The alternative breeding approaches for improving yield gains and stress response in pigeonpea (Cajanus cajan)

Pigeonpea is an important food legume crop of semi‐arid tropical regions. Plateauing of pigeonpea yield has been worrying breeders for the past 6–7 decades. Serious breeding efforts made during this period resulted in various high‐yielding and disease resistant cultivars. However, the gains in pigeonpea productivity have been modest. The authors, while reviewing this situation, conclude that long generation turnover, complexity of biological traits, low selection response and overreliance upon pedigree breeding present the key bottlenecks for this situation. In this paper, some alternative breeding approaches and technologies are suggested for the genetic enhancement of yield stability and stress response of pigeonpea.     

The inheritance of chemical phenotype in <Emphasis Type="Italic">Cannabis sativa</Emphasis> L. (III): variation in cannabichromene proportion

The mechanism that controls the proportion of cannabichromene (CBC), a potential pharmaceutical, in the cannabinoid fraction of Cannabis sativa L. is explored. As with tetrahydrocannabinol (THC) and cannabidiol (CBD), CBC is an enzymatic conversion product of the precursor cannabigerol (CBG). CBC is reported to dominate the cannabinoid fraction of juveniles and to decline with maturation. This ontogeny was confirmed in inbred lines with different mature chemotypes. A consistent CBC presence was found in early leaves from a diverse clone collection, suggesting that CBC synthase is encoded by a fixed locus. Morphological variants possessing a ‘prolonged juvenile chemotype’ (PJC), a substantial proportion of CBC persisting up to maturity, are presented. PJC is associated with a reduced presence of floral bracts, bracteoles, and capitate-stalked trichomes. Genetic factors causing these features were independent of the allelic chemotype locus B that was previously postulated and regulates THC and CBD synthesis and CBG accumulation. In contrast to previously described Cannabis chemotypes, the cannabinoid composition of PJCs showed plasticity in that reduced light levels increased the CBC proportion. The ability of PJC plants to enable the production of pharmaceutical raw material with high CBC purity is demonstrated.     

Utility of pearl millet landraces in breeding dual-purpose hybrids for arid zone environments of India

In pearl millet (Pennisetum glaucum (L.) R. Br.), single cross hybrids based largely on exotic germplasm, have found very limited adoption in drought-prone arid regions mainly due to their inadequate adaptation to prevalent extremely harsh agro-climatic conditions. This study tested the hypothesis that the use of restorer parents derived from adapted landrace germplasm could be an alternative strategy in developing suitable hybrids for arid regions. Forty inbred restorer lines developed from two phenotypically diverse landraces were used to develop hybrids evaluated in this study for their performance in five typical arid zone environments between 2003 and 2007. Inbred lines from both landrace populations differed significantly in their combining ability for biomass, harvest index and grain and stover yields. A larger proportion of experimental hybrids, based on selected inbred lines, significantly outperformed the commercial checks for grain and stover yields. Increase in grain and stover yields was achieved primarily due to their higher biomass productivity, with no decline in harvest index. Choice of landrace determined the relative grain and stover productivity of their hybrids. Phenotypic differences observed in parental landraces in tillering and panicle length were also visible in their respective hybrids, indicating that characteristics of landrace parental populations were transmitted in their hybrids.     

Specific adaptation of barley varieties in different locations in Ethiopia

Barley is one of the most important cereal crops grown for the livelihoods of the poor farmers of Tigray region in northern Ethiopia. As many low input and marginal environments it has benefited less from the yield increases achieved by modern breeding. This has been largely attributed due to genotype × environment intraction (GEI). To investigate the causes of GEI, ten barley varieties including local checks (two farmers developed varieties, four modern varieties and three rare local varieties) were tested over 21 environments. Participatory methods were applied to sample an adequate number of environments spanning the regional diversity. The yielding ability and stability of the varieties was graphically depicted by GGE and PLSR biplot. There were two major groups of environments, the central and northern highlands, the latter with less rainfall and poorer soils. Rainfall per month and total nitrogen level were the environmental variables that differentiated these two groups. In Tigray, rainfall in June and July were negatively correlated with yield, reflecting waterlogging problems. The different varieties were either specifically or widely adapted across the two environments. The variety ‘Himblil’, originating in Tigray, was the highest yielding and also most stable in the region of origin. However, it was inferior to improved varieties (Shege and Dimtu) at high yield levels. The association of earliness with grain yield indicates that the trait can be effectively manipulated within the existing materials. We recommend breeding for drought/water logging resistance based on selection in the target environment as the best strategy to provide stable and high yielding varieties for Tigray.     

Wild relatives of sorghum as sources of resistance to sorghum shoot fly, Atherigona soccata

The levels of resistance to shoot fly, Atherigona soccata in sorghum germplasm are low to moderate and therefore, we evaluated 17 wild relatives of sorghum under field and greenhouse conditions as an alternate source of genes for resistance to this pest. Thirty-two accessions belonging to Parasorghum , Stiposorghum and Heterosorghum did not suffer any shoot fly damage under multi-choice conditions in the field, while one accession each of Heterosorghum ( Sorghum laxiflorum ) and Chaetosorghum ( S. macrospermum ) suffered very low shoot fly damage. Accessions belonging to S. exstans (TRC 243601), S. stipoideum (TRC 243399) and S. matarankense (TRC 243576) showed absolute non-preference for oviposition under no-choice conditions. Accessions belonging to Heterosorghum , Parasorghum and Stiposorghum were preferred for oviposition, but suffered low deadheart formation. Manual infestation of seedlings with shoot fly eggs did not result in deadheart formation in some of the accessions belonging to S. exstans (TRC 243601), S. stipoideum (TRC 243399), S. matarankense (TRC 243576) and S. purpureosericeum (IS 18944). Larval mortality was recorded in main stems of the Parasorghums . Within section Sorghum , accessions belonging to S. bicolor ssp. verticilliflorum were highly susceptible to shoot fly, as were those of S. halepense . However, a few accessions such as IS 18226 (race arundinaceum ) and IS 14212 ( S. halepense ) resulted in reduced survival and fecundity. Wild relatives of sorghum exhibited very high levels of antibiosis to A. soccata , while only low levels of antibiosis have been observed in the cultivated germplasm. Therefore, wild relatives with different mechanisms of resistance can be used as a source of alternate genes to increase the levels and diversify the basis of resistance to shoot fly, A. soccata .     

Estimation,interrelationships and repeatability of genetic variability parameters in spring safflower using multi-environment trial data

The present investigation was carried out to estimate the interrelationships and repeatabilities of various variability parameters, i.e., genotypic (σ²g) and phenotypic (σ²p) variances, genotypic (GCV) and phenotypic (PCV) coefficients of variation, broad-sense heritability (h_b²), genetic advance (GA), and genetic gain (GG), using data derived from a number of plant characters [seed yield (SY), days to heading (DH) and maturity (DM), plant height (PH), and thousand kernel weight (TKW)] of 17 spring safflower genotypes grown in 27 environments in Iran during 2003–2005. The analysis of variance for the five characters revealed significant differences among the genotypes in most of the environments, indicating a very high variability within the genotype. High genotypic and phenotypic variances in the quantitative traits, particularly for SY, were markers of increased success. A close correlation between GCV and PCV was observed for all the traits, indicating that all of the characters were less influenced by the environment and that the variability which exists in these characters is under genetic influence; however, the relatively higher values of PCV indicate the predominant role of environment. High expected genetic advances were observed for SY, but this trait showed large fluctuations in different environments (97.4%). High and low mean values of heritability were observed for DH (74.3%) and SY (59.7%), respectively, whereas high and low mean values of genetic gain were found for SY (60.3%) and DM (4.2%), respectively. High heritability coupled with low GA as a percentage of the mean was observed for DH and MD, whereas moderate heritability with moderate GA as a percentage of the mean was exhibited for SY. Analysis of correlation among the parameters showed that they were strongly and constantly correlated with each other, but none of them were consistently well correlated with the heritability parameter (h_b²). Based on estimates of the genetic variability parameters within each trial, the ranking of genotypes in the low-performance subset for all traits differed from that in the high-performance subset. This result indicates poor repeatability for the genetic variability parameters. The estimates of the parameters in the multi-year trials were almost constant and repeatable, whereas the responses over years showed poor repeatability.     

Genetic stability at nuclear and plastid DNA level in regenerated plants of <Emphasis Type="Italic">Solanum</Emphasis> species and hybrids

In this work we detected the extent of variability at nuclear and cytoplasmic DNA level of regenerated plants belonging to Solanum genotypes with a different genetic background and somatic chromosome number. As for the nuclear characterization, a total of 66 (18.5%) polymorphic bands were scored using 13 ISSR primers on 45 randomly selected regenerants. Our results show that the regenerants obtained from clone cmm 1T and, at lower level, those from cph 1C are unstable under in vitro conditions or rather more prone to in vitro-induced stress leading to somaclonal variation than the other genotypes used. Two types of changes were observed: disappearance of parental ISSR fragments, termed “loss”; appearance of novel ISSR fragments, termed “gain”. The most frequent event occurring in the regenerants was the loss of fragments (41 bands). Regenerated plants were analyzed with seven plastid universal primers to determine the cytoplasmic composition at chloroplast level. All cpDNA primer pairs tested produced amplicons of the same size in all genotypes analyzed and no polymorphic fragments were observed with any universal primers used. Our results show that under in vitro culture conditions genotype affects the integrity of the genome. In addition, the absence of polymorphism at plastid level confirms the greater genetic stability of cytoplasmic DNA.     

A systematic and quantitative approach to improve water use efficiency in agriculture

As the competition for the finite water resources on earth increases due to growth in population and affluence, agriculture is faced with intensifying pressure to improve the efficiency of water used for food production. The causes for the relatively low water use efficiency in agriculture are numerous and complex, including environmental, biological, engineering, management, social, and economic facets. The complexity of the problem, with its myriads of local variations, requires a comprehensive conceptual framework of the underlying physical and biological processes as the basis to analyze the existing situation and quantify the efficiencies, and to plan and execute improvements. This paper proposes such a framework, based on the simple fact that the overall efficiency of any process consisting of a chain of sequential step is the product of the efficiency (i.e., output/input ratio) of its individual component steps. In most cases of water use, a number of process chains, both branching and merging, are involved. Means to integrate the diverging and converging chains are developed and presented as equations. Upscaling from fields to regions and beyond are discussed. This chain of efficiencies approach is general and can be applied to any process composed of chains of sequential steps. Here the framework is used to analyze the systems of irrigated and dryland crop production, and animal production on rangeland. Range of plausible efficiencies of each step is presented as tables, with values separately for the poor and for the good situation of circumstances, management and technology. Causes of the differences in efficiency of each step, going from water delivery to soil water extraction, transpiration, photosynthesis, and conversion to crop biomass and yield, and to animal product are briefly discussed. Sample calculations are made to demonstrate how modest differences in the efficiencies of the component steps are manifested as large to huge differences in the overall efficiency. Based on an equation quantifying the impact of changes in efficiency of component steps on the overall efficiency, it is concluded that generally, it is more effective to made modest improvements in several or more steps than to concentrate efforts to improve one or two steps. Hence, improvement efforts should be systematic and not overly concentrated on one or two components. The potential use of the same equation as the point of departure to optimize the allocation of economic resource among the component steps to maximize the improvement in the overall water use efficiency is elaborated on. The chain of efficiencies framework provides the means to examine the current levels of efficiency along the pathways of agricultural water use, to analyze where inefficiencies lie by comparing with the range of known efficiency values in the tables presented, to assess the potential improvements that may be achieved in various parts and their impact on the overall efficiency, and to aid in the optimal allocation of resources for improvements.

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Genes Lr48 and Lr49 for hypersensitive adult plant leaf rust resistance in wheat (Triticum aestivum L.)

The genetic bases of leaf rust resistance in wheat (Triticum aestivum L.) line CSP44, selected from the Australian cultivar Condor, and Indian cultivar VL404, were studied. The reaction patterns of CSP44 and VL404 against Indian races 12, 77, 77-1, 77-2, 77-3, 77-4, 77-5 and 108 were different from reaction patterns shown by near-isogenic lines with known adult plant resistance (APR) genes, viz. Lr12, Lr13, Lr22b and Lr34. Although the reaction patterns of CSP44 and VL404 were similar to the near-isogenic line Tc+Lr22a, tests of allelism indicated absence of Lr22a in both CSP44 and VL404. On the basis of genetic studies, their resistances in field tests against race 77-5, the most virulent race from the Indian sub-continent, were each ascribed to two genes. One of the two genes in each wheat was identified to be the non-hypersensitive APR gene Lr34. The second APR genes in CSP44 and VL404 gave hypersensitive reaction types and were recessive and dominant, respectively. The gene in CSP44 was designated Lr48and the gene in VL404, Lr49. This revised version was published online in August 2006 with corrections to the Cover Date.