Methodology for selective coffee harvesting in management zones of yield and maturation

Precision Agriculture - The non-uniformity of coffee fruit maturation is an intrinsic plant condition that is not favorable for the beverage quality. This could be overcome by using the precision...     

Glomalin‐related soil protein in French temperate forest soils: interference in the Bradford assay caused by co‐extracted humic substances

Thermostable soil protein, known as glomalin, is an important component of soil carbon stocks. Thought to originate from endomycorrhizal fungi, Glomales, this operationally‐defined fraction of soil organic matter contains proteins of diverse origin as well as non‐protein material, including humic substances. Accumulation results from the balance between production/release and subsequent degradation. Quantification of the protein is subject to uncertainty because of the co‐extraction of other components that interfere with the Bradford assay. We studied 10 topsoils from French temperate forests, taken from the national forest monitoring network (Renecofor). Two fractions were extracted, easily extractable (EE) at neutral pH and total extractable (T) at pH 8. Protein was quantified with the colorimetric Bradford method, either by direct calibration using bovine serum albumin (BSA) or by extrapolation of the standard addition plot of BSA. Solubilized organic matter was characterized by using absorbance at 465 and 665 nm and by three‐dimensional fluorescence excitation‐emission spectroscopy. Neither soil properties nor forest cover influenced glomalin‐related soil protein (GRSP) content. Direct assay gave the GRSP_EE to be about 1 g kg^?1 soil, and GRSP_T in the range 3–10 g kg^?1, accounting for about 2% of soil organic carbon and about 15% of soil nitrogen. Standard addition plots indicated a two to sixfold under‐estimation of protein in total extracts, caused by negative interference with the Bradford assay. The GRSP_EE was correlated significantly with both estimates of GRSP_T. Under‐estimation of GRSP_T by direct assay was not related to the E4:E6 ratio but was correlated significantly with the intensity of absorbance at either 460 or 660 nm and with one of the fluorescence peaks. We conclude that GRSP_EE is not necessarily more recent than GRSP_T and that both fractions may be probes of protein content, but that absolute contents may be under‐estimated because of co‐extracted humic substances.     

Different mycorrhizal fungal strains determine plant community response to nitrogen and water availability

Most research on the mycorrhizal positive–negative responsiveness continuum (or “mutualism–parasitism continuum”) has focused on individual plant species growing at different levels of P availability. Here, we explore this continuum in an experimental plant community inoculated with three arbuscular mycorrhizal (AM) fungal strains (both single and mixed) growing under four resource availability scenarios. These scenarios are a factorial combination of two levels of water and N availability. Each AM fungal strain had a different origin: an arid ecosystem, a farmland, and a mine. We hypothesized that the response of the plant community to mycorrhizal inoculum would depend on the associated AM fungal strain and would be negatively related with increased nitrogen and water availability. Our results showed that mixed‐strain AM fungal inoculation had more positive effects along a wider range of water and N availability scenarios than single‐strain inoculation. In contrast, mycorrhizal growth response of plants inoculated with a single AM fungal strain shifted from positive to neutral and negative depending on resource availability. Adaptation of each strain to its local conditions might confer different properties to the mycorrhizal symbiosis. Therefore, we conclude that AM fungal origin and environmental limiting resources are crucial factors to predict plant community mycorrhizal growth response in changing ecosystems.     

Quantile regression: prediction of growth and yield for a eucalyptus plantation in northeast Brazil

European Journal of Forest Research - Regression analysis is a traditional technique to fit equations and predict tree and forest attributes. However, problems may occur when the data show high...     

The effects of ‘Vicia faba L.’ polyphenols on absorption,growth and metabolism in the rat

Two varieties of ‘Vicia faba L.’equina andminor, were studied. Theequina variety had a higher polyphenolic content than theminor variety. Both varieties significantly inhibited rat growth rate and ‘in vivo’ intestinal glucose transport, theequina variety being a more powerful inhibitor than theminor variety. However the raw legume fed animals showed a normal urinary excretion rate of 3-Methylhistidine.     

An efficient immunodetection method for histone modifications in plants

Background

Epigenetic mechanisms can be highly dynamic, but the cross-talk among them and with the genome is still poorly understood. Many of these mechanisms work at different places in the cell and at different times of organism development. Covalent histone modifications are one of the most complex and studied epigenetic mechanisms involved in cellular reprogramming and development in plants. Therefore, the knowledge of the spatial distribution of histone methylation in different tissues is important to understand their behavior on specific cells.

Results

Based on the importance of epigenetic marks for biology, we present a simplified, inexpensive and efficient protocol for in situ immunolocalization on different tissues such as flowers, buds, callus, somatic embryo and meristematic tissue from several plants of agronomical and biological importance. Here, we fully describe all the steps to perform the localization of histone modifications. Using this method, we were able to visualize the distribution of H3K4me3 and H3K9me2 without loss of histological integrity of tissues from several plants, including Agave tequilana, Capsicum chinense, Coffea canephora and Cedrela odorata, as well as Arabidopsis thaliana.

Conclusions

There are many protocols to study chromatin modifications; however, most of them are expensive, difficult and require sophisticated equipment. Here, we provide an efficient protocol for in situ localization of histone methylation that dispenses with the use of expensive and sensitive enzymes. The present method can be used to investigate the cellular distribution and localization of a wide array of proteins, which could help to clarify the biological role that they play at specific times and places in different tissues of various plant species.

     

A Clinical Survey Evaluating the Prevalence of Incisor Disorders in Zamorano-Leonés and Mirandês Donkeys (Equus asinus)

Recent clinical and post-mortem studies documented a high prevalence of dental disorders in donkeys, but less information appears to be available specifically about incisor disorders in donkeys. A study to investigate the prevalence of oral and dental disorders affecting incisor teeth was performed, in two endangered breeds of donkeys: the Mirandês Donkey and the Zamorano-Leonés Donkey, through a prospective cross-sectional study in 800 donkeys, divided in 7 age groups (ranging 0-34 years), in 86 villages inside their geographic area of distribution, thinking on welfare and genetic preservation issues. The 74% of donkeys suffer from incisors disorders, ranging from 56.8% in the youngest group to 90.3% in group 7. Craniofacial abnormalities (49.25%), abnormalities in the occlusal surface (21.63%), fractures (17%), periodontal disease (16.13%) and diastemata (14.38%) were the main disorders recorded. Incisors disorders are significant, presenting at a much higher prevalence when compared to other studies involving the incisor teeth of equids, affecting all ages but particularly in older animals. This study provide essential information in dentistry applied to donkeys but also highlighted the importance of regular dental care in endangered breeds, improving their welfare and preserving a unique genetic heritage.     

Methods for Equine Preantral Follicles Isolation: Quantitative Aspects

The aim of this study was to test the use of mechanical and mechanical‐enzymatic methods, saline solution (SS), and PBS solution for the manipulation and isolation of mare ovarian preantral follicles (PAFs). The ovaries were subjected to mechanical isolation (mixer) alone or in association with enzymatic digestion (collagenase). Incubation times of 10 and 20 min were employed. In the first group, 4.1 ± 4.9 PAFs were harvested with the mechanical‐enzymatic method vs 71.1 ± 19.2 with the mechanical procedure, showing a significant difference between methods; using SS and PBS, these numbers were 35.7 ± 34.3 and 39.6 ± 39.6, respectively, with no significant difference between solutions. In the second group, there was significant difference between methods, with 7.1 ± 10.6 follicles harvested with the mechanical‐enzymatic method vs 63.2 ± 22.9 with the mechanical procedure; using SS and PBS, means were 35.5 ± 36.4 and 34.9 ± 31.1, respectively. The mechanical method proved more effective than the mechanical‐enzymatic approach. Both SS and PBS can be used as a media for equine PAFs preparation.     

Performance and characteristics of carcass and non-carcass components of lambs fed peach-palm by-product

The objective of this study was to evaluate the effects of supplying the by-product of peach-palm (Bactris gasipaes) on performance and characteristics of carcass and non-carcass components of feedlot lambs. Twenty Santa Ines lambs of 150 days average age and 22.4?±?3.4 kg body weight were confined in individual pens. A completely randomized design was utilized with four experimental diets composed of: fresh peach-palm by-product enriched with urea, fresh peach-palm by-product + concentrate, silage of peach-palm by-product + concentrate, and silage of peach-palm by-product enriched with 15 % corn meal + concentrate. Intake was evaluated daily, and at the end of 42 days of experiments, lambs were slaughtered and the characteristics of carcass and non-carcass parts were evaluated. Performance and carcass characteristics showed differences between the animals’ intake of total mixed rations (TMR) and only the diet with roughage. For the lambs that intaked TMR, the form of utilization of roughage (fresh or as silage) affected animal performance but did not change the carcass characteristics. Dry matter intake and feed conversion were influenced by the form of utilization of the silage (with and without additive). Providing fresh by-product plus concentrate improves lamb performance but does not interfere in the carcass characteristics, compared with the use of by-product in the form of silage.     

Importance of the horse and financial impact of equine trypanosomiasis on cattle raising in Venezuela

In Venezuela, horses are indispensable for extensive cattle raising, and extensive cattle raising prevails in all regions. This determines the numerical relationship between horses and cattle (r?=?0.93) to be relatively constant nationwide. At regional level, the average extension of cattle ranches varies greatly. However, in relation to the area covered by pastures, the numbers of horses (r?=?0.95) and cattle (r?=?0.93) are relatively uniform nationwide. Water buffalo occupy small fractions of the territory; therefore, their numbers are related to the area of pastures less strongly (r?=?0.56). There is no information on the numerical relationship between the numbers of horses and water buffalo. In the Llanos region of the country, equine trypanosomiasis is responsible for a high mortality in horses, causing considerable financial losses to cattle ranches. So far, such losses have not been assessed. For this region, in 2008, it can be calculated that: (1) with no treatment, losses owing to horse mortality caused by this hemoparasitosis would have amounted to US$7,486,000; (2) the diagnosis and treatment of affected horses would have required an investment of US$805,000; and (3) in terms of horses saved, this investment would have resulted in benefit of US$6,232,000. Therefore, for every monetary unit invested, there would be a benefit 7.75 times greater, this ratio being applicable to any year and all regions of the country. It follows that the profitability of investing in the diagnosis and treatment of equine trypanosomiasis is guaranteed.