High prevalence of viruses in table grape from Spain detected by real-time RT-PCR

Table grapes from one of the most important growing area in Spain (Vinalopó, Alicante) protected by the Designation of Origin “Vinalopó bagged table grape”, were surveyed and analysed to determine the prevalence of the five viruses included in the Spanish certification program: Arabis mosaic virus (ArMV), Grapevine fanleaf virus (GFLV), Grapevine fleck virus (GFkV), Grapevine leafroll associated virus-1 (GLRaV-1) and Grapevine leafroll associated virus-3 (GLRaV-3). Ninety five sampling points were selected and the position of grapevine plants georeferenced. Samples were collected in two different vegetative periods and analyses were performed by ELISA and real-time RT-PCR. Purified RNA and immobilized viral targets from plant extracts on nylon membranes were used in parallel assays as templates for PCR assays. In order to analyse these five viral species by real-time RT-PCR, new specific primers and TaqMan probes were designed for detection of ArMV and GFkV. Real time RT-PCR from purified RNA was more sensitive than spot version and ELISA tests. The most prevalent virus was GFLV (95.8%) followed by GLRaV-3 (94.7%), GLRaV-1 (66.3%) and GFkV (65.3%). ArMV was not detected in any sample. The high level of viral infections and the presence of mixed infections suggest that initial infected plant material and uncontrolled traffic of propagation material have played an important role in the spread of viruses.     

Efficacy and dose–response relationship in biocontrol of Fusarium disease in maize by Streptomyces spp.

Two isolates of Streptomyces spp. DAUFPE 11470 and DAUFPE 14632 were evaluated to determine the antagonist–pathogen inoculum concentration relationship under greenhouse conditions. Pathogen and antagonist concentration, significantly (P < 0.05) affected development of Fusarium disease in maize with a significant interaction between pathogen and antagonist concentration. Dose–response relationship also differed significantly (P < 0.05) between the two isolates, but both isolates demonstrated effective control of Fusarium disease, regardless of pathogen concentration. The isolate DAUFPE 11470 provided the most effective control. The lowest value for disease incidence occurred at low pathogen (10³ chlamydospore g⁻¹ soil) and high antagonist concentration (10⁶ cfu ml⁻¹) for both isolates. The disease incidence for control plants ranged from 19% to 76%. However, in relation to control the lowest disease reduction occurred at low pathogen (10³ chlamydospore g⁻¹ soil) and high antagonist concentrations (10⁶ cfu ml⁻¹). These reductions were 10.6% and 13% for DAUFPE 14632 and DAUFPE 11470, respectively. The highest disease reductions, in relation to control plants, occurred at high pathogen (10⁶ chlamydospore g⁻¹ soil) and antagonist (10⁶ cfu ml⁻¹) concentrations for both isolates. These values were 55% and 62.2% for DAUFPE 14632 and DAUFPE 11470, respectively. The chlamydospore germination of Fusarium moniliforme was affected by glucose addition, antagonist isolates and type of inoculum. The lowest chlamydospore germination was observed with bacterial suspensions of the isolates, for all glucose additions. The results suggested that both Streptomyces spp. isolates were effective at different doses as biocontrol agents against F. moniliforme. Also, there was evidence for at least two mechanisms of biocontrol and that apparently, both isolates showed the same mechanisms of biocontrol action related to production of bioactive compounds and competition for carbon. Further studies will be developed to improve the level and effectiveness of control by these isolates.     

Survival of seeds from perennial biomass species during commercial‐scale anaerobic digestion

Tall perennial grass species can be utilised as bioenergy feedstocks, but some are considered invasive species. Using biomass from such species as feedstocks for anaerobic digestion (AD) may introduce the risk of disseminating viable seeds onto agricultural lands during digestate application. To evaluate this risk, we investigated the survival rates of perennial grass seeds obtained from biomass species during AD. After removal from the digester, seeds were germinated and stained with tetrazolium chloride to determine viability. During three experimental runs, batches of 100 seeds from four species were exposed to 0, 2, 6, 12, 24, 48, 72 and 168 h of mesophilic (38°C) AD within a commercial‐scale digester. Seed viability of Phalaris arundinacea, Phragmites australis, Panicum virgatum and Solanum lycopersicum was reduced by 95% (LT₉₅) after 29, 52, 98 and 105 h of AD respectively. Commercial digesters that utilise perennial grasses as a feedstock typically have retention times ranging from 240 to 1480 h, which greatly exceeds the LT₉₅ values found in this study. Anaerobic digestion resulted in the rapid death of seeds in all species tested, suggesting unwanted dissemination of perennial grass species via digestate application to agricultural land is unlikely.     

Urban sediment particle size and pollutants in Southern Brazil

Background, aim and scope

Studies of particulate-associated pollutants, or PAPs, in urban areas have become necessary due to their potentially deleterious effects on the environment. However, it is not just the sediments themselves which are problematic but also their particle size composition, which has a great influence on their capacity to adsorb and transport pollutants. This paper presents the particle size distributions and concentrations of five metals (Cr, Cu, Ni, Pb and Zn) of urban sediments collected from paved streets and gully pots from 20 cities in southern Brazil. The cities have different characteristics and hence sources of PAPs associated with differing geologies, soil types and type of urbanisation. Studies of this nature enable elucidation of the relationship between diffuse sources such as streets and gully pots and the likelihood of PAPs to subsequently pollute the urban aquatic environment.

Materials and methods

Sediment samples were taken at random from paved streets and gully pots in 20 cities in Rio Grande do Sul state, southern Brazil by means of a portable vacuum cleaner to avoid loss of finer particles. The particle sizes of the samples were measured using a Cilas® 1180 laser particle analyzer, and the concentrations of five metals (Cr, Cu, Ni, Pb and Zn) were determined by wet acid digestion (HCl–HF–HClO₄–HNO₃) followed by inductively coupled plasma atomic emission spectroscopy on the <63-µm fraction.

Results

It was found that in comparison to sediments collected from the streets, gully pot sediments were more heterogeneous in terms of particle size and also that sediment samples from the gully pots were predominantly coarser than those originating on the streets. From the gully pot results, analysis of the modal particle diameter enabled the cities to be divided into three categories. The concentrations of metals in the street sediments were similar across all 20 cities, with all concentrations above background values.

Discussion

The fact that concentrations of metals in the street sediments were above statutory guideline values and that the coarser material was deposited in the gully pots suggests that the finer, more polluted sediment is not retained in the gully pots but is transported to the nearest local receiving watercourse. This finding has implications for management strategies for reducing pollution in urban environments.

Conclusions

High concentrations of Cr, Cu, Ni, Pb and Zn in the <63-µm fraction of street sediments, in combination with coarse material retained in the gully pots, indicate that metals could be transferred quite rapidly from the diffuse source of pollutants, on impermeable street surfaces, to receiving watercourses.

Recommendations and perspectives

Studies of urban sediment particle size and geochemistry enable predictions to be made of sediment behaviour in urban environments. This will inform management strategies such as the possibility of including sustainable urban drainage systems in future management plans, in which it is useful to know how efficient the drainage system is from the point of view of sediment deposition in the urban aquatic environment and the potential for pollution of receiving waters.     

Attack and defense movements involved in the interaction of <Emphasis Type="Italic">Spodoptera frugiperda</Emphasis> and <Emphasis Type="Italic">Helicoverpa zea</Emphasis> (Lepidoptera: Noctuidae)

The fall armyworm, Spodoptera frugiperda (J. E. Smith) and the corn earworm, Helicoverpa zea (Boddie) are among the main pests of maize. Both species exhibit cannibalistic behavior and quite often share the same feeding guild in maize (maize ears), which can result in several interspecific and intraspecific interactions. Paired interaction scenarios of intraspecific and interspecific larvae were assessed in arenas in the presence and absence of food to characterize movements resulting from interactions of these insects. There was a difference in the frequency of behavioral movements in all the interactions, except for S. frugiperda in the presence of food. Head touching and recoiling were the predominant movements in most of the interaction scenarios. Spodoptera frugiperda exhibited a predominance of defensive movements when competing against H. zea in the same instars. Cannibalism and predation occurred frequently in interactions involving 6th instar of H. zea against opponents in 4th instar. Larvae of H. zea show a higher aggressive movement than S. frugiperda. The larvae of S. frugiperda take advantage during the interactions, although they present more defensive movements compared to H. zea. This study provides relevant information regarding the interaction of these species and intraguild interaction, which might influence the population dynamics and the competitive displacement of pest species that share the same ecological niche.     

No Evidence of Hendra Virus Infection in the Australian Flying‐fox Ectoparasite Genus Cyclopodia

Hendra virus (HeV) causes potentially fatal respiratory and/or neurological disease in both horses and humans. Although Australian flying‐foxes of the genus Pteropus have been identified as reservoir hosts, the precise mechanism of HeV transmission has yet to be elucidated. To date, there has been limited investigation into the role of haematophagous insects as vectors of HeV. This mode of transmission is particularly relevant because Australian flying‐foxes host the bat‐specific blood‐feeding ectoparasites of the genus Cyclopodia (Diptera: Nycteribiidae), also known as bat flies. Using molecular detection methods, we screened for HeV RNA in 183 bat flies collected from flying‐foxes inhabiting a roost in Boonah, Queensland, Australia. It was subsequently demonstrated that during the study period, Pteropus alecto in this roost had a HeV RNA prevalence between 2 and 15% (95% CI [1, 6] to [8, 26], respectively). We found no evidence of HeV in any bat flies tested, including 10 bat flies collected from P. alecto in which we detected HeV RNA. Our negative findings are consistent with previous findings and provide additional evidence that bat flies do not play a primary role in HeV transmission.     

Light and scanning electron microscopy of Myxobolus porofilus sp. n. (Myxosporea: Myxobolidae) infecting the visceral cavity of Prochilodus lineatus (Pisces: Characiformes: Prochilodontidae) cultivated in Brazil

Myxobolus porofilus sp. n. is described infecting the visceral cavity of Prochilodus lineatus (Valenciennes, 1836) cultivated in S?o Paulo State, Brazil. The plasmodial form of the parasite is 3-5 mm in length and appeared compressed between the wall of the visceral cavity and the pyloric caecum, reposing on this organ. The spores are small (length 5.7 +/- 0.3 microm, width 4.8 +/- 0.2 microm; mean +/- SD) and round to elliptical in frontal view. The valve surfaces are smooth and have sutural folds. The polar capsules are ovoid, small (length 1.6 +/- 0.1 microm, width 1.1 +/- 0.1 microm) and equal in size. The polar filaments have three turns aligned perpendicularly to the longitudinal axis of the capsule. A conspicuous polar filament pore is arranged at the anterior end of the spore. The only reaction observed upon histological analysis was the presence of a capsule of connective tissue surrounding the plasmodia. This is the first report of a myxosporean parasite in the Prochilodontidae.