Species distribution models applied to plant species selection in forest restoration: are model predictions comparable to expert opinion?

An expert on local flora usually is the best option for plant species selection in most ecological restoration projects; although species selection often needs to be dealt with swiftly as well as on a limited budget, and obtaining the opinion of a local expert may not always be an economically viable alternative. In such cases, species distribution models (SDM) may offer a faster and more cost effective alternative. We asked six experts to rank native tree species according to their suitability at 24 forest sites. The predictive performance of the suitability rankings was evaluated by assessing their ability to discriminate present from absent species in the observed tree assemblages at each evaluation site. We used the area under the receiver operating characteristic curve to calculate the probability that the estimated suitability for a species present at a particular evaluation site is greater than the estimate for an absent species (both picked at random). Suitability rankings were also obtained from the predictions of SDM and the same procedure was used to estimate the predictive performance of the set of models at each site. The experts offered concordant suitability rankings at almost every evaluation site. There were no significant differences in the predictive performance of the SDM and four of the experts, although the SDM performed slightly better than the other two experts. Our results point to the suitability of the proposed species distribution modeling approach to obtain fast and cost effective recommendations for species selection in forest restoration projects.     

Short-term changes in the soil carbon stocks of young oil palm-based agroforestry systems in the eastern Amazon

The current expansion of the oil palm (Elaeis guineensis Jacq.) in the Brazilian Amazon has mainly occurred within smallholder agricultural and degraded areas. Under the social and environmental scenarios associated with these areas, oil palm-based agroforestry systems represent a potentially sustainable method of expanding the crop. The capacity of such systems to store carbon (C) in the soil is an important ecosystem service that is currently not well understood. Here, we quantified the spatial variation of soil C stocks in young (2.5-year-old) oil palm-based agroforestry systems with contrasting species diversity (high vs. low); both systems were compared with a ~10-year-old forest regrowth site and a 9-year-old traditional agroforestry system. The oil palm-based agroforestry system consisted of series of double rows of oil palm and strips of various herbaceous, shrub, and tree species. The mean (±standard error) soil C stocks at 0–50 cm depth were significantly higher in the low (91.8 ± 3.1 Mg C ha^?1) and high (87.6 ± 3.3 Mg C ha^?1) species diversity oil palm-based agroforestry systems than in the forest regrowth (71.0 ± 2.4 Mg C ha^?1) and traditional agroforestry (68.4 ± 4.9 Mg C ha^?1) sites. In general, no clear spatial pattern of soil C stocks could be identified in the oil palm-based agroforestry systems. The significant difference in soil carbon between the oil palm area (under oil palm: 12.7 ± 2.3 Mg C ha^?1 and between oil palm: 10.6 ± 0.5 Mg C ha^?1) and the strip area (17.0 ± 1.4 Mg C ha^?1) at 0–5 cm depth very likely reflects the high input of organic fertilizer in the strip area of the high species diversity oil palm-based agroforestry system treatment. Overall, our results indicate a high level of early net accumulation of soil C in the oil palm-based agroforestry systems (6.6–8.3 Mg C ha^?1 year^?1) that likely reflects the combination of fire-free land preparation, organic fertilization, and the input of plant residues from pruning and weeding.     

Local and remote physical processes driving variability of the planktonic system in the Juan Fernández Archipelago: A multidisciplinary framework providing conservation insights

1. The Juan Fernandez Ridge, a vulnerable marine ecosystem located far off the coast of central Chile and formed by several seamounts, guyots and three islands (Robinson Crusoe, Santa Clara and Alejandro Selkirk), has recently been declared a Coastal Marine Protected Area of Multiple Uses with several National Parks embedded in it.
2. Recent studies have highlighted the influence of remote and local oceanographic structures on the hydrographic dynamics of this ridge. However, there is still a gap in understanding how they affect the structure and dynamics of the surrounding insular planktonic communities.
3. A hydroacoustic and oceanographic survey was conducted during the austral spring (October 2016), including hydrographic and zooplankton sampling around Robinson Crusoe Island. Oceanographic features were identified and tracked using satellite data (chlorophyll-a (Chl-a) and sea surface temperature) and modelling results.
4. Two events of Chl-a increase relative to a threshold (>0.45 mg m⁻³) were forced by different physical processes, both affecting the western side of Robinson Crusoe Island. In event A during the cruise period, Chl-a subsurface maxima were associated with the arrival of a coastal meander originating on the continental shelf off Chile (remote process); the zooplankton was dominated by copepods and salps, with an evident coastal–oceanic gradient. In event B, Chl-a maxima were linked to a local upwelling forced by the intensification of a localized SSW wind. No influence of remote eddies or local Von Kármán vortices on Chl-a distribution was observed.
5. These findings highlight the influence of remote and local physical processes on the structure of planktonic communities around Robinson Crusoe Island. Understanding the variability of these mechanisms and their effects at the base of the pelagic food web is critical in adopting an ecosystem-level approach.

     

Effect of hypo- and hyper-saline conditions on osmolarity and fatty acid composition of juvenile shrimp Litopenaeus vannamei (Boone, 1931) fed low- and high-HUFA diets

Litopenaeus vannamei (Boone) grown in ponds are exposed to salinities of less than 5 g L^?1 during inland shrimp culture or to more than 40 g L^?1 from evaporation and reduced water exchange in dry, hot climates. However, dietary requirements for shrimp grown in low or high salinities are not well defined, particularly for fatty acids. Feeding shrimp postlarvae with highly unsaturated fatty acids (HUFA) enhances tolerance to acute exposure to low salinity, as a result of better nutritional status, or/and specific effects of HUFA on membrane function and osmoregulation mechanisms. This study analysed the effect of HUFA supplementation (3% vs. 34%) on L. vannamei juveniles reared for 21 days at low (5 g L^?1), medium (30 g L^?1) and high salinities (50 g L^?1). Juveniles grown at 5 g L^?1 had lower survival compared with controls (30 g L^?1) or shrimp grown at 50 g L^?1, but no significant effect on survival was observed as a result of HUFA enrichment. In contrast, growth was significantly lower for shrimp grown at 50 g L^?1, but this effect was compensated by the HUFA‐enriched diet. Osmotic pressure in haemolymph was affected by salinity, but not by HUFA enrichment. Shrimp fed HUFA‐enriched diets had significantly higher levels of eicosapentaenoic acid and docosahexaenoic acid in hepatopancreas and gills. These results demonstrate that growth at high salinities is enhanced with diets containing high HUFA levels, but that HUFA‐enriched diets have no effect on shrimp reared at low salinities.     

Residential movements of top predators in Chile’s most isolated marine protected area: Implications for the conservation of the Galapagos shark,Carcharhinus galapagensis,and the yellowtail amberjack,Seriola lalandi

1. Marine protected areas (MPAs) are becoming a widely used tool for the conservation of biodiversity and for fishery management; however, most of these areas are designed without prior knowledge of the basic ecological aspects of the species that they are trying to protect.
2. This study investigated the movement of two top predators: the Galapagos shark, Carcharhinus galapagensis, and the yellowtail amberjack, Seriola lalandi, in and around the Motu Motiro Hiva Marine Park (MMHMP) using MiniPAT satellite tags to determine the effectiveness of this MPA for the protection of these species.
3. The Galapagos sharks (n = 4) spent most of their tag deployment periods inside the MMHMP. However, high intraspecific variability was observed in their movement dynamics. Daily individual maximum movements ranged from 17 to 58 km and the maximum distance from Salas y Gómez Island, the only emergent island within the MMHMP, ranged from 31 to 139 km.
4. The maximum linear distance travelled for a female juvenile Galapagos shark (152 cm total length) was 236 km, which is greater than the maximum distance previously documented for juveniles of this species (<50 km).
5. For the yellowtail amberjack (n = 1), 91% of the satellite geolocations were within the MMHMP, with a maximum daily distance travelled of 6 km. The maximum distance travelled between points was 111 km and the maximum distance from Salas y Gómez Island was 62 km.
6. All archival tagged fish spent most of their time at depths of <50 m and never left the epipelagic zone. Daytime versus night-time differences were pronounced in all individuals but showed high interindividual variability.
7. This study provides a baseline on the movement of these two top predators in the MMHMP and provides valuable insights for the creation of MPAs in the region and elsewhere.

     

Genetic structure of Orbicella faveolata population reveals high connectivity among a marine protected area and Varadero Reef in the Colombian Caribbean

1. The protection of ecosystems with high diversity, such as coral reefs, is not an approach that guarantees their conservation. Thus, maintaining connectivity among coral populations over the long term is a strategy that should be adopted in order to protect diversity and ecological processes. Although coral reefs in Colombia are highly diverse, the population genetics baseline data of keystone species such as Orbicella faveolata are limited.
2. To provide current information about the connectivity between populations of O. faveolata in the Colombian Caribbean, the genetic diversity and distribution of O. faveolata was evaluated with analysis of molecular variance (AMOVA), principal components, and migration estimations using 113 genets distributed in six populations. Also, a genetic structure analysis that included the available data for the Caribbean population was conducted, seeking to understand how the Colombian populations relate to the broader region.
3. According to the global fixation index (F_ST) for the Colombian Caribbean, there was no genetic structure (F_ST = 0.002). Discriminant analysis of principal components (DAPC) showed that Corales del Rosario Archipelago (CR), Este de Isla Fuerte (EIF), San Bernardo Archipelago (SB), and Varadero Reef (VR) were grouped with Oeste de Isla Fuerte (OIF), with Bushnell (BS) representing the most divergent cluster. Migration analysis showed relatively high migration from VR to CR and SB, highlighting the importance of VR as a genetic reservoir for the region. Structure analysis showed that the Colombian population presented a specific genetic identity (F_ST = 0.254), suggesting that the Colombian Caribbean population could be a peripheral population that contributes significantly to genetic variation and is connected through a complex connectivity process.
4. In conclusion, the estimated genetic connectivity reflects the influence of sea surface dynamics over the interpopulation exchange dynamics and the role of protected and nonprotected coral reef in the Colombian Caribbean. Thus, the Colombian Caribbean population of O. faveolata could be relevant to the conservation of genetic diversity on a larger scale.

     

Drivers for spatial modelling of a critically endangered seabird on a dynamic ocean area: Balearic shearwaters are non-vegetarian

1. Spatial modelling is an important research tool to improve our knowledge about the distribution of wildlife in the ocean. Using different modelling techniques (MaxEnt and a generalized linear mixed model), a predictive habitat suitability model was developed for one of the most threatened seabirds in the world: the Balearic shearwater, Puffinus mauretanicus.
2. Models were developed using a 10-year dataset from the Gulf of Cádiz (on the south-western Iberian Peninsula), a key foraging area for Balearic shearwaters during migration and the non-breeding season.
3. Predictive habitat maps strongly matched the observed distribution patterns, pointing to bathymetric features as the main modelling drivers. The species was concentrated on shallow areas (up to approximately 100 m in depth) of the continental shelf, very close to the mouth of the Guadalquivir River. In contrast with previous studies, Balearic shearwater distribution in the highly dynamic Gulf of Cádiz was not correlated with areas of high chlorophyll a concentration.
4. This lack of spatial correlation probably arises from the delay between the phytoplankton bloom and the response of the zooplankton and small fish that are preyed upon by Balearic shearwaters, which may result in important displacements of this trophic chain across the Gulf of Cádiz.
5. The analysis presented contributes to a better understanding of the spatial distribution and ecology of the critically endangered top predator in the Gulf of Cádiz and offers important information to improve management plans.

     

Using ecological trajectories to track long-term taxonomic and functional changes in benthic shallow soft-bottom communities (Bay of Saint-Brieuc,English Channel)

1. Taxonomic and functional trajectories of benthic assemblages were studied in shallow soft-bottom sediments in the bay of Saint-Brieuc (Western English Channel). Changes were assessed at different spatial and temporal scales using a macrobenthic dataset based on 38 stations sampled in 1987 and 2019, coupled with data from one station sampled annually between 2005 and 2019 as part of the European Water Framework Directive monitoring programme.
2. Taxonomic trajectories indicated 1) changes in the structure and distribution of benthic assemblages, 2) an homogenization of the assemblages, and 3) significant functional shifts.
3. Fishing activities and nutrient enrichment are probably strong drivers of the observed changes, as suggested by the higher mortality rate of fragile, flexible, tubiculous and burrowing species, and the increase in the abundance of opportunistic species in the assemblages. Certain populations of macroinvertebrates seem jointly controlled by climate change and by the aforementioned local factors of disturbance.
4. The Community Trajectory Analysis framework appears as a new and interesting method to track ecological changes in marine ecosystems by measuring change with respect to a baseline state, to help define ecological recovery (station returning to the initial ecological state) and departure (station presenting increased changes over time), and to analyse trajectory similarity.
5. According to the degradation of habitat over time, we identify the need for the implementation of knowledge-based conservation strategies, especially within Natura 2000 sites.

     

Treatment Method Affects Color,Chemical, and Mineral Composition of Seabream (Sparus aurata) Fish Bone Powder from by-Products of Fish Fillet

ABSTRACT

Seabream fish bone powder was produced using different chemical methods and tap water. The effect of different chemical procedures (sodium hydroxide (NaOH); NaOH + citric acid; NaOH + sodium hypochlorite (NaOCl); NaOH + ethanol (EtOH); and NaOH + hydrogen chloride (HCl)) and tap water on proximate composition, yield, mineral composition, color, and sensorial odor was investigated. Despite its high bone powder yield (59.39%), tap water treatment was not an efficient method due to low calcium (Ca²⁺, 232.13 g/kg) and phosphorus (P, 111.63 g/kg) concentration and heavy fish odor. Sensorial odor analysis of seabream fish bone powder showed that tap water received the lowest scores (1.71/5), while chemically treated samples received sensorial odor scores higher than 4.00, with an average of 4.61, indicating that they had a very slight odor. The best fish bone powder yield was obtained using NaOH treatment (21.46%), where Ca²⁺ (276.73 g/kg) and P (147.23 g/kg) content was also high. The utilization of chemicals in combination with NaOH did not increase the sensorial odor score of seabream fish powders but resulted in a decrease in powder yield. Moreover, the mineral composition of all chemical processing techniques was comparable. Processing by-products of seabream fillet production with 8% NaOH will contribute to daily Ca²⁺ and P intake of individuals.