Inhibition of Iron Induced Lipid Peroxidation and Antioxidant Activity of Indian Spices and Acacia In Vitro

The spices used in the Indian foods such as Star anise (Illicium verum), Bay leaves (Cinnamomum zeylanicum) and Cobra’s saffron (Mesua ferrea), and Acacia (Acacia catechu), which have medicinal value, were used as test samples, to find their effect on in vitro lipid peroxidation (LPO). Rat liver post mitochondrial supernatant (PMS) in Tris HCl buffer, pH 7.4 was incubated for 0 and 1 h, with various test extracts in three different oxidant systems. The results show that addition of test samples to FeCl₃ medium at 0 h significantly stop the initiation of the LPO. However, the propagation phase of LPO was inhibited by Cobra’s saffron and Acacia and not by Star anise and Bay leaves. The test samples also showed strong reducing power and superoxide radical scavenging activity. Cobra’s saffron and Acacia showed the highest antioxidant activity, probably due to the higher polyphenol content as compared to other test samples.     

Hairpin-based virus resistance depends on the sequence similarity between challenge virus and discrete,highly accumulating siRNA species

Virus resistance can be effectively generated in transgenic plants by using the plant’s silencing machinery. To study the specificity of gene-silencing-based resistance, homozygous tobacco (Nicotiana tabacum L.) plants containing a 597-nt hairpin RNA construct of the Potato Virus Y (PVY) replicase sequence were challenged with a variety of PVY strains. The transgene-carrying tobacco line was immune to five potato PVY strains with high sequence similarity (88.3–99.5%) to the transgene. Infection with more distant tomato and pepper PVY field strains (86–86.8% sequence similarity) caused delayed symptom appearance in the transgenic tobacco. Transgene production of small interfering (si) RNA was detected by northern blot and measured using a custom-designed microarray for the detection of small RNAs. siRNA accumulation peaks were observed throughout the inverted-repeat transgene. In the resistance-breaking tomato and pepper strains there were nucleotide differences in the sequences correlated to siRNA transgene accumulation, indicating the role of siRNA specificity in resistance breaking. The log of transgene siRNA signal intensity increased with probe GC content, indicating that the accumulating siRNA molecules were GC-rich. Sequence similarity of highly accumulating siRNAs with the target virus strain appears to be important for both resistance and resistance-breaking characteristics.     

Removal of Trinitrotoluene with Nano Zerovalent Iron Impregnated Graphene Oxide

Nano zerovalent iron (nZVI) impregnated reduced graphene oxide (nZVI-rGO) hybrid was prepared via gaseous hydrogen reduction of anhydrous iron(III) chloride (FeCl₃) on the surface of thermally exfoliated reduced graphene oxide (rGO) nanosheets without using any toxic reducing agent, surfactant, or stabilizing agent. Characterization of prepared samples was carried out using various techniques. Morphological study showed that prepared rGO possesses a few-layered wrinkled paper-like structures and nZVI particles of ~?30 nm size were homogeneously dispersed on the surface of rGO nanosheets. Fourier transform infrared (FTIR), X-ray diffraction (XRD), and energy dispersive X-ray spectrometry (EDS) analyses indicated that oxygen-containing functional groups decreased in the order of graphite oxide (GO) > rGO > nZVI-rGO. Removal studies of trinitrotoluene (TNT) were carried out using graphite (G), GO, rGO, and nZVI-rGO with the aid of high-performance liquid chromatography (HPLC). Kinetic models were applied to establish the rate and mechanism of adsorption of TNT on different adsorbents, and intraparticle diffusion model based on initial adsorption characteristics was employed to ascertain mechanism of film and intraparticle diffusion in the adsorption process. The removal rate and adsorption capacity was found to be highest for nZVI-rGO, which renders this adsorbent to be a potential futuristic adsorbent for removal of explosives.

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A novel approach to denitrification processes in a zero-discharge recirculating system for small-scale urban aquaculture

This paper presents an innovative process to solve the nitrate build-up problem in recirculating aquaculture systems (RAS). The novel aspects of the process lie in a denitrification bioreactor system that uses solid cotton wool as the primary carbon source and a unique degassing chamber. In the latter, the water is physically stripped of dissolved gaseous O₂ (by means of a Venturi vacuum tube), and the subsequent denitrification becomes more efficient due to elimination of the problems of oxygen inhibition of denitrification and aerobic consumption of cotton wool. The cotton wool medium also serves as a physical barrier that traps organic particles, which, in turn, act as an additional carbon source for denitrification. Operation in the proposed system gives an extremely low C/N ratio of 0.82 g of cotton wool/g of nitrate N, which contributes to a significant reduction of biofilter volume. The additional advantage of using solid cotton wool as the carbon source is that it does not release organic residuals into the liquid to be recycled. Operation of the system over a long period consistently produced effluents with low nitrate levels (below 10 mg N/l), and there was only a very small need to replace system water. The overall treatment scheme, also incorporating an aerobic nitrification biofilter and a granular filtration device, produced water of excellent quality, i.e., with near-zero levels of nitrite and ammonia, a sufficiently high pH for aquaculture, and low turbidity. The proposed system thus provides a solution for sustainable small-scale, urban aquaculture operation with a very high recovery of water (over 99%) and minimal waste disposal.     

Contribution of biodiversity to ecosystem functioning:a non-equilibrium thermodynamic perspective

Ecosystem stays far from thermodynamic equilibrium. Through the interactions among biotic and abiotic components,and encompassing physical environments,ecosystem forms a dissipative structure that allows it to dissipate energy continuously and thereby remains functional over time. Biotic regulation of energy and material fluxes in and out of the ecosystem allows it to maintain a homeostatic state which corresponds to a self-organized state emerged in a non-equilibrium thermodynamic system. While the associated self-organizational processes approach to homeostatic state,entropy(a measure of irreversibility) degrades and dissipation of energy increases. We propose here that at a homeostatic state of ecosystem,biodiversity which includes both phenotypic and functional diversity,attains optimal values. As long as biodiversity remains within its optimal range,the corresponding homeostatic state is maintained. However,while embedded environmental conditions fluctuate along the gradient of accelerating changes,phenotypic diversity and functional diversity contribute inversely to the associated self-organizing processes. Furthermore,an increase or decrease in biodiversity outside of its optimal range makes the ecosystem vulnerable to transition into a different state.     

Single-bead immunoassays using magnetic microparticles and spectral-shifting quantum dots

This paper reports a single-bead immunoassay method based on the combined use of magnetic microparticles (MMPs) for target capturing/enrichment and antibody-conjugated semiconductor quantum dots (QDs) for fluorescence detection. In comparison with organic dyes and fluorescent proteins, QDs exhibit unique optical properties such as size-tunable fluorescence emission (spectral shifting), large absorption coefficients, improved brightness, and superior photostability. Magnetic beads, composed of iron oxide nanoparticles embedded in polymeric matrices, provide a platform for rapid capturing and enrichment of biomolecules and pathogens in dilute biological and environmental samples. However, a major problem in using magnetic beads for fluorescence immunoassays is that the bead's autofluorescence strongly interferes with the target detection signal. This spectral overlapping problem can be overcome by using semiconductor QDs as a new class of spectral-shifting labels. By shifting the QD emission signals away from the bead autofluorescence, it is possible to detect biomolecular antigens such as tumor necrosis factor (TNF-alpha) at femtomolar (10-15 M) concentrations when the target molecules are captured and enriched on the magnetic bead surface. This sensitivity is almost 1000 times higher that that of traditional immunoabsorbent assays and more than 100 times higher than immunofluorescent assays using organic dyes.     

A single progenitor population switches behavior to maintain and repair esophageal epithelium

Diseases of the esophageal epithelium (EE), such as reflux esophagitis and cancer, are rising in incidence. Despite this, the cellular behaviors underlying EE homeostasis and repair remain controversial. Here, we show that in mice, EE is maintained by a single population of cells that divide stochastically to generate proliferating and differentiating daughters with equal probability. In response to challenge with all-trans retinoic acid (atRA), the balance of daughter cell fate is unaltered, but the rate of cell division increases. However, after wounding, cells reversibly switch to producing an excess of proliferating daughters until the wound has closed. Such fate-switching enables a single progenitor population to both maintain and repair tissue without the need for a "reserve" slow-cycling stem cell pool.     

Acute and Chronic Effects of Nitrite on White Shrimp, Litopenaeus vannamei, Cultured in Low-Salinity Brackish Water

The marine white shrimp Litopenaeus vannamei is widely cultured. Recently, farmers have begun to culture this shrimp in low-salinity brackish water (< 6 g/L). The intensification of shrimp culture often results in occurrences of elevated nitrite concentration during the growing season. Nitrite is toxic to shrimp and exposure to high concentrations may cause retarded growth and mortalities. The current study was aimed at investigating the acute and chronic toxicity of nitrite to L. vannamei grown in low-salinity (2 g/L) brackish water. Studies of the 96-h EC50 and LC50 values of nitrite were performed to determine the acute toxicity, and an aquarium growth study (2 d post exposure to elevated nitrite concentrations) was conducted to evaluate the chronic effects of nitrite on shrimp production. The 96-h EC50 and LC50 values for juvenile L. vannamei grown in water of 2 g/L salinity was about 9 mg/L NO₂-N, suggesting a safe concentration for shrimp production in ponds to be less than 0.45 mgIL NO₂-N. Exposing shrimp to nitrite concentration of 4 mg/L for 2 d reduced their growth but did not affect their survival.     

Identification of malodorous, a wild species allele affecting tomato aroma that was aelected against during domestication

Vegetable cultivation favored the inclusion of pleasant aromas in the produce, whereas unpleasant aromas were selected against. Introgression lines, generated by hybridization of a cultivated tomato (Lycopersicon esculentum) to its wild relative L. pennellii, were used to map quantitative trait loci (QTL) that influence tomato aroma. A marked undesirable flavor was detected by taste panelists in L. pennellii fruits and was related to an introgressed segment from the short arm of chromosome 8. Analysis of the ripe fruits' volatiles of chromosome 8 introgressed lines revealed an up to 60-fold increase in the levels of 2-phenylethanol and phenylacetaldehyde, as compared to the cultivated tomato. This effect was associated with a 10 cM segment originating from the wild species. Although 2-phenylethanol and phenylacetaldehyde have favorable contribution to tomato aroma when present at low levels, phenylacetaldehyde has a nauseating objectionable aroma when present in levels >0.005 ppm. The loss of the ability to produce high levels of phenylacetaldehyde contributed to the development of desirable aroma of the cultivated tomato. The findings provide a genetic explanation for one of the aroma changes that occurred during the domestication of the tomato.