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991.
992.
Ryo Kubota Mark A. Schell Gabriel D. Peckham Joanne Rue Anne M. Alvarez Caitilyn Allen Daniel M. Jenkins 《Journal of General Plant Pathology》2011,77(3):182-193
New rapid diagnostic methods are urgently needed to discriminate the quarantine pathogen Ralstonia solanacearum (Rs) race 3 biovar 2 (R3B2) from other populations of Rs that lack the adaptation to cause bacterial wilt disease in temperate
regions. We used an in silico bioinformatic approach to identify several genome sequences potentially specific to R3B2 strains. Primer sets were designed
to PCR-amplify sequences in these regions, and four sets were ultimately shown to be >99% accurate for detection of R3B2 strains.
On the basis of these results, several primers were designed to enable development of a loop-mediated isothermal amplification
assay that was rapid, technologically simple, and essentially 100% accurate for identification of R3B2 when applied to a comprehensive
collection of geographically diverse Rs strains. We fortuitously found that a sequence in one of the “R3B2-specific” regions
has ~90% identity to a sequence present in strains of the blood disease bacterium (BDB), a member of the Rs species complex
that infects banana. Alignments of these sequences allowed design of a second PCR primer set that proved 100% accurate for
identification of BDB strains when tested on the 22 BDB strains available to us. These results demonstrate the power of in silico genomic subtraction for rapid identification of population-specific DNA sequences and for the development of simple, reliable
detection methods for Rs subpopulations. 相似文献
993.
Syed Jawad Ahmad Shah Shaukat Hussain Musharaf Ahmad Farhatullah Iftikhar Ali Muhammad Ibrahim 《Journal of General Plant Pathology》2011,77(3):174-177
Fifty wheat varieties along with Jupateco-73 and Morocco were studied for the expression of leaf tip necrosis (LTN), a trait
linked with the durable rust resistance gene pair Lr34/Yr18. LTN was frequent (i.e., ≥6) in nine replications of a field experiment over 3 years in 17 genotypes, and the varieties were
considered positive for LTN. In molecular analyses of these varieties, having relative severity values up to 78 for yellow
rust and 45 for leaf rust, the 150-bp Lr34/Yr18-linked allele was consistently amplified. Expression of LTN in six of nine replications is an appropriate threshold for predicting
the presence of Lr34/Yr18 gene pair, and genotypes can be selected using this trait. 相似文献
994.
Jun Ohnishi Toshio Kitamura Fumihiro Terami Ken-ichiro Honda 《Journal of General Plant Pathology》2011,77(1):54-59
The ability of the whitefly Bemisia tabaci to transmit two strains of Tomato yellow leaf curl virus, the Israel and Mild strains, was studied after serial transfers of individual whiteflies that were viruliferous for both
strains to tomato plants. After single whiteflies had successive acquisition feedings first on a single plant infected with
one strain and then on a plant infected with the other strain, the single whiteflies later transmitted intermittently one,
the other, or both strains to the test plants during serial transfers at 1-day intervals. Because both strains were found
in the head, abdomen, and legs dissected from whiteflies during the retention period after the two successive acquisition
feedings, both strains apparently circulate from midgut cells to salivary glands through the hemolymph. 相似文献
995.
Shinpei Banno Hidenari Saito Hiroshi Sakai Toshihiko Urushibara Kentaro Ikeda Takeshi Kabe Isao Kemmochi Makoto Fujimura 《Journal of General Plant Pathology》2011,77(5):282-291
Verticillium longisporum and V. dahliae, causal agents of Verticillium wilt, are spreading through the cabbage fields of Gunma Prefecture. Using the V. longisporum-specific intron within the 18S rDNA and differences between ITS 5.8S rDNA sequences in Japanese isolates of V. longisporum and V. dahliae, we developed three quantitative nested real-time (QNRT) PCR assays. The QNRT-PCR quantification of V. longisporum or V. dahliae in cabbage field soil was consistent with the severity of Verticillium wilt disease in those fields. In field trials of resistant
cultivar YR Ranpo grown for three seasons in soil infested with the pathogen, disease severity and pathogen density in the
soil were significantly reduced in a field moderately contaminated by V. dahliae, but only slightly reduced in a highly contaminated field. These results suggest that continuous cultivation of a resistant
cultivar is an effective way to reduce the pathogen population. QNRT-PCR assays provide a powerful analytical tool to evaluate
the soil population dynamics of V. longisporum and V. dahliae for disease management. 相似文献
996.
Here Fusarium oxysporum was killed in exudates obtained from soil biologically disinfested with ethanol, indicating that physical interaction with
soil microorganisms was not essential. Because acetic acid was confirmed to accumulated during the treatment, we evaluated
the effect of acetic acid amendment against the pathogen in plastic containers. A drop in the soil redox potential seemed
to be correlated with the fungicidal efficacy of acetic acid. Under reductive soil conditions, metal ions such as Mn2+ and Fe2+ formed, and the pathogen was effectively suppressed in Mn2+ and Fe2+ solution. Therefore, Fe2+ and Mn2+ may be the agents that induce suppression of the pathogen during biological soil disinfestation. 相似文献
997.
Antonio Evidente Rossitza Rodeva Anna Andolfi Zornitsa Stoyanova Carmen Perrone Andrea Motta 《European journal of plant pathology / European Foundation for Plant Pathology》2011,130(2):173-182
Recently, a new fungal disease caused by Diaporthe angelicae (anamorph Phomopsis foeniculi) has been found with increasingly frequency on fennel (Foeniculum vulgare) in Bulgaria. Using a bioassay-guided isolation and purification procedure, different metabolites were isolated from the
fungal culture filtrates. They were identified by spectroscopic methods as nectriapyrone, a pentaketide monoterpenoid, and
altersolanols A and J and macrosporin, three octaketides anthracenones. Leaf puncture bioassay was applied on detached tomato
leaves to prove the phytotoxic activity of the fractions and of pure compounds. Nectriapyrone and altersolanols A and J showed
a modulated phytotoxicity, while macrosporin was not toxic. Altersolanol A was the most active compound. 相似文献
998.
Abu Shamim Mohammad Nahiyan Louisa Robinson Boyer Peter Jeffries Yoh-ichi Matsubara 《European journal of plant pathology / European Foundation for Plant Pathology》2011,130(2):197-203
The diversity of Fusarium populations in asparagus (Asparagus officinalis L.) decline fields in Japan was estimated by PCR-SSCP (single-stranded conformational polymorphism) analysis of the ITS2
regions of the nuclear rRNA genes. This method was used to rapidly and objectively identify pathogens associated with roots
of plants showing symptoms of asparagus decline collected from fields in five regions across Japan. Over 651 fusarial isolates
were obtained, and were easily differentiated into three principal species. Fusarium oxysporum f. sp. asparagi was most frequently isolated from the domestic five regions (68%), whereas Fusarium proliferatum (28.6%) was less frequent. Fusarium solani was found much rarely (2.5%). The frequency of isolation of Fusarium proliferatum increased gradually from the north to the south of Japan, though considerable differences were found between fields in each
region, as well as regional differences among the Fusarium populations. Most of the fusarial isolates were highly pathogenic in vitro. These results reveal that Fusarium oxysporum f. sp. asparagi and Fusarium proliferatum are important biotic factors which lead to asparagus decline in Japan. 相似文献
999.
Avia E. Rubin Ayelet-Chen Werdiger Mathias Blum Ulrich Gisi Helge Sierotzki Dietrich Hermann Yigal Cohen 《European journal of plant pathology / European Foundation for Plant Pathology》2011,129(2):339-351
Wild type (WT) field isolates of Bremia lactucae failed to germinate in vitro or infect lettuce leaves in the presence of CAA (carboxylic acid amide) fungicides. Minimal
inhibitory concentrations (MIC) for mandipropamid, dimethomorph, benthiavalicarb and iprovalicarb were 0.005, 0.5, 0.5 and
5 μg ml−1, respectively. Mutagenesis experiments showed that spores exposed to EMS (ethyl methane sulphonate) or UV irradiation (254 nm)
could infect lettuce leaves in the presence of up to 100 μg ml−1 CAA. The proportion of infected leaves relative to the number of spores inoculated (infection frequency) was inversely related
to the concentration of CAA used, ranging between 0 and 160 per 1 × 106 spores. Resistant mutants (RM) lost their resistance within 1–14 reproduction cycles on CAA-treated plants. Crosses were
made between RMxWT isolates and RMxRM isolates with an attempt to obtain stable homozygous resistant off-springs. Such crosses
yielded few resistant but unstable progeny isolates. Mutagenic treatments given to hybrid isolates also failed to produce
stable resistance. Previous gene sequencing data showed that stable resistance to CAAs is based on a single SNP in the cellulose synthase 3 (CesA3) gene of Plasmopara viticola. Therefore, we sequenced a 582 bp DNA fragment of Ces3A of WT, RM and hybrid isolates of B.lactucae. No mutation in this gene fragment was found. We conclude that mutagenic agents like EMS or UV may induce resistance to CAA
in Bremia lactucae but this resistance is not stable and not linked to mutations in CesA3 gene. 相似文献
1000.
Yan-Xiang Qi Xin Zhang Jin-Ji Pu Xiao-Mei Liu Ying Lu He Zhang Hui-Qiang Zhang Yan-Chao Lv Yi-Xian Xie 《European journal of plant pathology / European Foundation for Plant Pathology》2011,130(1):83-95
Twenty-two isolates of Corynespora cassiicola obtained from cucumber, papaya, eggplant, tomato, bean, Vigna, sesame and Hevea rubber (Hevea brasiliensis) were analysed by morphological features, the differences of the ribosomal DNA internal transcribed spacer (rDNA-ITS) region
sequence and the inter simple sequence repeat (ISSR) technique. Variability of morphological features was observed among the
isolates. Pathogenicity tests showed that isolates from different hosts attacked Hevea rubber. Sequences of two outgroup taxa, C. proliferata and C. citricola, were downloaded from GenBank. The phylogenetic trees were constructed by using the rDNA-ITS region sequences from 24 Corynespora
spp. isolates. In this analysis, the 24 sequences grouped into two clusters (A and B). Cluster A consists of sequences from
all isolates of C. cassiicola; whereas cluster B consists of the two outgroup taxa, C. proliferata and C. citricola. However, the ITS region is conservative, and is not fit for studying differences among isolates. A total of 114 DNA fragments
was amplified with 16 ISSR primers, among which 102 were polymorphic (89.5%). A dendrogram was created by the unweighted pair-group
method with arithmetic averaging (UPGMA) analysis, and 22 isolates grouped into three clusters (C, D and E). Cluster C is
composed of all of the Hevea rubber isolates, whereas cluster D is composed of nine isolates: four from papaya, five from cucumber, eggplant, bean, vigna
and sesame. Cluster E is composed of two isolates from cucumber and tomato. These analyses showed that the genetic diversity
was very rich among the tested isolates. There are no correlations between the morphological characteristics or rDNA-ITS region
sequences of the 22 isolates and their host or geographical origin, but there is a link between ISSR clusters and their host
origins. ISSR markers appear to be useful for intra-species population study in C. cassiicola. 相似文献