Relationships among Pasteurellaceae isolated from free ranging chickens and their animal contacts as determined by quantitative phenotyping, ribotyping and REA-typing

One hundred and forty-three Pasteurella spp. strains and 10 unclassified strains obtained from free ranging poultry, dogs and cats were investigated by extended phenotypic characterization. One hundred and forty-nine of these strains were selected for further studies using ribotyping and REA-typing to evaluate the role of dogs and cats in Pasteurella multocida transmission. Seven and six type strains were included for comparison in phenotyping and genotyping, respectively. Eleven clusters and six unclustered strains were revealed by phenotyping. Ribotyping outlined 12 clusters and six unclustered strains. A correlation between clusters obtained by phenotyping and ribotyping was demonstrated which indicated that a genetic basis exists for clusters outlined by quantitative evaluation of phenotypic data. Similarities and differences in hosts, phenotype, ribotype, and zone of isolation were demonstrated among Pasteurella strains investigated. Isolates of P. multocida from ducks were shown to be clonal by both phenotyping and ribotyping. These strains were identical to one of the chickens strains. REA-typing, however, showed that the chicken strain was different underlining that exchange of clones of P. multocida between avian species rarely happens under village conditions. Management practise in the villages suggest the potential for exchange of P. multocida between poultry and animals kept in contact. The present findings, however, did not indicate that clones of P. multocida are widely exchanged between poultry and other animal species, even though close contact exists. In the present investigation exchange of clones of P. multocida was only demonstrated among animals belonging to the same species. Caution is drawn to the use of ribotyping as the sole method for epidemiological typing and tracing of P. multocida. The present results also underline the importance of proper phenotyping in the identification of P. multocida and related species.     

Anaplasma phagocytophilum in Danish sheep: confirmation by DNA sequencing

Background

The presence of Anaplasma phagocytophilum, an Ixodes ricinus transmitted bacterium, was investigated in two flocks of Danish grazing lambs. Direct PCR detection was performed on DNA extracted from blood and serum with subsequent confirmation by DNA sequencing.

Methods

31 samples obtained from clinically normal lambs in 2000 from Fussingø, Jutland and 12 samples from ten lambs and two ewes from a clinical outbreak at Feddet, Zealand in 2006 were included in the study. Some of the animals from Feddet had shown clinical signs of polyarthritis and general unthriftiness prior to sampling. DNA extraction was optimized from blood and serum and detection achieved by a 16S rRNA targeted PCR with verification of the product by DNA sequencing.

Results

Five DNA extracts were found positive by PCR, including two samples from 2000 and three from 2006. For both series of samples the product was verified as A. phagocytophilum by DNA sequencing.

Conclusions

A. phagocytophilum was detected by molecular methods for the first time in Danish grazing lambs during the two seasons investigated (2000 and 2006).     

Residues of DDT in brains and bodies of birds that died on dosage and in survivors

Residues of 1,1,1-trichloro-2,2-bis(p-chlorophenyl)-ethane (DDT) and 1,1-dichloro-2,2-bis(p-chlorophenyl)-ethane (DDD) in brains of cowbirds (Molothrus ater) killed by dietary dosage of DDT were similar in birds that died after various lengths of time on dosage and in birds that died of delayed effects after as much as 40 days on clean food. Residues of DDT and DDD, but not of 1,1-dichloro-2,2-bis-(p-chlorophenyl)-ethylene (DDE), were much lower in survivors 112 days after dosage. The relative importance of DDT and DDD in brains could not be determined, but DDE appeared not to be critical. Residues in brains of cowbirds were similar to those reported for robins, sparrows, eagles, and white rats. Residues in livers and carcass remainders (with the possible exception of DDD in the liver) appeared unsuitable for diagnosing the cause of death.     

Energy generation for an ad hoc wireless sensor network-based monitoring system using animal head movement

The supply of energy to electronics is an imperative constraining factor to be considered during the design process of mobile ad hoc wireless sensor networks (MANETs). This influence is especially important when the MANET is deployed unattended or the wireless modules within the MANET are not easily accessible. Therefore, exploring novel sources of energy generation rather than operating electronics only on limited power supplies such as batteries is a major challenge. Monitoring free-ranging animal behavior is an application in which the entities (animals) within the MANET are not readily accessible; however, animal movement can be potentially used to generate energy. In this study, the head movements of individual sheep in a flock during grazing were monitored in order to investigate the amount of energy that can be generated by these movements. By applying the Lagrange-d’Alembert Principle to this problem, the equations of motion from each neck-mounted sensor as well as the amount of mechanical energy generated per time instant (each second) during upward and downward head movements were calculated. This resulted in the production of 857 mW and 1660 mW during the downward and upward movements, respectively. Furthermore, the energy consumption of each wireless node within the MANET was estimated to be 117.8 mW per second. Conversion of energy from mechanical to electrical requires miniature electromechanical generators that can currently provide between 25% and 50% conversion efficiency. Even using the worst conversion efficiency (25%), a minimum of 214 ± 25 mW of electrical energy per second could be generated. This amount exceeds the energy consumed by the wireless sensors that can be used to gather parameters describing animal behavior such as neck and head movement. This study suggests that the amount of energy generated by the vertical neck-head movement of sheep during grazing can be converted to useful electrical power adequate to provide power for operation of wireless sensor nodes on a continuous basis within a MANET-based animal behavior monitoring system.     

Changes in potato starch quality during growth

Summary Potato starch quality parameters (amylose concentration, glucose-6-phosphate content and granule size) were analyzed in relation to the harvesting date and tuber size of four cultivars. A significant increase in the glucose-6-phosphate content and granule size of starch was observed during tuber growth, whereas the amylose concentration was constant. Granule size increased markedly, whereas glucose-6-phosphate content showed slightly increasing values with increasing tuber size. Amylose concentration showed no correlation with tuber size. We conclude that the changes in the granule size, glucose-6-phosphate and amylose content of potato starch during growth are independent of each other.     

Cadmium soil sorption at low concentrations: V. Evidence of competition by other heavy metals

Sorption of Cd at low concentrations onto 12 Danish soils (coarse sands to sandy loams) was studied with respect to competitive effects of other heavy metals by means of laboratory batch experiments. Both a mixture of Ni, Co, and Zn and of Cr, Cu, and Pb effectively reduced the sorption of Cd onto the soils. The employed mixtures of competing heavy metals were considered to resemble moderately polluted conditions. Cadmium distribution coefficients were reduced 2 to 14 times due to competition, but at constant concentrations of competing heavy metals the shape of Cd isotherms was not affected. The effect of Ni, Co, and Zn, which like Cd is primarily governed in soil environments by sorption, was also studied individually. Apparently Zn, which is present in relatively higher concentrations than Ni and Co, accounts for most of the observed competition with Cd.     

A delay-differential model for representing small pelagic fish stock dynamics and its application for assessing alternative management strategies under environmental uncertainty

We present a novel adaptation of the classic discrete delay-difference model, a continuous delay-differential model (cDDM), which can adequately represent population dynamics of stocks that turn over rapidly and continuously over time (e.g., small pelagic fish, small tunas, and shrimps). We used the Northern-Central Peruvian anchoveta stock (Engraulis ringens, Engraulidae) as a case study for implementing the cDDM and conducted a management strategy evaluation (MSE) through stochastic optimization in policy space (SOPS). Our results showed that cDDM integrated with SOPS efficiently searches optimum and near-optimum harvest control rules (HCR) and is an alternative to pre-setting arbitrary HCRs as in traditional MSE. The cDDM showed comparable stock biomass and recruitment estimate reconstructions to more complex stock assessment models described for anchoveta. We concluded that the anchoveta stock is sustainably managed and is an example of adaptive fisheries management under high ocean-climate variability and uncertainty. Contrary to fishery textbooks, the anchoveta's collapse was not entirely due to the 1972 El Niño (EN) but a recruitment failure preceding EN. Our reconstructions revealed that low recruitment (or recruitment failure) could still occur at high stock biomass. Anchoveta's stock biomass is larger than pre-collapse, likely due to favourable environmental conditions (a cooling trend) and management, despite more frequent and stronger EN events. SOPS quickly revealed that harvest strategies with large base biomass (>5 mmt) lead to higher interannual stock variability and would not produce substantial increases in long-term yield. Alternative HCRs with lower base biomass, while adjusting for productivity regimes, have similar long-term yields without affecting the long-term average stock.