Do surrogates describe patterns in marine macroalgal diversity in the Recherche Archipelago,temperate Australia?

• 1. Surrogates aim to predict species diversity and to minimize sampling effort. Here the value of surrogates for marine macroalgae is tested.
• 2. Higher taxonomic levels and dominant taxa were evaluated as surrogates for detecting patterns in macroalgal species diversity (derived from species‐level biomass data) in the Recherche Archipelago, Western Australia.
• 3. Data were stratified by two island groups (inshore and offshore), three depth intervals (<10 m, 10–20 m, >20 m), and two exposures to wave energy. Correlations between similarity matrices from surrogate and species diversity data matrices were analysed using a modified Spearman rank correlation (r_s). The ability of surrogates to detect differences between exposures to wave energy was also investigated using analysis of similarity. Species diversity data were aggregated to higher taxonomic levels and were either fourth‐root or presence/absence (richness) transformed.
• 4. Species richness was the most consistent surrogate (r_s‐values>0.69, P=0.001). Genus‐level richness was also strongly correlated to species diversity in the Recherche Archipelago, except in depths <10 m where patterns in diversity were characterized by species turnover.
• 5. At offshore islands in depths 10–20 m and >20 m, family‐ and order‐level biomass data were suitable surrogates owing to the abundance of Alariaceae (Order Laminariales) represented by a single genus and species. Surrogates using biomass data from the orders Laminariales, Ceramiales, Dictyotales and Fucales were also successful at offshore islands in middle to deeper depths.
• 6. At inshore islands in depths 10–20 m and >20 m, genera from the orders Gigartinales, Fucales and Ceramiales were strongly correlated to species biomass data.
• 7. Surrogates, like species richness, that were strongly correlated to species biomass data were also able to distinguish between exposures to wave energy, based on analysis of similarity tests.
• 8. Sampling effort would be reduced if collecting richness data in species‐rich macroalgal assemblages such as those found in temperate Australia.

Copyright © 2006 John Wiley & Sons, Ltd.     

Doppler echocardiography-derived evidence of pulmonary arterial hypertension in dogs with degenerative mitral valve disease: 86 cases (2001-2005)

OBJECTIVE: To determine the prevalence of Doppler echocardiography-derived evidence of pulmonary arterial hypertension (DEE-PAH) in dogs with mitral valve disease (MVD) classified according to the International Small Animal Cardiac Health Council (ISACHC) heart failure classification scheme and various echocardiographic and Doppler indices of MVD severity. DESIGN: Retrospective case series. ANIMALS: 617 dogs examined from 2001 to 2005 with MVD in ISACHC classes I to III. PROCEDURES: Dogs were examined echocardiographically. Criteria used for systolic and diastolic DEE-PAH were detection of high tricuspid (> or = 2.5 m/s) and telediastolic pulmonic (> or = 2.0 m/s) valvular peak regurgitant jet velocities, respectively, by use of continuous-wave Doppler echocardiography. RESULTS: 86 (13.9%) dogs with MVD had a diagnosis of DEE-PAH. Severity and prevalence of DEE-PAH increased with ISACHC class (3.0%, 16.9%, 26.7%, and 72.2% prevalences for ISACHC classes Ia, Ib, II, and III, respectively). A significant correlation between systolic or diastolic pulmonary arterial pressure and left atrial-to-aortic diameter ratio (LA/Ao) was detected. Doppler echocardiography-derived evidence of pulmonary arterial hypertension was detected in 18 dogs with values of LA/Ao within reference range, all of which had moderate (n = 2 dogs) or severe (16) mitral valve regurgitation on color Doppler imaging. CONCLUSIONS AND CLINICAL RELEVANCE: The prevalence and degree of DEE-PAH were related to the severity of MVD. Changes associated with DEEPAH may be detected in early stages of the disease, but only in dogs with severe mitral valve regurgitation.     

Phylogeny, diversity, and species delimitation in some species of the Xiphinema americanum-group complex (Nematoda: Longidoridae), as inferred from nuclear and mitochondrial DNA sequences and morphology

During nematode surveys in southern Spain and Italy 14 populations of Xiphinema species tentatively identified as Xiphinema americanum-group were detected. Morphological and morphometrical studies identified three new species and six known Xiphinema americanum-group species, viz.: Xiphinema parabrevicolle n. sp., Xiphinema parapachydermum n. sp., Xiphinema paratenuicutis n. sp., Xiphinema duriense, Xiphinema incertum, Xiphinema opisthohysterum, Xiphinema pachtaicum, Xiphinema rivesi, and Xiphinema santos. The Xiphinema americanum-group is the most difficult Xiphinema species group for diagnosis since the morphology is very conservative and morphometric characters often overlap. This group includes vectors of several important plant pathogenic viruses that cause significant damage to a wide range of agricultural crops. Molecular characterisation of these species using D2-D3 expansion regions of 28S rRNA, 18S rRNA, ITS1-rRNA and the protein-coding mitochondrial gene, cytochrome oxidase c subunit 1 was carried out and maximum likelihood and Bayesian inference analysis were used to reconstruct phylogenetic relationships among these species and with other Xiphinema americanum-group species.     

Estimating genetic effects in maternal and paternal half-sibs from tetraploid-diploid crosses in <Emphasis Type="Italic">Musa</Emphasis> spp.

Ploidy manipulations and interspecific crosses have allowed considerable genetic progress in Musa breeding, but estimation of genetic parameters for parental selection remains a major challenge. This study aimed to determine the components of genetic variance and the relative contribution of genetic effects to phenotypic variation of yield and phenological traits in secondary triploid hybrids from tetraploid–diploid crosses. The hybrids were evaluated in two consecutive growth cycles on a tropical forest site. Non-genetic effects accounted for a large fraction of the variation observed for most traits, except bunch weight. Partitioning of genetic variance into additive and dominance components confirmed the predominant role of additive genetic effects on the expression of bunch weight, fruit filling time, fruit length, plant height, and number of leaves while primarily non-additive effects accounted for suckering behavior and fruit circumference. Maternal general combining ability (GCA) effects accounted for the additive genetic variation in plant height and number of leaves, suggesting that selection for these traits should be carried out in tetraploid clones. Conversely, paternal GCA effects were the primary causes of genetic variation for fruit filling time, bunch weight, and fruit length, suggesting that these characters should be selected for in diploid clones. Specific combining ability (SCA) effects were observed for all traits, except fruit filling time, suggesting that additional genetic gain could be achieved through recombinative heterosis for these traits.     

Study of the genetic variability of porcine circovirus type 2 detected in Serbia and Slovenia

Recent variants of porcine circovirus type 2 (PCV2) were obtained from tissues of domestic pigs with porcine circovirus associated disease and from randomly selected wild boar samples from Serbia and Slovenia. A 450-base-pair nucleotide sequence was obtained by PCR from the ORF2. The derived nucleotide and amino acid sequences were aligned and compared to the corresponding region of closely related PCV2 sequences determined in previous years and retrieved from the GenBank. The 30 Serbian and 17 Slovenian PCV2 sequences clustered into three previously determined genotypes (PCV2a: 7), (PCV2b: 38) and (PCV2d: 2). Three major variable regions, concerning 29 amino acid position substitutions within the ORF2, were observed, which further supports the segregation of the detected strains into three separate genotypes. This study indicates that PCV2b is the predominant genotype in Serbia and Slovenia and the detected PCV2 strains are closely related to those previously described in Europe and in other parts of the world.