Soil Organic Matter/Carbon Dynamics in Contrasting Tillage and Land Management Systems: A Case for Smallholder Farmers with Degraded and Marginal Soils

This study reveals that soil organic matter (SOM) is 58% soil organic carbon (SOC) and the processes that govern SOM dynamics include those that promote SOM synthesis from organic inputs and those that decrease SOM through decomposition. Land use is a key determinant of SOC dynamics and spatial differences in SOM. Agricultural soils can accommodate extra carbon (C) between 140 and 170 Pg C. Globally sub soils store more than half of total SOC. The SOM can increase under no-tillage management even with low crop residue input. Soil tillage induces loss of carbon in macroaggregates (>250 μm) and a gain of carbon in microaggregates (<250 μm). The stage of plant development rather than plant species determines carbon dynamics from plants to soil, and the rate depends on the plant development. However, sorption of dissolved organic matter to mineral soil influences the stabilization of dissolved organic matter.     

Marine myxobacteria as a source of antibiotics--comparison of physiology, polyketide-type genes and antibiotic production of three new isolates of Enhygromyxa salina

Three myxobacterial strains, designated SWB004, SWB005 and SWB006, were obtained from beach sand samples from the Pacific Ocean and the North Sea. The strains were cultivated in salt water containing media and subjected to studies to determine their taxonomic status, the presence of genes for the biosynthesis of polyketides and antibiotic production. 16S rDNA sequence analysis revealed the type strain Enhygromyxa salina SHK-1(T) as their closest homolog, displaying between 98% (SWB005) and 99% (SWB004 and SWB006) sequence similarity. All isolates were rod-shaped cells showing gliding motility and fruiting body formation as is known for myxobacteria. They required NaCl for growth, with an optimum concentration of around 2% [w/v]. The G + C-content of genomic DNA ranged from 63.0 to 67.3 mol%. Further, the strains were analyzed for their potential to produce polyketide-type structures. PCR amplified ketosynthase-like gene fragments from all three isolates enhances the assumption that these bacteria produce polyketides. SWB005 was shown to produce metabolites with prominent antibacterial activity, including activity towards methicillin resistant Staphylococcus aureus (MRSA) and Staphylococcus epidermidis (MRSE).     

Fungal disease suppression by inorganic salts: A review

This paper reviews the scientific literature on the topic of fungal disease suppression by applications of inorganic salts as alternatives to synthetic fungicides on a global scale for both protected and field crops. Where data were available, the comparative efficacy of inorganic salts with conventional fungicide products is discussed. In total, published evidence was found for 34 inorganic salts (mainly bicarbonates, phosphates, silicates, chlorides and phosphites) that were able to reduce the severity of 49 fungal diseases (of the foliage, stem, fruit, tuber, root and post-harvest) in 35 plant species (vegetables, cereals, fruit crops, root/tuber crops, ornamentals and native plants). The most studied and best controlled disease with inorganic salts was powdery mildew of cucurbits [Sphaerotheca fuliginea (Schltdl.) Pollacci 1913 or Erysiphe cichoracearum DC. 1805; up to 99% efficacy], wheat [Blumeria graminis (DC.) Speer 1975 (f. sp. tritici)] and grapes [Uncinula necator (Schwein.) Burrill 1892]. The next best evidence for disease control was for wheat septoria blotch (Septoria tritici Berk. & M.A. Curtis 1874), rice blast [Magnaporthe grisea (T.T. Hebert) M.E. Barr 1977], potato late blight [Phytophthora infestans (Mont.) de Bary 1876] and several other Phytophthora spp. The published evidence suggests that these 34 inorganic salts are generally less effective than conventional fungicides and could not fully replace them. However, their integration in a disease management strategy may enable a reduction in the number of conventional fungicide applications required. The potential for the inclusion of inorganic salts in fungal disease management programmes merits further investigation and greater regulatory innovation in the near future.     

The effect of simulated rat damage on irrigated rice yield and compensation

A field experiment was conducted to investigate the impact of simulated rat damage on grain yield in irrigated lowland rice in An Giang province, in the Mekong Delta of Vietnam. Rat damage was simulated by making a 45° cut at the base of the rice tillers about 3–5 cm above the soil surface. 0% (control), 5%, 10%, 25% and 50% of the tillers were removed at the tillering (25 days after sowing, DAS), panicle initiation (43 DAS), flowering (72 DAS) and ripening (87 DAS) stages. The total number of mature tillers, immature tillers and percent filled grains, the weight of 1000 grains and grain yields were recorded. The rice crop completely compensated by increased tillering and yield for tillers damaged up to 50% at the tillering stage. However, the damage and yield loss were highly variable. The ability of the rice crop to compensate at later stages progressively reduced. The implications for managing rat damage to rice crops are (1) rodent control activities should be applied before 10% of tillers are damaged at the tillering stage, and (2) a well balanced nitrogen supply during the tillering stage could potentially assist the rice plants to better compensate for rat damage.     

The effect of temperature and other factors on chlorophyll a fluorescence and the lower oxygen limit in apples (Malus domestica)

The effects of temperature, scan interval and rate of oxygen (O₂) decline on pulse frequency modulation (PFM)-based minimum fluorescence (F_α) and the F_α-based lower oxygen limit (LOL) were investigated using ‘Honeycrisp’ apples (Malus × domestica Borkh). The effects of temperature and hypoxic stress on pulse amplitude modulation (PAM) fluorescence parameters were also investigated. The PFM scan interval had no effect on the F_α baseline, but increases in the scan interval decreased the low-O₂-induced fluorescence spike intensity (ΔF_α). Temperature negatively correlated with the F_α baseline while ΔF_α °C⁻¹ was greater at lower than at higher temperatures. When using a PAM fluorometer, the minimum fluorescence (F_o), and to a lesser extent the maximum fluorescence (F_m), were similarly affected by temperature as was F_α. Temperature altered the LOL in fruit. Apples stored at 20, 10, 3.5 and 0 °C spiked at 0.72, 0.33, 0.22 and 0.08 kPa O₂, respectively, under a rapid O₂ decline (i.e., 20.9 to <1 kPa O₂ in ≈5–6 h). Although the low-O₂ F_α spike apex values did not change with temperature, the spike intensity increased with temperature due to a reduced fluorescence baseline. A slower O₂ decline rate produced slightly higher LOL and lower spike intensity values. In conclusion, temperature and rate of O₂ decline affected the low-O₂-induced PFM fluorescence spike intensity as well as the LOL, while the PFM scan interval affected the spike intensity.     

Slaughter findings feedback systems--its use for farms of origin?

Over a period of 22 months 13 official meat inspection authorities examined a number of 152 520 swine at an Austrian slaughterhouse for pathologic-anatomic changes (five parameters). Of those veterinarians whose reliability in the recording of findings was a given, the results were analysed by employing a mathematical model which assessed whether the activities of 25 attending veterinarians and 223 farmers actually lead to an improvement of animal health in their livestock. Mild pneumonia was registered in 14.5% of swine; no attending veterinarians had any influence whatsoever on the occurrence of this parameter. Farmers' activities improved animal health on two farms (0.9%), six farms of origin (2.69%) showed significantly lower findings than the average of all farms. Pleurisy was ascertained in 22% of all slaughter pigs. Through measures taken, four attending veterinarians (16%) caused a reduction of incidents, two works managers (0.9%) made worse, six farmers (2.69%) improved animal health of their live stock. Seven farmers (3.14%) showed significantly (p < 0.05) higher, 28 farms (12.6%) lower prevalence. Pericarditis affected 4.5% of the animals in question. On all farms of origin the condition of health remained unchanged by measures taken by veterinarians. On two farms (0.9%) the influence exercised by farmers led to a deterioration of the health of swine, six businesses (2.69%) showed higher, one (0.45%) lower prevalence than on average. 6.2% of swine showed white spots. Attending veterinarians did not influence this parameter at all. With preventive measures taken five farms (2.24%) showed less, three farms (1.35%) higher prevalence by the end of the 22 month term. Mange concerned 2.2% of all slaughter pigs. The activities of one veterinarian (4%) caused the number of incidents to double; on six farms (2.69%) a significantly higher prevalence was registered. Whatever influence exercised, the status of health of slaughter pigs remained unchanged throughout the duration of the study.     

Signatures of adaptation to obligate biotrophy in the Hyaloperonospora arabidopsidis genome

Many oomycete and fungal plant pathogens are obligate biotrophs, which extract nutrients only from living plant tissue and cannot grow apart from their hosts. Although these pathogens cause substantial crop losses, little is known about the molecular basis or evolution of obligate biotrophy. Here, we report the genome sequence of the oomycete Hyaloperonospora arabidopsidis (Hpa), an obligate biotroph and natural pathogen of Arabidopsis thaliana. In comparison with genomes of related, hemibiotrophic Phytophthora species, the Hpa genome exhibits dramatic reductions in genes encoding (i) RXLR effectors and other secreted pathogenicity proteins, (ii) enzymes for assimilation of inorganic nitrogen and sulfur, and (iii) proteins associated with zoospore formation and motility. These attributes comprise a genomic signature of evolution toward obligate biotrophy.