Clonality and phenotyping of canine lymphomas before chemotherapy and during remission using polymerase chain reaction (PCR) on lymph node cytologic smears and peripheral blood

Polymerase chain reaction (PCR) assays for the immunoglobulin and T-cell receptor genes were utilized to determine phenotype and clonality from lymph node cytologic smears and peripheral blood lymphocytes from 10 dogs with lymphoma, before chemotherapy and during remission. Results were compared with those from 13 dogs with a cytologic diagnosis of lymph node hyperplasia. Clonality was identified in 7 of the lymphomas on the basis of either lymph node cytology or peripheral blood lymphocytes before treatment. No lymph node hyperplasia samples were clonal. In 6 of the dogs with lymphoma, clonality was demonstrated during clinical remission. Detection of PCR clonality during clinical remission is an effective means of identifying minimal residual disease in canine lymphoma and thus additional work is warranted to determine if molecular remission is prognostic or predictive for outcome in well-controlled and well-defined lymphoma subtypes.     

Temporal changes in VAM fungi in the cocoa agroforestry systems of central Cameroon

In Cameroon, cocoa trees are mostly grown in forests and without fertilization. Our aim was to learn more about the temporal dynamics of soils in cocoa agroforests by comparing young (1–4 years old) and old (over 25 years old) cocoa agroforests. Short fallow and secondary forest were used as treeless and forest references. The numbers and diversities of soil vesicular arbuscular mycorrhizal (VAM) fungi on 60 cocoa producing farms in the Central province of Cameroon were assessed based on the classical morphotyping of spore morphology. We also observed the soil organic matter, nitrogen and major soil nutrients. VAM spore density was significantly lower in the young cocoa agroforests (16 spores g⁻¹ dry soil) than in the old cocoa agroforests (36 spores g⁻¹ dry soil). Levels in the nearby secondary forest (46 spores g⁻¹ dry soil) were not significantly different from old cocoa. The spore density was significantly highest in the short fallow (98 spores g⁻¹ dry soil). The Shannon–Weaver index also showed significantly lower biodiversity in young cocoa (0.39) than in old cocoa agroforests (0.48), secondary forest (0.49) and short fallow (0.47). These observations were supported by significant differences in the C:N ratio, Ca, Mg, and cation exchange capacity between young and old cocoa agroforests. We concluded that unfertilized cocoa agroforests could be sustainable, despite a decrease in some soil characteristics at a young stage, due to traditional land-conversion practices based on selective clearing and burning of secondary forest.     

Fatty acid utilization during the early larval stages of Florida pompano (Trachinotus carolinus) and Common snook (Centropomus undecimalis)

The pattern of conservation and loss of fatty acids from the yolk sac during the endogenous feeding period and subsequent starvation was studied in pompano and snook larvae. Fundamental information on the early fatty acid dynamic and mobilization of pompano and snook larvae was collected. In both species, fatty acids were utilized as an energy source after hatching. Mono‐unsaturated fatty acids were catabolized, while saturated and poly‐unsaturated fatty acids were conserved. High levels of arachidonic acid (ARA) in pompano and snook eggs, as well as selective retention in the unfed larvae suggest a high dietary requirement for this fatty acid during the early stages of larval development. The effect of an ARA supplementation was therefore investigated in snook larvae at the rotifer feeding stage. The fatty acid profile of the larvae was successfully influenced to match that of wild eggs; however, no significant improvement in growth or survival was observed. Future research should be carried out over a longer period of time and include factors related to stress resistance.     

Isolation,partial identification and application of diazotrophic rhizobacteria from traditional Indian rice cultivars

A diversity of N₂-fixing (diazotrophic) bacteria was isolated from two traditional rice cultivars, Sataria and Kartiki, from the rice growing area of Mithila region of North Bihar, India, where low levels of nitrogen fertilizers are applied. Nitrogen-free semisolid media NFb, JMV and LGI with different carbon sources and pH-values were used for enrichment and isolation of root-associated diazotrophs. The colonization density of roots by diazotrophs, as estimated from positive pellicle formation at highest dilution in nitrogen-free enrichment media, was 10⁶–10⁸ diazotrophic bacteria per g fresh root weight. Roots of the cultivar Kartiki were found to be more densely colonized endophytically by diazotrophs as detected after chloramine T (1%) surface disinfection. To ascertain the phylogenetic affiliation of the isolates, phylogenetic oligonucleotide probes and the Fluorescent in situ Hybridization (FISH) technique were applied. Using group-specific rRNA directed oligonucleotide probes, the majority of the isolates could be identified as alpha-, beta-, or gamma-proteobacteria. Using 16S and 23S rRNA-directed genus- or species-specific probes, Herbaspirillum seropedicae, Azospirillum amazonense, Burkholderia cepacia/vietnamiensis, Rhizobia and Pseudomonas spp. were found to be the most prominent root associated culturable diazotrophs. Diazotrophic Gluconacetobacter spp. were also demonstrated as colonizers of rice roots. Burkholderia cenocepacia, Pseudomonas sp. and three diazotrophic PGPR reference strains were used for the inoculation of axenically grown rice seedlings to determine the plant growth promoting potential. Significant increases in the shoot length (up to 60%), shoot dry weight (up to 33%) and the grain yield (up to 26%) per plant were observed in non-axenic pot and field trials. Using semisolid enrichment media after surface sterilization of field grown inoculated rice roots and oligonucleotide probing of the diazotrophic enrichment cultures, a sustainable colonization with the inoculated bacteria could be demonstrated.     

Current knowledge on plant/canopy architectural traits that reduce the expression and development of epidemics

To reduce the use of pesticides, innovative studies have been developed to introduce the plant as the centre of the crop protection system. The aim of this paper is to explain how architectural traits of plants and canopies induce a more or less severe epidemic and how they may be modified in order to reduce disease development. In particular, it focuses on three key questions: i) which processes linked to epidemics can be influenced by architecture ii) how can architecture be characterized relative to these modes of action, and iii) how can these effects be explored and exploited? The roles of plant/canopy architecture on inoculum interception, on epidemic development via the microclimate and on tissue receptivity are discussed. In addition, the concepts of disease avoidance, canopy porosity and an ideotype unfavourable for disease development are described. This paper shows that many advances have already been made, but progress is still required in four main fields: microclimatology, mathematical modelling of plants, molecular genetics and ideotype conception.     

Issues and special features of animal health research

ABSTRACT: In the rapidly changing context of research on animal health, INRA launched a collective discussion on the challenges facing the field, its distinguishing features, and synergies with biomedical research. As has been declared forcibly by the heads of WHO, FAO and OIE, the challenges facing animal health, beyond diseases transmissible to humans, are critically important and involve food security, agriculture economics, and the ensemble of economic activities associated with agriculture. There are in addition issues related to public health (zoonoses, xenobiotics, antimicrobial resistance), the environment, and animal welfare.Animal health research is distinguished by particular methodologies and scientific questions that stem from the specific biological features of domestic species and from animal husbandry practices. It generally does not explore the same scientific questions as research on human biology, even when the same pathogens are being studied, and the discipline is rooted in a very specific agricultural and economic context.Generic and methodological synergies nevertheless exist with biomedical research, particularly with regard to tools and biological models. Certain domestic species furthermore present more functional similarities with humans than laboratory rodents.The singularity of animal health research in relation to biomedical research should be taken into account in the organization, evaluation, and funding of the field through a policy that clearly recognizes the specific issues at stake. At the same time, the One Health approach should facilitate closer collaboration between biomedical and animal health research at the level of research teams and programmes.