Genetic dissection of bacterial speck disease resistance in tomato

The bacterial speck disease of tomato has been developed as a model system to elucidate the molecular basis of specificity in plant-bacterial interactions and to study signal transduction events involved in the expression of plant disease resistance. We have employed a mutagenic approach to define the steps involved in the expression of disease resistance to the bacterial pathogen, Pseudomonas syringae pv. tomato (Pst) Eleven disease susceptible mutants have been identified and characterized twith altered recognition of Pst strains that express the avirulence gene avrPto. Genetic analysis of these mutants has revealed that they fall into two complementation groups. Five of the mutants map at the Pto locus, while six map a new locus that we have termed Prf. Further characterization of these mutants has revealed that the mutants that map at Pto are still sensitive to the insecticide fenthion, while the prf mutants are altered in resistance and also are insensitive to fenthion. Genetic mapping has also determined that the Prf locus maps near Pto. We are currently employing a map-based cloning strategy to isolate the Prf locus.     

Coronavirus main proteinase (3CLpro) structure: basis for design of anti-SARS drugs

A novel coronavirus has been identified as the causative agent of severe acute respiratory syndrome (SARS). The viral main proteinase (Mpro, also called 3CLpro), which controls the activities of the coronavirus replication complex, is an attractive target for therapy. We determined crystal structures for human coronavirus (strain 229E) Mpro and for an inhibitor complex of porcine coronavirus [transmissible gastroenteritis virus (TGEV)] Mpro, and we constructed a homology model for SARS coronavirus (SARS-CoV) Mpro. The structures reveal a remarkable degree of conservation of the substrate-binding sites, which is further supported by recombinant SARS-CoV Mpro-mediated cleavage of a TGEV Mpro substrate. Molecular modeling suggests that available rhinovirus 3Cpro inhibitors may be modified to make them useful for treating SARS.     

Differential response of short‐ and long‐duration cassava cultivars to applied mineral nitrogen

The differential response of two contrasting cassava cultivars to different rates of soil‐applied nitrogen (N) on the number of tuberous roots, harvest index, yield, nitrogen uptake, and fertilizer‐nitrogen‐use efficiency was studied over a period of 2 years on a typic Plinthustults in Kerala state in Southern India. The experiment was laid out in a split‐plot design with two popular cultivars of cassava, namely Sree Vijaya (6 months) and M‐4 (10 months) in the main plots, and eight urea‐N rates (0, 12.5, 25, 50, 75, 100, 150, and 200 kg ha^–1) in subplots. Half of the N was applied at the time of planting and the other half 60 d later. The study revealed significant differences between the two cultivars regarding their response to fertilizer‐N application. The tuberous‐root yield of the short‐duration cultivar Sree Vijaya increased significantly up to 100 kg N ha^–1 whereas the yield of the long‐duration cultivar M‐4 increased significantly only up to 50 kg N ha^–1 rate. Also the N‐use‐efficiency parameters (i.e., agronomic, recovery, and physiological efficiencies) were higher in Sree Vijaya than in M‐4 but declined at N rates beyond 100 kg ha^–1. The more efficient N use in the short‐duration cultivar was associated with a higher N uptake and a more efficient internal use.