoured by the cover of four types of grassland and of shrubland with trees, and negatively affected by broadleaved woodlands. The current average habitat suitability is less than half of what it was in the 1950s. Future predictions in a complete abandonment scenario suggest that important decrease could be expected 10 or 20 years after abandonment, and that after 30 years the red-backed shrike would be completely extinct. Alternative scenarios involving partial abandonment suggested that subsidy policies may mitigate the effects of abandonment. Knowing land-use dynamics allowed the exploration of effects of land-use changes and corroborated the importance of low-intensity farming for conservation.     

Use of Trichoderma spp. and arbuscular mycorrhizal fungi to increase soil beneficial population of bacteria in a nectarine commercial orchard: Effect on root growth,nutrient acquisition and replanting disease

The aim of the present experiment was to evaluate the effect of commercial Trichoderma and arbuscular mycorrhizal fungi (AMF)-based bio-fertilizers on nectarine root growth, nutrient acquisition and replanting disease. The experiment was performed from 2008 to 2012 in an A. mellea-infected nectarine orchard subjected to the following treatments: 1) untreated control; 2) AMF-biofertilizer applied at planting (120 kg ha^?1) and every year in spring and autumn at the rate of 6 kg ha^?1; 3) Trichoderma spp applied at planting (5 g plant^?1) and every year (in April, May and September) at 2.5 kg ha^?1. AMF bio-fertilizers decreased root diameter and increased root survivorship. Leaf phosphorus concentration increased in AMF bio-fertilizers plots, while no significant treatments effects were observed on other leaf nutrient concentration. Although biofertilizer application did not affect soil microbial population, at the end of the trial (2012) the application of Trichoderma alone increased the population of the fungus.     

Quantitative determination of dietary lectin activities by enzyme-linked immunosorbent assay using specific glycoproteins immobilized on microtiter plates

An immunoenzymatic method for the quantitative determination of dietary lectin activities employing immobilized glycoproteins was studied. Lectins from wheat germ (WGA), peanut (PNA), and jack bean (ConA) were added to microtiter plates coated with ovalbumin or asialofetuin and quantified by enzyme-linked immunosorbent assay (ELISA) with lectin-specific antibodies. ELISA responses for lectin activity were dose-dependent in the concentration range 30-1000 ng/mL for WGA and 80-1000 ng/mL for both PNA and ConA. Inhibition assays carried out with different saccharides confirmed that the binding of lectins to immobilized glycoproteins was specific. The proposed method is specific and sensitive, allowing the quantitative determination of lectin activities on raw samples by simple dilution of the extracts. Examples of application to wheat germ and roasted peanut extracts are reported.     

Antinociceptive Activity of Stephanolepis hispidus Skin Aqueous Extract Depends Partly on Opioid System Activation

Stephanolepis hispidus is one of the most common filefish species in Brazil. Its skin is traditionally used as a complementary treatment for inflammatory disorders. However, there are very few studies on chemical and pharmacological properties using the skin of this fish. This study was undertaken in order to investigate the effect of aqueous crude extract of S. hispidus skin (SAE) in different nociception models. Here, we report that intraperitoneal administration of SAE inhibited the abdominal constrictions induced by acetic acid in mice. In addition to the effect seen in the abdominal constriction model, SAE was also able to inhibit the hyperalgesia induced by carrageenan and prostaglandin E2 (PGE2) in mice. This potent antinociceptive effect was observed in the hot plate model too, but not in tail-flick test. Naloxone, an opioid receptor antagonist, was able to block the antinociceptive effect of SAE in the abdominal constriction and hot plate models. In addition, SAE did not present cytotoxic or genotoxic effect in human peripheral blood cells. Our results suggest that aqueous crude extract from S. hispidus skin has antinociceptive activity in close relationship with the partial activation of opioid receptors in the nervous system. Moreover, aqueous crude extract from S. hispidus skin does not present toxicity and is therefore endowed with the potential for pharmacological control of pain.     

Regional habitat conservation priorities for the American crocodile

The American crocodile is widely distributed in coastal and lowland wetlands in the northern Neotropics. As a result of commercial skin hunting in the 20th century, populations were greatly diminished, but in many areas have initiated a period of recovery since hunting and trade controls were enacted in the 1980s and 1990s. While a great deal of attention has been devoted to regulated commercial use as a management strategy for recovering crocodilian populations, these approaches are limited in their efficacy to deal with issues of habitat loss and fragmentation. Because habitat limitations are expected to be the most critical issue for crocodile conservation in the 21st century, there is an unfulfilled need for alternative strategies that prioritize habitat conservation. Here, we present results of an international effort to identify and prioritize the most critical habitats for this wide ranging species. We quantified information of a group of American crocodile experts and classified 69 areas in eight distinct crocodile bioregions as Crocodile Conservation Units (CCU), the most important areas for the conservation of this species. The relative importance of the CCUs in each bioregion was quantified using an algorithm that weighted factors that the experts considered to be most important for the long term conservation of viable populations of crocodiles. This effort is the initial step in the development of a regional conservation plan for the American crocodile. We identified two bioregions in particular where the creation of protected areas should be given a high priority, the Dry Pacific South America (northern Peru and southern Ecuador) and the Northwest and Central Pacific Mexico.     

Activities of antioxidant enzymes and photosynthetic responses in tomato pre-treated by plant activators and inoculated by Xanthomonas vesicatoria

The activities of antioxidant enzymes and photosynthetic responses were investigated in tomato (Lycopersicon esculentum L. var.) pre-treated by plant activators and inoculated by Xanthomonas vesicatoria. Plants were sprayed with acibenzolar-S-methyl, ASM [Bion^® 50 WG (0.2 g l⁻¹)] and aqueous extract from dry necrotic tissue flour (VLA) of ‘Lobeira’ (Solanum lycocarpum) bush. Four days later, the plants were challenged with a virulent strain of X. vesicatoria, under greenhouse conditions. Tomato leaves were then assessed to determine the activities of the main antioxidant enzymes: superoxide dismutase (SOD), catalase (CAT), peroxidase (POX), and ascorbate peroxidase (APX). A reduction of bacterial leaf spot severity was observed in plants treated by ASM (49.3%) and VLA (31.4%), without any in vitro inhibitory activity over the pathogen. Controls showed decreases in CO₂ assimilation, transpiration, photosynthetic rates, and stomatal conductance. Water use efficiency and carboxylation efficiency were strongly affected in ASM- and VLA-treated, in comparison to controls and healthy plants. The tested substances induced increases in SOD and CAT activities in a delayed enzymatic response typical in compatible plant–pathogen interactions. Measured at daily intervals, activities of APX and POX were significantly (ρ0.05) higher in treated plants than in controls, except for APX in ASM-treated plants where no difference was found when compared to controls. Only POX was clearly induced at the earlier stages after spraying the tomato plants with ASM or VLA. Our results suggest that late increases in antioxidant enzyme activities may play a role in mitigating oxidative damage in restoring the photosynthetic imbalance imposed by the expansion of bacterial lesions.     

Effects of water deficit on the vegetative response,yield and oil quality of olive trees (Olea europaea L., cv Coratina) grown under intensive cultivation

An experiment was carried out in a young high-density olive grove (556 plants ha⁻¹—Olea europaea L., cv Coratina) located in Southern Italy to evaluate the effect of different soil water availability on the vegetative and productive performances of olive trees also looking into the quality of the resulting oils. Trials were carried out over a 3-year period on trees subjected to irrigation and grown under rainfed conditions. Vegetative tree response, as shoot elongation and trunk diameter, was evaluated. Yield per plant, fruit characteristics, oil quality indices (free fatty acid content, peroxide value, UV adsorption at 232 and 270 nm, total phenols, α-tocopherol content) were determined for both irrigated and non-irrigated treatments in the ‘on’ years 1997 and 1999 (6th and 8th year after planting, respectively).     

Relation of acid-volatile sulfides (AVS) with metals in sediments from eutrophicated estuaries: Is it limited by metal-to-AVS ratios?

Purpose

The role of acid-volatile sulfide (AVS) as a factor affecting (or reflecting the environmental conditions influencing) the behavior of metals has been evidenced in anoxic sediments. However, sediment quality studies tend not to consider any potential AVS role when sum of simultaneously extracted metal (ΣSEM) concentrations exceed AVS concentrations, restricting the application of the AVS model to predict toxicity, rather than coupling this model (when applicable) with other possible interpretations of metal–AVS relations.

Materials and methods

The relations between total organic carbon (TOC), AVS, and simultaneously extracted Fe, Cd, Cu, Ni, Pb, and Zn were investigated in sediment cores from two eutrophicated estuaries in Guanabara Bay (SE Brazil) in order to contribute to our understanding about metal–AVS relations in conditions of variable ΣSEM and AVS levels, due to gradients of eutrophication and metal contamination.

Results and discussion

Correlation analyses indicated a more important role of TOC, AVS, and Fe in the mechanisms affecting trace metal distribution in the less eutrophicated estuary. This suggests that AVS was a more important binding phase, or at least a better proxy for biogeochemical conditions affecting metal distribution, when it exceeds the sum of simultaneously extracted Cd, Cu, Ni, Pb, and Zn concentrations (ΣSEM). However, this potential role of AVS in anoxic estuarine sediments should not be discarded before evaluating individual metals–AVS relations even when ΣSEM levels exceed AVS levels, since the biogeochemical controls on the behavior of individual metals may be also related to metal–AVS associations in this situation (as indicated for Cu and Ni in the more eutrophicated estuary). The same is suggested for all AVS-based approaches, such as the (ΣSEM???AVS)/f _OC (organic carbon normalization of excess ΣSEM), since (ΣSEM???AVS)/f _OC values were mostly positive and significantly higher in the more eutrophicated estuary.

Conclusions

Although the importance of metal relations to AVS in evaluating individual metal behavior in anoxic estuarine sediments may not be restricted to situations in which AVS levels exceed ΣSEM levels (as observed for Ni and Cu in the present study), metal–AVS relations were apparently favored in this situation. Approaches in this way are recommended for future research, coupling the possibilities of metal behavior interpretations (and often predictions) allowed by AVS models.     

Metabolic changes of Malvasia grapes for wine production during postharvest drying

Malvasia (Vitis vinifera L.) grapes were harvested at 17.8% of soluble solids content (SSC) and placed inside an innovative dehydration room where temperature, relative humidity, and air flow were maintained, respectively, at 15 degrees C, 40%, and 1-1.5 m s(-1). Weight loss of bunches reached approximately 33% in 29 days. SSC increased inversely proportionally with the weight decrease, reaching at the end of experiment 23%. Abscisic acid (ABA) increased rapidly from around 29 to 80 microg g(-1) of dry weight at 11.7% of bunch weight loss and then declined gradually. Lipoxygenase (LOX) showed the same behavior as ABA, whereas alcohol dehydrogenase (ADH), read in the way of ethanol oxidation, increased continuously when the weight loss reached approximately 19.5%. In parallel with the activity of LOX, C6 compound [hexanal, hex-1-enol, (E)-hex-2-enal] concentrations reached a peak at 11.7% of weight loss, whereas ethanol and acetaldehyde increased with the increase of ADH and successively decrease and ethyl acetate increased. Proline increased initially as ABA and successively with the increase of ADH, 5.3-fold increase versus 4.2-fold increase of proteins. Postharvest dehydration of Malvasia grapes shows a biphasic pattern: a first metabolic stress response up to 11.7% of bunch weight loss and a second stress response beyond 19.5% of weight loss. The metabolic mechanism of these postharvest water stress responses is discussed.