Freely dissolved PCDD/F concentrations in the Frierfjord,Norway: comparing equilibrium passive sampling with “active” water sampling

Introduction  

Equilibrium passive samplers consisting of 55-μm polyoxymethylene (POM) and 170-μm polydimethylsiloxane were tested for the analysis of polychlorinated dibenzodioxin/furan (PCDD/F) in the pore water and overlying water of the Frierfjord, a bay in southern Norway. This fjord is heavily polluted with PCDD/Fs due to emissions from a former Mg smelter.     

Comparison of phosphorus fractions and alkaline phosphatase activity in sludge,soils, and sediments

Purpose  

The land application or disposal of sewage sludge generally leads to phosphorus (P) loss in aquatic environments and often results in eutrophication. The nature of P fractions plays a key role in the transport of P within the environment, and alkaline phosphatase is important for the transformation of the P fractions. The objective of this study was to assess the P fractions and alkaline phosphatase activity in sewage sludge, soils, and sediments, in order to effectively evaluate their P bioavailability and mobility.     

Coupled Effects of Electrical Stimulation and Antibiotics on Microbial Community in Three-Dimensional Biofilm-Electrode Reactors

Antibiotics are often misused or overused, resulting in large residue inputs in the environment. Electricity and antibiotics were regarded as potentially important factors, which impact on the microbial community during treatment of antibiotics in three-dimensional biofilm-electrode reactors (3D-BERs). Unfortunately, only a few studies have been reported yet. Four 3D-BERs and one 3D-BR (reactor with biological sludge and no voltage) were designed to assess the effect of low current, sulfamethoxazole (SMX), and tetracycline (TC) on microbial populations. The 3D-BERs achieved excellent removal efficiencies of 72.20–93.52 and 82.61–95.80% for SMX and TC, respectively. Microorganisms were classified into 58 phyla, 125 classes, 166 orders, 187 families, and 220 genera. Proteobacteria held the overwhelming predominance, followed by Bacteroidetes, Chloroflexi, Actinobacteria, Verrucomicrobia, Firmicutes, and Acidobacteria. The 3D-BERs achieved higher richness of microbial composition compared with the 3D-BR. Microbial communities and relative abundance at the phyla level were affected by low current. The microbial communities in the 3D-BERs were similar at the genus level, even with different antibiotic concentrations. However, the relative abundances and compositions of the microbial communities decreased during the treatment of antibiotics. To increase the performance of 3D-BERs, the function of microorganisms should be investigated in future studies.     

Effectiveness of Natural Compounds on DNA Damage in <Emphasis Type="Italic">Coris julis</Emphasis> (Linneaus 1758) from a Polluted Marine Area

The evaluation of DNA damage in aquatic organisms represents one of the most widely used biomarkers in the assessment and monitoring of marine pollution. Our previous research highlighted the presence of DNA damage in hepatic nuclei and blood cells of Coris julis specimens collected from Augusta harbor (Syracuse, Italy), a site highly polluted. In this work, we investigated on the ability of different natural compounds with antioxidant and immunostimulating properties, such as resveratrol (50 μM, 100 μM), amygdalin (100 μM, 200 μM), and Urtica dioica roots extract (50 and/or 100 μg/ml), in reducing DNA damage of C. julis. Blood cells were analyzed by atypical cellular comet assay. The results confirmed that Augusta specimens are the most damaged and showed that resveratrol, followed by amygdalin and U. dioica roots extract, drastically reduced DNA damage. This finding evidences the effectiveness of three natural compounds for DNA protection suggesting the possible use of feed enriched with antioxidant compounds in aquaculture practices for organisms damaged by natural and anthropic insults.     

Photocatalytic Removal of the Antibiotic Cefotaxime on TiO<Subscript>2</Subscript> and ZnO Suspensions Under Simulated Sunlight Radiation

This study presents the main results about the removal of the antibiotic cefotaxime (CTX) under simulated sunlight radiation using heterogeneous photocatalysis with titanium dioxide (TiO₂) and zinc oxide (ZnO) in aqueous solutions. The effects of pH and catalyst initial load on pollutant removal were assessed considering the response surface methodology and a central composite circumscribed experimental design, which allowed to determine the optimized conditions that lead to a higher substrate elimination. Experimental results indicated that evaluated parameters have a significant effect on antibiotic removal in both TiO₂ and ZnO suspensions. In addition, the role of photogenerated holes, hydroxyl, and superoxide anion radicals on CTX degradation was evaluated to clarify the reaction mechanism. Finally, analysis of the dissolved organic carbon content in solutions and the antibacterial activity of treated samples showed that photocatalytic treatments were able to reduce a considerable portion of the organic matter present in the systems and its antimicrobial activity.     

Improving Estimates of Fried’s Index from Mating Competitiveness Experiments

Sterile insect technique (SIT) and incompatible insect technique (IIT) are current methods for biological control of insect populations. Critical to the successful implementation of these biocontrol programs is quantifying the competitiveness of sterile/incompatible male insects for female mates relative to wildtype males. Traditionally, entomologists measure this mating competitiveness through a quantity known as Fried’s Index. We establish that Fried’s Index is mathematically equivalent to the mating competitiveness coefficient that features in many population models used in SIT/IIT programs. Using this insight, we propose a new approach for estimating Fried’s Index from mating competitiveness experiments. We show that this approach offers greater precision and accuracy than the traditional approach that is currently used in many studies. This is demonstrated using both simulation experiments and by analysing real experimental data. To facilitate uptake of the proposed method, we also provide an R package that can be used to easily analyse data from mating competitiveness experiments.     

Present status of genetics of rust resistance in flax

Summary Present knowledge of host genes conferring resistance to rust in flax and their genetics are reviewed. There are at least 34 genes conferring resistance to rust occurring in seven groups, namely, K, L, M, N, P, D and Q. Expression of these host genes is affected by temperature, genetic background and by the inhibitor gene present in certain rust strains. Recombination analysis indicates that genes within each of the M and N groups are probably closely linked and that of the L group are genetically complex. When testcross progeny between two genes of the L group were screened, susceptible and modified recombinants were recovered. Some of these susceptible recombinants yielded rare resistant revertants in their progeny. Mechanism of such reversion is not defined but appears to follow a definite pattern. It is also indicated that some of the recombinants represent new specificity. A molecular approach of cloning host genes in flax is described.     

Genetic variability in cultivated common bean beyond the two major gene pools

It is generally accepted that two major gene pools exist in cultivatedcommon bean (Phaseolus vulgaris L.), a MiddleAmerican and an Andean one. Some evidence, based on unique phaseolin morphotypesand AFLP analysis, suggests that at least one more gene pool exists incultivated common bean. To investigate this hypothesis, 1072 accessions from acommon bean core collection from the primary centres of origin, held at CIAT,were investigated. Various agronomic and morphological attributes (14categorical and 11 quantitative) were measured. Multivariate analyses,consisting of homogeneity analysis and clustering for categorical data,clustering and ordination techniques for quantitative data and nonlinearprincipal component analysis for mixed data, were undertaken. The results ofmost analyses supported the existence of the two major gene pools. However, theanalysis of categorical data of protein types showed an additional minor genepool. The minor gene pool is designated North Andean and includes phaseolintypes CH, S and T; lectin types 312, Pr, B and K; and mostly A5, A6 and A4 types-amylase inhibitor. Analysis of the combined categorical data ofprotein types and some plant categorical data also suggested that some othergermplasm with C type phaseolin are distinguished from the major gene pools.     

Data analysis for molecular characterization of plant genetic resources

Characterizations of plant genetic resources based on molecular markers have been increased in the last years. Studies using a broad range of markers applied on hundreds of plant species are the theoretical basis for inferring genetic diversity to propose both breeding and conservation strategies. Despite increased importance of molecular characterization in plant genetic resources, there is scarce information about analysis of this type of data. To fill this gap of information, this review discuss the rationale behind analyses achieved to study genetic relationship among accessions (within and between groups) and to identify accession, and also discuss the adequacy of some analyses and/or parameters for specific purposes. Genetic diversity within groups may be either quantified for the whole group (parameters to choose will depend on type of marker), or quantified and visualized for the relationships among individuals. Quantification parameters will be chosen depending on type of marker, reproduction mode and relatedness of individuals. Visualization is achieved by hierarchical and non-hierarchical methods. Genetic diversity between groups should be quantified either by analysis of molecular variance, or Nei’s parameters, or Wright’s F-statistics. Efficiency of accession identification can be evaluated by maximal probability of identical match by chance and number of resolved genotypes.     

Differential resistance of switchgrass <Emphasis Type="Italic">Panicum virgatum</Emphasis> L. lines to fall armyworms <Emphasis Type="Italic">Spodoptera frugiperda</Emphasis> (J. E. Smith)

Six cultivars of switchgrass Panicum virgatum L., a plant native to North America that has potential as a bioenergy source, were evaluated for resistance to feeding by the fall armyworm Spodoptera frugiperda (J. E. Smith). Although no mortality was noted, seedlings of the cultivar ‘Trailblazer’ and older plants of the cultivar ‘Blackwell’ were among the most resistant to feeding by S. frugiperda. Some field-collected samples from natural habitat were fed upon by S. frugiperda as readily as were the cultivars, while others caused high mortality after 2 days. Enzyme assays indicated relative differences in expression of two peroxidases thought to be involved in insect resistance in maize, but not in two chitinolytic enzymes. Genomic searches based on maize-sequence templates for the aforementioned genes identified homologs in switchgrass. Sequencing of cDNA coding for these genes identified some differences, especially in the cationic peroxidase, which could influence relative activity. These results indicate switchgrass germplasm has varying resistance to fall armyworms which could be a function of gene sequence diversity, as well as of variation in gene expression due to differences in ploidy levels or other factors.