Diurnal variation in thermal environment experienced by salmonids in the North Pacific as indicated by data storage tags

Eight temperature-recording data storage tags were recovered from three salmonids in Alaska (pink and coho salmon and steelhead trout) and five chum salmon in Japan after 21–117 days, containing the first long-term records of ambient temperature from Pacific salmonids migrating at sea. Temperature data imply diel patterns of descents to deeper, cooler water and ascents to the surface. Fish were found at higher average temperatures at night, with narrower temperature ranges and fewer descents than during the day. Fish tagged in the Gulf of Alaska were at higher temperatures on average (10–12°C) than chum salmon tagged in the Bering Sea (8–10°C). Chum salmon were also found at a wider range of temperatures (−1–22°C vs 5–15°C). This is probably related both to the different oceanographic regions through which the fish migrated, as well as species differences in thermal range and vertical movements. Proportions of time that individual fish spent at different temperatures seemed to vary among oceanographic regions. Steelhead trout may descend to moderate depths (50 m) and not be limited to the top few metres, as had been believed. Japanese chum salmon may seek deep, cold waters as they encounter warm surface temperatures on their homeward migrations. Temperature data from all fish showed an initial period (4–21 days) of day and night temperatures near those of sea surface temperatures, suggesting a period of recuperation from tagging trauma. A period of tagging recuperation suggests that vertical movement data from short-term ultrasonic telemetry studies may not represent normal behaviour of fish. The considerable diurnal and shorter-term variation in ambient temperatures suggests that offshore ocean distribution may be linked more to prey distribution and foraging than to sea surface temperatures.     

A new citrus linkage map based on SRAP,SSR, ISSR,POGP, RGA and RAPD markers

Sequence-related amplified polymorphism (SRAP), simple sequence repeats (SSR), inter-simple sequence repeat (ISSR), peroxidase gene polymorphism (POGP), resistant gene analog (RGA), randomly amplified polymorphic DNA (RAPD), and a morphological marker, Alternaria brown spot resistance gene of citrus named as Cabsr caused by (Alternaria alternata f. sp. Citri) were used to establish genetic linkage map of citrus using a population of 164 F₁ individuals derived between ‘Clementine’ mandarin (Citrus reticulata Blanco ‘Clementine) and ‘Orlando’ tangelo’ (C. paradisi Macf. ‘Duncan’ × C. reticulata Blanco ‘Dancy’). A total of 609 markers, including 385 SRAP, 97 RAPD, 95 SSR, 18 ISSR, 12 POGP, and 2 RGA markers were used in linkage analysis. The ‘Clementine’ linkage map has 215 markers, comprising 144 testcross and 71 intercross markers placed in nine linkage groups. The ‘Clementine’ linkage map covered 858 cM with and average map distance of 3.5 cM between adjacent markers. The ‘Orlando’ linkage map has 189 markers, comprising 126 testcross and 61 intercross markers placed in nine linkage groups. The ‘Orlando’ linkage map covered 886 cM with an average map distance of 3.9 cM between adjacent markers. Segregation ratios for Cabsr were not significantly different from 1:1, suggesting that this trait is controlled by a single locus. This locus was placed in ‘Orlando’ linkage group 1. The new map has an improved distribution of markers along the linkage groups with fewer gaps. Combining different marker systems in linkage mapping studies may give better genome coverage due to their chromosomal target site differences, therefore fewer gaps in linkage groups.     

Diffuse mesenteric lipodystrophy (massive fat necrosis) in a cat

Clinical, radiographic, and pathological findings of diffuse mesenteric lipodystrophy in a 3-year-old, female domestic short-haired cat are described. The animal had fallen from a height of approximately 20 metres 6 weeks previously, after which it developed respiratory distress and anorexia. The cat was thin, exhausted and had rapid, shallow, open-mouthed breathing. Serial upper gastrointestinal contrast radiographs showed a prolonged transit time of the contrast medium due to restricted gastric emptying, and filling defects of the duodenojejunal portions of the small intestines. The cranial abdominal cavity contained large, firm, white masses that adhered to most of the anterior abdominal organs. The intestinal walls were completely surrounded by large, hard, lobulated masses of lipomatous tissue. The masses were characterised histologically by extensive areas of coagulative necrosis of adipocytes containing foci of saponification. The lesions resembled those of massive fat necrosis or lipomatosis in cattle, pigs and deer.     

Tuberculosis in geese (Anser anser) in Turkey

Tuberculosis was detected in seven geese at the breeding unit of the Faculty of Veterinary Medicine, Kafkas University, during 1998. In the necropsy, lesions of nodular type were seen in the liver, spleen, and lungs. Histopathologically, the lesions were characterized by central areas of caseous necrosis surrounded by epithelioid cells, multinucleated giant cells, lymphocytes, and an outer fibrous capsule. Acid-fast bacilli were visualized by the Ziehl-Neelsen staining method in paraffin sections and smears. Inoculation into Lowenstein-Jensen media with glycerin yielded Mycobacterium spp.     

Morphological investigations on the circulus arteriosus cerebri in mole-rats (Spalax leucodon)

The aim of the present study is to investigate the circulus arteriosus cerebri in mole-rats (Spalax leucodon). Six adult mole-rats were used for this purpose. Coloured latex was injected into the left ventriculus of the hearts of all the animals. After careful dissection, the circulus arteriosus cerebri (the circle of Willis) was investigated. The cerebrum and the cerebellum were supplied by the internal carotid- and the basilar arteries respectively forming the circulus arteriosus cerebri in mole-rats. In the investigated objects, the internal carotid- and the basilar arteries were not united directly and for this reason the circulus arteriosus cerebri was not formed completely in mole-rat. The branches supplying the medulla oblongata and the cerebellum originate from the basilar artery formed by union of the left and right vertebral arteries and the internal ophthalmic, the caudal cerebral, the choroid, the median cerebral, the rostral cerebral arteries originated from the internal carotid artery. After giving off the medial cerebral artery, the right and left rostral cerebral arteries on every two sides divided into the lateral and medial twin branches and by union of the lateral branches the internal ethmoidal artery, and by union of the medial branches, the ramus extending to facies medialis cerebri were formed. The ramus extending to the facies medialis cerebri was anastomosed with the branch of the caudal cerebral artery on the back of the corpus callosum. The last part of the basilar artery gave the two branches running toward the right and left side on the pontocrural groove (sulcus pontocruralis) and every one of these branches ramified into two rami. One of these rami formed into the rostral cerebellar artery and the other one extended to the tectum mesencephali. In conclusion, the arterial circle of the cerebrum and cerebellum was supplied by the internal carotid artery and the basilar artery respectively in mole-rats.     

Hydraulic properties and water balance of a clay soil cropped with cotton

A field study was carried out in the Cukurova Region, Southern Turkey to investigate the magnitude of the components of water balance, and the water uptake by cotton roots in relation to hydraulic properties of a clay soil. A plot cropped with cotton and with bare soil only were equipped with tensiometers, gypsum blocks, and access tubes for neutron probe to monitor soil water potential and water content.The hydraulic conductivity values, evaporation and drainage rates, and water withdrawal of roots were determined from field data with numerical calculations based on water flow equations.Results showed that the evaporation from bare soil was generally high during the three month period May to July varying between 4.5 and 1.0 mm/day. However, when soil water potential at 10 cm depth had decreased to -0.065 and -0.070 MPa in the drying phase, the evaporation from the soil decreased to 0.4 mm/day. The drainage rates were influenced by rainfall.The highest values of capillary flux toward the surface layer, and drainage rate from the cropped soil, were 2.0 and 1.8 mm/day respectively. Rates of water uptake by roots from the soil profile, not including the 0–10 cm layer, were high when compared with drainage and upward fluxes, changing between 7.7 and 1.4 mm/day during the experimental period. A good agreement between root length densities and water uptake was found; up to 80% of all roots were in the top 50 cm of the soil and 78% of the total water uptake was extracted from the same layer. Evapotranspiration was found to decline as a cubic function of the available water content of the top 120 cm of the soil profile.     

Prediction of the optimum veneer drying temperature for good bonding in plywood manufacturing by means of artificial neural network

Veneer drying is one of the most important stages in the manufacturing of veneer-based composites such as plywood and laminated veneer lumber. Due to the high drying costs, increased temperatures are being used commonly in plywood industry to reduce the overall drying time and increase capacity. However, high drying temperatures can alter some physical, mechanical and chemical characteristics of wood and cause some drying-related defects. In this study, it was attempted to predict the optimum drying temperature for beech and spruce veneers via artificial neural network modeling for optimum bonding. Therefore, bonding shear strength values of plywood panels manufactured from beech and spruce veneers dried at temperatures of 20, 110, 150 and 180 °C were obtained experimentally. Then, the intermediate bond strength values based on veneer drying temperatures were predicted by artificial neural network modeling, and the values not measured experimentally were evaluated. The optimum drying temperature values that yielded the highest bonding strength were obtained as 169 °C for urea formaldehyde and 125 °C for phenol formaldehyde adhesive in beech plywood panels, while 162 °C for urea formaldehyde and 151 °C for phenol formaldehyde in spruce plywood panels.     

Modulating effects of thyme and its major ingredients on oxidative DNA damage in human lymphocytes

The present study was carried out to investigate the modulating effects of thyme and its major components against the oxidative DNA damage induced by H(2)O(2). The human lymphocytes with thymol, carvacrol, and gamma-terpinene incubated with or without 0.1 mM H(2)O(2) for 30 min at 37 degrees C and the DNA damage were evaluated by singe cell gel electropheresis (comet assay). Concentrations above 0.1 mM thymol and gamma-terpinene and 0.05 mM carvacrol significantly induced DNA damage in human lymphocytes, but at the smaller concentrations no additional DNA strand breakage has been observed. At the all concentrations studied, gamma-terpinene did not show any protective effect against H(2)O(2) induced oxidative DNA damage, but the phenolic compounds thymol and carvacrol at concentrations below 0.2 and 0.1 mM, respectively, significantly reduced the oxidative DNA damage (p < 0.001). The n-hexane and ethyl acetate fractions prepared from the methanolic extracts of Thymus spicata also were found to inhibit DNA damage.     

Litterfall in relation to stand parameters and climatic factors in Pinus brutia forests in Turkey

With this study we investigated the effective factors on annual amount of total litterfall and needle litterfall in Pinus brutia forests and estimated them with a regression model based on certain stand parameters. We studied 27 permanent plots representing different stand structure and environmental conditions in South-Western Turkey. Litterfall was collected in three month intervals corresponding to each of four seasons for a three-year period. We found a significant relationship between litterfall and stand properties such as crown closure (%), basal area (m²?ha^?1), stand stem volume (m³?ha^?1), above-ground biomass (t?ha^?1), mean annual volume increment (m³?ha^?1?yr^?1) and site index (T?=?75). Similar relationships also hold true between litterfall and each of such climatic factors as seasonal mean temperature (°C), relative humidity (%) and temperature/precipitation ratio (dimensionless). The mean annual litterfall considerably varied depending on stand characteristics and certain environmental factors. Both needle litterfall and total litterfall may be predicted for long term by regression models using certain stand parameters. Models developed for litterfall of P. brutia forests in this study may be used for national C inventory in Turkey.     

Spatio‐temporal analyses of marine predator diets from data‐rich and data‐limited systems

Accounting for variation in prey mortality and predator metabolic potential arising from spatial variation in consumption is an important task in ecology and resource management. However, there is no statistical method for processing stomach content data that accounts for fine‐scale spatio‐temporal structure while expanding individual stomach samples to population‐level estimates of predation. Therefore, we developed an approach that fits a spatio‐temporal model to both prey‐biomass‐per‐predator‐biomass data (i.e. the ratio of prey biomass in stomachs to predator weight) and predator biomass survey data, to predict “predator‐expanded‐stomach‐contents” (PESCs). PESC estimates can be used to visualize either the annual landscape of PESCs (spatio‐temporal variation), or can be aggregated across space to calculate annual variation in diet proportions (variation among prey items and among years). We demonstrated our approach in two contrasting scenarios: a data‐rich situation involving eastern Bering Sea (EBS) large‐size walleye pollock (Gadus chalcogrammus, Gadidae) for 1992–2015; and a data‐limited situation involving West Florida Shelf red grouper (Epinephelus morio, Epinephelidae) for 2011–2015. Large walleye pollock PESC was predicted to be higher in very warm years on the Middle Shelf of the EBS, where food is abundant. Red grouper PESC was variable in north‐western Florida waters, presumably due to spatio‐temporal variation in harmful algal bloom severity. Our approach can be employed to parameterize or validate diverse ecosystem models, and can serve to address many fundamental ecological questions, such as providing an improved understanding of how climate‐driven changes in spatial overlap between predator and prey distributions might influence predation pressure.