UV-visible spectroscopic investigation of the 8,8-methylmethine catechin-malvidin 3-glucoside pigments in aqueous solution: structural transformations and molecular complexation with chlorogenic acid

The physicochemical properties of 8,8-methylmethine catechin-malvidin 3-O-glucoside isomers, commonly referred to as catechin-ethyl-malvidin 3-O-glucoside, have been studied in aqueous solutions and compared with those of the parent anthocyanin (malvidin 3-O-glucoside). The hydration and acidity constants (pKh and pKa) of the catechin-ethyl-malvidin 3-O-glucoside pigments and malvidin 3-O-glucoside were determined by UV-visible spectroscopic measurements. The ethyl-linked catechin-malvidin 3-O-glucoside pigments present higher stability toward hydration than the parent anthocyanin. The high resistance of these ethyl-linked pigments toward the hydration is related to the self-association that offers optimal protection from the nucleophilic attack of water. Moreover, the ethyl link may confer to the molecule enough flexibility to undergo intramolecular interaction, further protecting it from hydration and bisulfite discoloration. In the wine pH range (3.2-4.0), due to the low pKa and high pKh values, the ethyl-linked pigments are present as colored forms (flavylium cation and quinonoid bases).     

Vermicomposting leachate as liquid fertilizer for the cultivation of sugarcane (Saccharum sp.)

In vermicomposting, the main product is the worm casts, but a leachate is generated that contains large amounts of plant nutrients. This leachate is normally diluted to avoid plant damage. We investigated how dilution of vermicompost leachate combined with different concentrations of nitrogen (N) - phosphorus (P) - potassium (K) triple 17 fertilizer, and polyoxyethylene tridecyl alcohol as dispersant and polyethylene nonylphenol as adherent to increase efficiency of fertilizer uptake, affected sugarcane plant development. The vermicomposting leachate with pH 7.8 and electrolytic conductivity 2.6 dS m^?1, contained 834 mg potassium (K) l^?1, 247 mg nitrate (NO₃^?) l^?1 and 168 mg phosphate (PO₄^3?) l^?1, was free of pathogens and resulted in a 65% germination index. Vermicompost leachate did not inhibit sugarcane growth and mixed with 170 g l^?1 NPK triple 17 fertilizer resulted in the best plant development. No dispersant or adherent was required to improve plant height and stem development.     

Free galactose concentrations in fresh and stored apples (Malus domestica) and processed apple products

Gas chromatography was used to quantitate free galactose in Braeburn, Fuji, Red Delicious, and Spartan apples during cold storage, after thermal processing of apple slices and in juice produced using clarification and/or liquifaction enzymes. Spartan had significantly higher galactose levels as compared to Red Delicious apples, but changes in galactose in all varieties during 9 months of cold storage were insignificant. Blanching and canning decreased galactose levels, but doubling the thermal processing during canning increased the free galactose concentration detected in plant tissue. An enzymatic liquefaction aid used to prepare apple juice dramatically increased the free galactose content while a clarification aid caused only a slight increase due to its selective action on soluble pectin. These findings provide useful information for dietitians to base diet recommendations for galactosemic patients.     

Chemical characterization of lignin and lipid fractions in kenaf bast fibers used for manufacturing high-quality papers

The chemical composition of lignin and lipids of bast fibers from kenaf (Hibiscus cannabinus) used for high-quality paper pulp production was studied. Pyrolysis-gas chromatography/mass spectrometry (Py-GC/MS) of fibers showed a lignin with a high syringyl/guaiacyl ratio (5.4) and minor amounts of p-hydroxyphenyl units. Simultaneously, sinapyl and coniferyl acetates were also identified, indicating that this lignin is partially acetylated. p-Hydroxycinnamic acids were found in only trace amounts. The main lipids identified by GC/MS of extracts from kenaf fibers were series of long-chain n-fatty acids, waxes, n-alkanes, and n-fatty alcohols. Free and esterified sterols and triterpenols, steroid hydrocarbons, and steroid and triterpenoid ketones, as well as steryl glycosides, were also found. Finally, the fate of the main constituents of kenaf fibers in alkaline pulping was also investigated.     

Integrating GIS and homing experiments to study avian movement costs

Forest cover reduction may affect movements of forest animals, but resistance to animal movements in and out of forests remains unknown despite its importance for modelling. We tested whether ovenbird (Seiurus aurocapilla), a forest-interior songbird, responds similarly to the amount of forest cover while moving locally (~2 km) and over entire landscapes (~25 km). We compared spatially-explicit simulations to field data to address the issue of resistance to movement in open areas. We caught, banded and translocated 143 territorial males 0.8–27 km away from their territory early in the breeding season. Seventy-eight percent and 50% of translocated males returned (homed) within 10 days following “local” and “landscape” translocations respectively. Independent of translocation distance, homing times increased with decreasing forest in the landscape. With a Geographic Information System (GIS), we simulated “least-cost” paths that homing ovenbirds would ideally take, when resistance to movement in open areas ranged 1–1000 times the resistance to movement in forest. The length, the cumulative cost, and variability of simulated least-cost movement paths increased with increasing resistance in open areas. With landscape translocations, least-cost path length explained homing time better than Euclidean distance, and based on an information-theoretic approach, resistance to movement was estimated to be 27 times greater in open areas than in forests (95% confidence interval: 16–45). However, least-cost path length did not perform better than Euclidean distance with local translocations, and the cumulative cost of least-cost paths was not associated to homing time in either translocation scale. We conclude that resistance to animal movements in open areas can be addressed by a combination of GIS modelling and translocation experiments, and is between one and two orders of magnitude greater than resistance to movements in forests, in the case of ovenbirds.     

Ecophysiology and growth of advance red spruce and balsam fir regeneration after partial cutting in yellow birch-conifer stands

We investigated ecophysiological and growth responses of short (0.4 to 1.3 m in height) advance regeneration of red spruce (Picea rubens Sarg.) and balsam fir (Abies balsamea L.) six years after removal of 0, 40, 50, 60 and 100% of the overstory basal area (BA) in two yellow birch-conifer stands. Partial cuts significantly increased stomatal conductance of red spruce only. Light-saturated photosynthesis (leaf-area basis) of both species increased with BA removal, but unlike red spruce, specific leaf area (SLA) of balsam fir decreased with increased cutting intensity. Partial cuts appreciably increased the concentration of N and Ca in red spruce and balsam fir foliage, respectively, and resulted in decreased foliar concentrations of K in red spruce and Mg in balsam fir. The height and lateral growth of both species increased with BA removal, although partial cuts were more beneficial to balsam fir. The data suggest that short advance regeneration of red spruce and balsam fir can coexist under partial overstory conditions, but balsam fir has physiological characteristics and a capacity for morphological adjustment (SLA) that places it at an advantage when in competition with red spruce.     

Large-scale structural variation and long-term growth dynamics of Juniperus thurifera trees in a managed woodland in Soria, central Spain

? Juniper woodlands have a great conservational and productive importance in Spain. However, basic traits of their structural variation and growth dynamics are unknown.

? To characterize the structural variation and assess both height and radial growth patterns, we sampled and measured stem cross-sections every 0.5 m in height from 107 Spanish juniper (Juniperus thurifera L.) trees, which were selected based on a 350 m regular grid over a whole woodland of 3 300 ha in area. We used dendroecological techniques and spatial analysis to study tree structure and growth.

? Structural traits such as bole diameter and height were mainly determined by tree life-related parameters such as tree age and growth rate variation, while abiotic factors such as altitude played a minor role in determining structural variation. Over the last 300 years, juniper establishment has been continuous in time but discontinuous in space. Large-scale spatial heterogeneity of tree establishment, and the presence of an early growth suppression and abrupt growth changes in junipers > 100 years old are consequences of an intense management that almost ceased in the late 19th century.

? Abrupt growth releases and suppressions were synchronic among different age classes, and coincided with documentary records on livestock decrease and key historical changes in land use. Growth patterns suggest that juniper is a brow sing-tolerant species that is able to survive large periods of intense browsing pressure.

     

Bioinformatics tools for the discovery of new lipopeptides with biocontrol applications

As conventional or chemical pesticides have negative impact on environment and health of both farmer and consumers, it becomes relevant to develop alternative solutions to limit their use. In this context, innovative strategies to accelerate the development of biocontrol agents are welcome. For a decade of years, it has been demonstrated that lipopeptides are very efficient weapons against fungi responsible for crop diseases. Lipopeptides are secondary metabolites, produced by many microorganisms including beneficial rhizobacteria. The lipopeptide biosynthetic pathways include nonribosomal peptide synthetases. These modular enzymatic complexes work as assembly lines to build the peptides step by step, leading to the production of original peptide compounds with specific features as the presence of non proteinogenic monomers and cyclic and branched structures. In this paper, Florine and Norine bioinformatics tools, especially dedicated to non-ribosomal synthetases and their products are presented. Their use is mainly focused on the discovery of lipopeptides produced by Bacillus or Pseudomonas because they seem to represent a versatile reservoir of active secondary metabolites with promising activities for applications in phytosanitary area.