Identification of a DNA nonhomologous end-joining complex in bacteria

In eukaryotic cells, double-strand breaks (DSBs) in DNA are generally repaired by the pathway of homologous recombination or by DNA nonhomologous end joining (NHEJ). Both pathways have been highly conserved throughout eukaryotic evolution, but no equivalent NHEJ system has been identified in prokaryotes. The NHEJ pathway requires a DNA end-binding component called Ku. We have identified bacterial Ku homologs and show that these proteins retain the biochemical characteristics of the eukaryotic Ku heterodimer. Furthermore, we show that bacterial Ku specifically recruits DNA ligase to DNA ends and stimulates DNA ligation. Loss of these proteins leads to hypersensitivity to ionizing radiation in Bacillus subtilis. These data provide evidence that many bacteria possess a DNA DSB repair apparatus that shares many features with the NHEJ system of eukarya and suggest that this DNA repair pathway arose before the prokaryotic and eukaryotic lineages diverged.     

Dimensionality control of electronic phase transitions in nickel-oxide superlattices

The competition between collective quantum phases in materials with strongly correlated electrons depends sensitively on the dimensionality of the electron system, which is difficult to control by standard solid-state chemistry. We have fabricated superlattices of the paramagnetic metal lanthanum nickelate (LaNiO(3)) and the wide-gap insulator lanthanum aluminate (LaAlO(3)) with atomically precise layer sequences. We used optical ellipsometry and low-energy muon spin rotation to show that superlattices with LaNiO(3) as thin as two unit cells undergo a sequence of collective metal-insulator and antiferromagnetic transitions as a function of decreasing temperature, whereas samples with thicker LaNiO(3) layers remain metallic and paramagnetic at all temperatures. Metal-oxide superlattices thus allow control of the dimensionality and collective phase behavior of correlated-electron systems.     

Advanced solid phase extraction using molecularly imprinted polymers for the determination of quercetin in red wine

Solid phase extraction (SPE) based on molecularly imprinted polymers (MIPs) is a novel approach for sample preparation and preconcentration, gaining increased interest in the fields of environmental, clinical, and food analysis. The first application combining MIPs with SPE for advanced beverage analysis is reported. MIPs for the flavonoid quercetin have been generated, using quercetin as a template molecule in a self-assembly approach and yielding imprinting of 1% of the used template. The MIP achieved a capacity of 0.4 g quercetin per gram polymer and a recovery rate of 98.2%. The application of these synthetic receptors as SPE material for the selective extraction and preconcentration of quercetin from synthetic and red wine samples was investigated. Red wine samples from a French Merlot were directly applied onto the SPE cartridge. The collected fractions were analyzed by high-pressure liquid chromatography. For verification of the obtained results, a similarly prepared nonimprinted polymer and a classical octadecyl silane reversed-phase cartridge were applied as the SPE matrix during control experiments. The MIP enabled the selective extraction of quercetin from a complex matrix, such as red wine, spiked with 8.8 mg per liter quercetin, demonstrating the potential of molecularly imprinted solid phase extraction for rapid, selective, and cost-effective sample pretreatment.     

Trace Element Concentrations in the Tissues of Proteus Anguinus (Amphibia,Caudata) and the Surrounding Environment

Water, Air, &; Soil Pollution - The concentrations of some essential (Cu, Zn, Se) and some toxicelements (Hg, As) were determined in tissues (liver, kidneys, integument, and muscle) of the...     

Sulphur speciation and turnover in soils: evidence from sulphur K-edge XANES spectroscopy and isotope dilution studies

Sulphur K-edge X-ray absorption near edge structure (XANES) spectroscopy was used to quantify S species in humic substance extracts from ten soils from the UK, China and New Zealand, which differ in land use and agricultural management. XANES spectroscopy showed the presence of most reduced (sulphides, disulphides, thiols and thiophenes), intermediate (sulphoxides and sulphonates) and highly oxidised S (ester sulphates) forms, with the three groups representing 14-32%, 33-50% and 22-53% of the organic S in the humic substance extracts, respectively. Land use had a profound influence on the relative proportions of S species. Well-drained arable soils generally had a higher proportion of organic S present in the most oxidised form than the grassland soils collected nearby, whereas paddy soils showed a more reduced profile due to episodic flooding. In the Broadbalk Classical Experiment at Rothamsted, reversion of an arable system to grassland or woodland in the 1880s resulted in an increase of the most reduced and intermediate S species at the expense of the most oxidised S species. Long-term applications of farmyard manure to an arable plot also shifted S species from the most oxidised to the intermediate and the most reduced species. Sulphur immobilisation and gross mineralisation were determined in seven soils using the ³⁵S isotope dilution method. Gross mineralisation during a 53-day incubation correlated more closely with the amounts of the most reduced and intermediate S species than with the most oxidised S species, suggesting that the former (C-bonded S) were the main source of organic S for mineralisation in the short-term.     

Subsoil retention of organic and inorganic nitrogen in a Brazilian savanna Oxisol

Abstract. Nitrogen (N) loss by leaching poses great challenges for N availability to crops as well as nitrate pollution of groundwater. Few studies address this issue with respect to the role of the subsoil in the deep and highly weathered savanna soils of the tropics, which exhibit different adsorption and drainage patterns to soils in temperate environments. In an Anionic Acrustox of the Brazilian savanna, the Cerrado, dynamics and budgets of applied N were studied in organic and inorganic soil pools of two maize (Zea mays L.) – soybean (Glycine max (L.) Merr.) rotations using ¹⁵N tracing. Labelled ammonium sulphate was applied at 10 kg N ha^?1 (with 10 atom%¹⁵N excess) to both maize and soybean at the beginning of the cropping season. Amounts and isotopic composition of N were determined in above‐ground biomass, soil, adsorbed mineral N, and in soil solution at 0.15, 0.3, 0.8, 1.2 and 2 m depths using suction lysimeters throughout one cropping season. The applied ammonium was rapidly nitrified or immobilized in soil organic matter, and recovery of applied ammonium in soil 2 weeks after application was negligible. Large amounts of nitrate were adsorbed in the subsoil (150–300 kg NO₃^?‐N ha^?1 per 2 m) matching total N uptake by the crops (130–400 kg N ha^?1). Throughout one cropping season, more applied N (49–77%; determined by ¹⁵N tracers) was immobilized in soil organic matter than was present as adsorbed nitrate (2–3%). Most of the applied N (71–96% of ¹⁵N recovery) was found in the subsoil at 0.15–2 m depth. This coincided with an increase with depth of dissolved organic N as a proportion of total dissolved N (39–63%). Hydrophilic organic N was the dominant fraction of dissolved organic N and was, together with nitrate, the most important carrier for applied N. Most of this N (>80%) was leached from the topsoil (0–0.15 m) during the first 30 days after application. Subsoil N retention as both adsorbed inorganic N, and especially soil organic N, was found to be of great importance in determining N losses, soil N depletion and the potential of nitrate contamination of groundwater.     

Borkenkäferbekämpfung an Alleebaumpflanzungen im Sinne der guten fachlichen Praxis im Pflanzenschutz

Zusammenfassung Zur gezielten Anwendung von Insektiziden gegen Borkenkäfer an Ziergehölzen sind Pyrethroid-Präparate zugelassen, die in Streichapplikation aufgebracht werden sollen. Mit Hilfe eines im Handel angebotenen Kleingerätes wurde vom Autor und von Garten- und Landschaftsbau- bzw. Baumschul-Unternehmen die Anwendung praktiziert und die gute Verwendbarkeit des technischen Hilfsmittels festgestellt. Auch die Anwendung eines zur Docht-Streichbehandlung zugelassenen Herbizides wurde erprobt. Ökonomische und ökologische Vorteile des Gerätes im Sinne der guten fachlichen Praxis werden aufgezeigt.