Immunodepletion of α‐plurivorin effector leads to loss of virulence of Phytophthora plurivora towards Fagus sylvatica

Phytophthora species secrete several proteins during their interaction with plants. Some of these proteins manipulate host metabolism favouring infection, while others can be recognized by plants thus triggering defence. Elicitins are known to elicit plant defences, leading to resistance. Here, we characterized the elicitin α‐plurivorin and proved that it was essential for the virulence of Phytophthora plurivora towards Fagus sylvatica. The immunodepletion of this peptide impaired its penetration into host tissue and in parallel P. plurivora lost its ability to colonize beech roots. Furthermore, the lack of α‐plurivorin inside the host led to an up‐regulation of several defence‐related genes of both salicylic acid and jasmonate/ethylene pathways, suggesting that α‐plurivorin might act as an effector‐triggered susceptibility during infection. Consequently, plants survived infection with P. plurivora after α‐plurivorin immunodepletion, whereas the majority of the infected control plants had died at the end of the experiment. Because canonical elicitins are ubiquitously secreted by many Phytophthora species, it is possible that these molecules may play a similar role in other susceptible interactions, being a potential target for controlling Phytophthora diseases.     

A robust set of black walnut microsatellites for parentage and clonal identification

We describe the development of a robust and powerful suite of 12 microsatellite marker loci for use in genetic investigations of black walnut and related species. These 12 loci were chosen from a set of 17 candidate loci used to genotype 222 trees sampled from a 38-year-old black walnut progeny test. The 222 genotypes represent a sampling from the broad geographic distribution of the species. Analysis of the samples using the 12 loci revealed an average expected heterozygosity of 0.83, a combined probability of identity of 3×10⁻¹⁹, and a combined probability of exclusion for paternity analysis of >0.999. The 222 genotyped trees from the progeny test comprised 39 open-pollinated families, 29 of which (having at least five sampled progeny) were used to estimate the outcrossing rate for the progeny trial. The same 29 families were used to construct a Neighbor-Joining dendrogram based upon allele sharing between individuals. The multilocus estimate of the outcrossing rate was 100% (standard error of zero), higher than the 90% level found in previous studies at the embryo stage, suggesting that both artificial and natural selection against selfs may have occurred over the 38-year lifespan of the progeny trial. In the Neighbor-Joining dendrogram, the majority of the putative siblings grouped together in 21 out of the 29 families, showing that the microsatellites were able to discern most of the family structure in the dataset. Our results indicate that errors were sometimes committed during the establishment of the progeny test. This set of microsatellite loci clearly provides a powerful tool for future applications in black walnut.     

Chemical characterization of wood and extractives of fast-growing Schizolobium parahyba and Pinus taeda

This study aims to evaluate the chemical composition of wood and extractives of Pinus taeda and Schizolobium parahyba (guapuruvu) as potential feedstock for new applications in the biorefinery industry. For this purpose, their content of α-cellulose, hemicellulose, insoluble lignin, hot water solubility, NaOH_1% solubility, inorganic materials (ash), and monomeric sugars by high-performance liquid chromatography was quantified. Attenuated total reflectance infrared spectroscopy and thermogravimetric analysis were also used to complete the physicochemical characterization of the studied woods. The extractives were obtained by soxhlet extraction with ethanol:toluene and dichloromethane and identified with pyrolysis-gas chromatography/mass spectroscopy technique. The results showed that guapuruvu wood has the higher amount of hemicellulose (16%) when compared to pine wood (10%), which resulted in higher solubility in alkali solution. Furthermore, in relation to other biomasses, the two woods presented more percentage of lignin and minor content of hemicelluloses. The P. taeda wood presented the highest percentage of extractives mainly composed of fatty acids and aromatic hydrocarbons, while guapuruvu wood had a higher percentage of phenolic compounds and also fatty acids. Both the materials have low content of extractives with dichloromethane and were mainly composed of lipophilic compounds.     

Automated measurement of canopy stomatal conductance based on infrared temperature

Decreased water uptake closes stomates, which reduces transpiration and increases leaf temperature. The leaf or canopy temperature has long been used to make an empirical estimate of plant water stress. However, with a few supplemental measurements and application of biophysical principles, infrared measurement of canopy temperature can be used to calculate canopy stomatal conductance (g_C), a physiological variable derived from the energy balance for a plant canopy. Calculation of g_C requires an accurate measurement of canopy temperature and an estimate of plant height, but all of the other measurements are available on automated weather stations. Canopy stomatal conductance provides a field-scale measurement of daily and seasonal stomatal response to prevailing soil water and atmospheric conditions, and facilitates a comparison of models that scale conductance from single leaves (measured with porometers) to canopies. A sensitivity analysis of the input measurements/estimates showed g_C is highly sensitive to small changes in canopy and air temperature, and less sensitive to the other required measurements (relative humidity, net radiation, wind speed, and plant canopy height). The measurement of g_C becomes increasingly sensitive to all of the component factors as the conditions become cloudier, cooler, and more humid. We determined g_C for alfalfa and turfgrass by making the necessary environmental measurements and coupling them with a two-source (plant canopy layer and soil layer) energy balance model. We then compared these g_C values to maximum single leaf values scaled-up to the canopy level (g_CP, defined as potential canopy stomatal conductance herein) for the two crops. For both crops, g_C matched g_CP within approximately 10% after irrigation. The turfgrass g_C measurements were also compared to mean single leaf values measured with a porometer. At mid-day, g_C values were typically about double the single leaf values. Because this approach for determining g_C allows continuous, non-contact measurement, it has considerable potential for coupling with measurements of soil moisture to better understand plant–soil water relations. It also has potential for use in precision drought stress and irrigation scheduling.     

Determining tomato fruit maturity with nondestructive in vivo nuclear magnetic resonance imaging

Nuclear magnetic resonance (NMR) images were taken of freshly harvested fruit (Lycopersicon esculentum cv. Castlemart). Measurements were also made of the stage of repeness, rate of carbon dioxide and ethylene production, lycopene and chlorophyll content, density of the pericarp wall, and consistency of the locular tissue. An NMR image at 256 × 256 pixel per image and 16 levels of intensity per pixel clearly showed many structural details of the fruit. Increased intensity was associated with liquefaction of the placental tissue during ripening, while grainines of the pericarp wall was associated with a decrease in wall density. In vivo NMR imaging of mature-green fruit produced images in which differences in maturity could be seen. The long required to produce an image and the cost of operation currently precludes the use of NMR imaging to sort mature-green tomato fruit.     

Large yield differences between reciprocal families of Solanum tuberosum

Summary A number of reports have indicated differences in reciprocal families of Solanum tuberosum when intergroup hybrids were studied. Questions have been raised concerning the potential magnitude, frequency, and genetic basis for such differences. In this study, exact reciprocal crosses were made using parents characterized by different maturities and having different cytoplasmic sources within Solanum tuberosum in order to substantiate previous claims of reciprocal differences and to clarify the nature of such differences.Field trials revealed reciprocal differences which were large and highly significant. Reciprocal yield differences of up to 115% were observed when parents of opposite maturities were used. In seven crosses, the higher-yielding reciprocal always had the higher-yielding parent as the maternal parent. Significant reciprocal differences for flowering and vine maturity were also observed between some families. The F₂ populations were generated for one set of reciprocals and the reciprocal differences in the F₂ generation seemed to be substantially reduced relative to the F₁ generation.It is concluded that the occurrence of large reciprocal differences seems to depend more upon having parents of opposite maturity than upon the taxonomic origin of the parent's cytoplasm. This, in conjunction with the reduced F₂ reciprocal differences, suggests that observed differences may be due to very persistent maternal effects or a type of dauermodification, rather than true cytoplasmic inheritance.Cooperative Investigation of U.S. Department of Agriculture, Science and Education Administration. Agricultural Research and the Wisconsin Agricultural Experiment Station.     

The transfer of the synaptic gene (sy-2) from 1EBN Solanum commersonii Dun. to 2EBN germplasm

Summary Crosses of a synaptic mutant (sy-2) of 2x(1EBN) S. commersonii Dun. with 2x(2EBN) S. chacoense Bitt. resulted in the production of 3x(2EBN) hybrids. Low levels of 2n egg production in these hybrids allowed subsequent crosses to be made with 4x(4EBN) cultivars, resulting in 5x(4EBN) S. commersonii-S. chacoense-Group Tuberosum hybrids. Seed set in these crosses averaged 0.22 seeds per fruit. Fifty-four unspotted seeds were produced in 1225 crosses of the 5x(4EBN) hybrids with 2x(2EBN) Group Phureja haploid extraction clones carrying dominant seed spot markers. These seeds yielded a total of 15 confirmed haploids having a diploid (2n=2x=24) or near diploid chromosome number. One haploid clone recovered displayed a synaptically abnormal phenotype similar to the original S. commersonii synaptic mutant. Preliminary test crosses of these haploids indicated that all haploids produced were 2EBN.This method for the transfer of alleles across EBN levels holds promise for the recovery of both qualitative and quantitative traits from 1EBN species. In these recovered, cross-compatible forms, clones with desired characteristics may be selected and easily incorporated into breeding programs.     

An evaluation of the net radiation sub-model in the ASCE standardized reference evapotranspiration equation: Implications for evapotranspiration prediction

Net radiation (R_n) is a key component of the surface energy balance, but it is expensive and difficult to measure accurately. For these reasons, R_n is often predicted in evapotranspiration (ET) calculations with a model requiring measurements of incoming shortwave radiation, air temperature, and vapor pressure. We compared R_n predictions from the R_n sub-model used in the American Society of Civil Engineers (ASCE) standardized reference ET equation to mean R_n measurements from five 4-component reference net radiometers. The radiometers were part of a recent comparison study of multiple net radiometer models conducted over irrigated and clipped turfgrass in northern Utah (Blonquist et al., 2009). In the R_n model, net shortwave radiation is determined by direct measurement of solar radiation and an assumed value of albedo for the surface (0.23 for fully vegetated surfaces), and net longwave radiation is calculated with a Brunt (1932, 1952) approach for predicting net surface emissivity, calculated from near surface vapor pressure. Additionally, the ratio of measured incoming shortwave radiation to predicted clear-sky shortwave radiation is used as a surrogate variable for cloud cover in the net longwave radiation calculation. Relative to the reference R_n measurements (average of five 4-component net radiometers), modeled R_n was high during the day by an average of 8.6% and high in magnitude (more negative) at night by an average of 13.4% over hourly time intervals. Daily total R_n calculated by summing the hourly model predictions was always higher than the reference measurements, by an average of 8.1%, whereas daily total R_n calculated from the model over daily time intervals was closer to the reference measurements, 2% high on average. The model R_n error during the day was partly caused by the assumption in the model that surface albedo is a constant value of 0.23. Measurements showed albedo ranged from approximately 0.21 at solar noon to 0.30 near the beginning and end of the day, with a mean value of 0.23. However, most of the model R_n error was due to the prediction of net longwave radiation, where the empirical equation in the model typically yielded values that were too low in magnitude (less negative), by approximately 20% on average, but the error was dependent on time of day. The R_n error at night was largely caused by the inability to measure the surrogate for cloud cover at night, which relies on measurement of solar radiation from a previous time period of sufficient solar zenith angle. All five of the net radiometer models tested in the comparison study matched the mean of the reference net radiometers better than the ASCE model. When modeled hourly R_n was used to calculate ET over hourly time intervals, or when hourly ET values were summed to yield daily ET, ET was typically high, by 6% on average, relative to ET calculated from measured reference R_n. When modeled R_n was calculated over daily time intervals and used to calculate ET over daily time intervals, ET was more accurate, 1% high on average, relative to ET calculated over daily time intervals from measured reference R_n. While new models for R_n are being developed, the sub-model in the ASCE standardized reference ET equation has been in use for the past two decades in thousands of ET stations. As newer models are developed we hope to use this data set to evaluate them.     

Growth,physiology, and nutrition of loblolly pine seedlings stressed by ozone and acidic precipitation: A summary of the ropis-south project

Previously published results from a multidisciplinary research program, Response of Plants to Interacting Stress (ROPIS), initiated by the Electric Power Research Insitute are summarized here. The overall objective of the ROPIS program was to develop a general mechanistic theory of plant response to air pollutants and other stresses. Direct and indirect phytotoxic impacts of O₃ combined with induced deficiencies of key nutrients as a consequence of acidic deposition are important components in many of the hypotheses used to explain reported declines in forest growth. In order to address these concerns as they relate to loblolly pine (Pinus taeda L.) growth and develop a greater level of mechanistic understanding of stress response, a study was formulated with two major objectives: (i) over a multi-yr period evaluate the role of loblolly pine genotype in governing loblolly growth response to O₃; and (ii) determine the underlying physiological and edaphic basis for loblolly growth response to O₃, acidic precipitation, and soil Mg status. An open-top chamber facility located at Oak Ridge, TN provided controlled O₃ exposure for the genotype screening study (1986–88) and controlled O₃ exposure and rainfall exclusion and addition for the O₃-rainfall acidity-soil Mg interaction study (1987–89). A variety of experimental techniques, measurements, and statistical procedures were used over a 4-yr period to quantify various aspects of plant growth, physiology, and soil-plant relationships. Results from the genotype screening study indicate that although family-specific O₃ effects were observed at the end of the first year, no statistically significant O₃ effects on diameter, height, or total biomass were evident at the end of three growing seasons; nor were any significant O₃-family interactions found. In the interaction study, rainfall acidity and soil Mg level had only minimal affects on seedling growth and physiology. Ozone exposure produced significant changes in many variables, the most important being a net retention of carbon in above-ground biomass and a subsequent reduction in carbon allocation to the root system. This change could have important longterm implications for the tree's ability to obtain water and nutrients, maintain important rhizosphere organisms, and achieve a level of vigor that protects against disease and insect attack.