HCV persistence and immune evasion in the absence of memory T cell help

Spontaneous resolution of hepatitis C virus (HCV) infection in humans usually affords long-term immunity to persistent viremia and associated liver diseases. Here, we report that memory CD4+ Tcells are essential for this protection. Antibody-mediated depletion of CD4+ Tcells before reinfection of two immune chimpanzees resulted in persistent, low-level viremia despite functional intra-hepatic memory CD8+ Tcell responses. Incomplete control of HCV replication by memory CD8+ Tcells in the absence of adequate CD4+ Tcell help was associated with emergence of viral escape mutations in class I major histocompatibility complex-restricted epitopes and failure to resolve HCV infection.     

Optimization of elecrospinning process of zein using central composite design

Biodegradable edible sub-micron electrospun zein fibers were prepared using acetic acid as solvent. The solution concentration at three levels: 22, 26 and 30 w/v %, the electrospinning voltage at three levels: 10, 20 and 30 kV, the solution flow rate at three levels: 4, 8 and 12 ml/h and the distance between needle tip and collector at three levels: 10, 15 and 20 cm were studied. Central composite design (CCD) was utilized to modeling the effect of electrospinning parameters of zein solution on average fiber diameters and the data were analyzed using response surface methodology (RSM). Coefficient of determination, R², of fitted regression model was higher than 0.9 for response. The analysis of variance table showed that the lack of fit was not significant for response surface model at 95 %. Therefore, the model for response variable was highly adequate. Results also indicated that the solution concentration had significant influence (P<0.0001) on morphology and diameter of fibers. By increasing the solution concentration, uniform and bead-free fibers were obtained. As the solution concentration was increased, the average fiber diameters were also increased. Furthermore, the electrospinning voltage had significant effect (P<0.0001) on average fiber diameters. By increasing the electrospinning voltage, the average fiber diameters increased. The solution flow rate and the distance between needle tip and collector had no significant influence on the average fiber diameters. According to model optimization, the minimum average fiber diameter of electrospun zein fiber is given by following conditions: 24 w/v % zein concentration, 10 kV of the applied voltage, 10 cm of needle tip to collector distance, and 4 ml/h of solution flow rate.     

Improved model for studying hydrological process in the field-to-field irrigation system

Paddy and Water Environment - One of the common irrigation systems in the paddy fields is field-to-field irrigation. The management of these irrigation systems is difficult and essential because of...     

Salt-affected soils,reclamation, carbon dynamics,and biochar: a review

Purpose

This paper reviews chemical, physical, and biological problems of salt-affected soils and different reclamation methods applied to rehabilitate these soils.

Methods

Methods to increase C stocks in these lands are discussed with a focus on biochar application as a potential new approach to not only to increase the C content but also to improve soil properties. Gaps in research knowledge in this field are then identified.

Results

Given the concern on the continued worldwide expansion of salt-affected lands and the focus on C sequestration processes, this review has evaluated current knowledge on salt-affected soils and their remediation with organic materials and plants. The review of the published literature has highlighted important gaps in knowledge, which limit our current understanding of rehabilitation of salt-affected soils with organic amendments specially biochar and the associated carbon dynamic. Knowledge about application of biochar in salt-affected soils is scant, and to date, most studies have evaluated biochar use only in nonsalt-affected soils.

     

Effects of nickel and PGPBs on growth indices and phytoremediation capability of sunflower (Helianthus annuus L.)

The effect of bacteria inoculation was studied on sunflower growth and phytoremediation capacity in soils contaminated by different levels of nickel. The experimental treatments consisted of four levels of bacteria inoculation – non-inoculated, inoculated by Bacillus safensis, inoculated by Kocuria rosea, and co-inoculated by B. safensis + K. rosea – and four levels of nickel concentrations in the soil – Ni0, Ni150, Ni300, and Ni450 (0, 150, 300, and 450 mg Ni per kg soil, respectively). The treatments were arranged as factorial structure based on a completely randomized design. Results have shown that growth indices, photosynthetic pigments, shoot Fe concentration, root and shoot Zn concentration, and translocation factor decreased as the Ni concentration in soil increased. Shoot and root Ni concentration were higher at Ni450, whereas, the highest Ni uptake by the plant was observed at Ni300 when the sunflower seed was co-inoculated by B. safensis + K. rosea bacteria. Bacteria inoculation significantly increased the plant growth, photosynthetic pigments, and Ni uptake. By B. safensis inoculation, the Fe concentration significantly increased in shoot, while it decreased in root.     

Effects of plant growth-promoting bacteria on the phytoremediation of cadmium-contaminated soil by sunflower

This paper describes the effect of plant growth-promoting bacteria on sunflower growth and its phytoremediation efficiency under Cd-contaminated soils. Four levels of bacteria inoculation (non-inoculation, inoculation by Bacillus safensis, Kocuria rosea and co-inoculation by Bacillus safensis+Kocuria rosea) and four Cd concentrations (0, 50, 100 and 150 mg Cd per kg soil) were arranged as factorial experiment based on a completely randomized design (CRD). Results showed that Cd significantly decreased growth by decreasing the shoot and root length and biomass (p < 0.01). In addition, Cd dramatically decreases photosynthetic pigments, Fe transport to shoot and Zn uptake (p < 0.01). Bacterial inoculation increased Fe and Zn uptake by plants, Cd concentration in the aboveground part of plants and Cd uptake by the enhancement of Cd concentration in plant tissue and biomass production. Results showed that the highest shoot Cd uptake was ?observed in ?inoculated plants by Bacillus safensis at Cd100 (20.35 mg pot^?1). However, in average of Cd treatments, the performance of co-inoculation in Cd uptake (13.04 mg pot^?1) was better than singular inoculation (10.68 and 12.58 mg pot^?1 for Bacillus safensis and Kocuria rosea, respectively). Results revealed that bacterial inoculation increased the Cd uptake performance in shoot and total biomass by 30% and 25%, respectively.     

Yield and yield components of white bean (Phaseolus vulgaris L.) cultivars affected by boric acid rates and methods of application

To investigate the effect of boric acid on yield and yield components of three white bean cultivars consisted of Jules, G11867, and Shekoofa, a 2-year field split-plot experiment was carried out based on a randomized complete block design with three replications during 2013 and 2014. Boron treatments consisted of 1 – control (no boric acid), 2 and 3 – application of 2 and 4?kg ha^?1 of boric acid by irrigation water, respectively, 4 and 5 – foliar spray of 0.025% and 0.05% of boric acid solutions, respectively, and 6 – combination of 2?kg ha^?1 of boric acid in irrigation water?+?foliar spray by 0.025% boric acid solution. Boron application significantly increased yield and its components in respect to control. The highest grain yields of all cultivars were obtained from application of 2?kg ha^?1 boric acid mixed in irrigation water?+?foliar spray by 0.025% of boric acid solution.