A microsatellite and morphological assessment of the Russian National cultivated potato collection

The germplasm collections of the Vavilov Institute of Plant Industry, Russia represent the first germplasm collection made for potatoes, now numbering 8,680 accessions. It has tremendous historical and practical importance and a rich history, having been used to document a polyploid series in the cultivated species, to formulate initial taxonomic hypotheses in potato, for studies of interspecific hybridization, and serving as the germplasm base for Russian breeding efforts. Despite its importance and size, there has never been a study of its molecular diversity, and there were many gaps in its passport data. The purpose of the present study is to obtain morphological, ploidy, and microsatellite (SSR) data needed to set up a useful subset of the collection of cultivated potatoes and closely related wild species, and to use this collection to study cultivated potato taxonomy and phylogeny. Through assessments of viability, passport data, and chromosome counts, we selected a subset of 238 cultivated and 54 wild accessions. A morphological and nuclear SSR study of these collections distinguished only three cultivated species: Solanum curtilobum, S. juzepczukii and S. tuberosum, not the many more cultivated potato species of prior taxonomic treatments. The SSR study supports the ideas of S. acaule as one of the parental species for S. curtilobum and S. juzepczukii. The morphological and SSR results are very similar to other recent studies of cultivated species, and show the need to reclassify the collection of cultivated potatoes by modern taxonomic criteria.     

Allometric relationships of frequently used shade tree species in cacao agroforestry systems in Sulawesi, Indonesia

Shade trees play an important role within agroforestry systems by influencing radiation and wind regimes as well as nutrient and hydrological cycling. However, there is a lack of quantitative assessments of their functions. One of the reasons is the rare information on structural characteristics of shade tree species. Therefore, the aim of this study is to provide basic information on the structure of frequently used shade tree species for the implementation of models simulating the ecosystem processes in agroforestry systems. The investigation of the shade trees was conducted at two cacao agroforestry sites on Sulawesi, Indonesia. The measurements of the main structural parameters: diameter at breast height, tree height, trunk height, crown length and crown radius were carried out for the shade tree species Aleurites moluccana, Cocos nucifera and Gliricidia sepium. For data collection, the National Forest Inventory Field Manual Template by FAO (2004) was applied. Based on this information allometric functions were derived for the correspondent shade tree species. The best significant relationships were obtained for the height-crown length relationship of the dicotyledonous tree species’ A. moluccana and G. sepium with a coefficient of determination r² = 0.925 and r² = 0.738, respectively, and the height-crown length relationship of the monocotyledonous palm C. nucifera with r² = 0.663. The transferability tests ‘analysis of covariance’ and ‘homogeneity of slopes’ have shown that the obtained allometric functions are also applicable to other cacao agroforestry systems of the region.     

Opportunities for domesticating the African baobab (Adansonia digitata L.): multi-trait fruit selection

Among the priority species identified for domestication in the Sahel region of Sub-Sahara Africa is the baobab (Adansonia digitata L.) tree. The quantification of the variation in nutrient content and fruit morphological traits of trees is one of the most important steps in identifying superior planting material for domestication. Ten provenances in Mali covering all the different agro-ecological zones were selected and the fruit morphological traits, vitamin C, calcium, iron and colour were studied. Mean pulp content was 2,149 ± 1,117 , 2,406 ± 776  and 25 ± 17 mg kg^?1 for vitamin C, calcium and iron, respectively. Fruit pulp colour varied from white, creamy to pink and a significant correlation between pulp vitamin C content and reflectance in the green and blue bands was observed. Significant negative correlations were found between rainfall and pulp vitamin C content and between mean annual temperature and fruit and pulp weight and pulp fraction, suggesting that these traits are influenced by the environment. Pulp iron content correlated positively with topsoil sodicity and base saturation. Similarly, pulp vitamin C content correlated positively with topsoil sand fraction. Pulp reflectance in the blue and green bands correlated negatively with topsoil pH water and base saturation, respectively. The variation in nutritive and morphological traits offers the opportunity for selecting plus trees with a combination of desired traits for domestication.     

耕作方式对不同抛秧水稻品种立苗期根系生长的影响

对不同耕作方式2种基因型水稻的立苗期根系特性进行研究.结果表明:两优培九、金优253立苗期免耕抛秧单株根干重、单条根长、根毛区长略低于常耕抛秧,但差异不显著.免耕提高了水稻立苗后期总根数、白根数、根系活力和超氧化物歧化酶活性.立苗期超级稻两优培九的单株根生物量、总根数、一次分枝、二次分枝根数量、根系活力和超氧化物歧化酶活性均显著高于金优253.     

Recombinant bovine S100A8 and A9 enhance IL-1β secretion of interferon-gamma primed monocytes

Calgranulin A (S100A8) and B (S100A9) are found at high levels in inflamed tissue and have been associated with acute and chronic inflammatory disorders. Calgranulins are discussed as damage-associated molecular patterns (DAMPs). To analyze the role of calgranulins for inflammatory responses, bovine S100A8 and S100A9 were cloned, successfully expressed and FPLC-purified. Both molecules did not induce NF-κB activation in boTLR4-transfected HEK293 cells and stimulation of bovine monocytes with both proteins did not result in interleukin 1β (IL-1β) secretion or an upregulated mRNA expression of selected genes (IL1B, TNF, CXCL8, IL10, IL12). However, Interferon γ (IFN-γ) primed bovine monocytes released significantly higher amounts of IL-1β after stimulation with S100A8, S100A9, and co-stimulation with adenosine triphosphate (ATP). In IL-4/IL-13-primed monocytes, the IL-1β release was completely abrogated. The results imply that TLR4/MyD88/NF-κB-independent S100A8/A9-mediated activation of the inflammasome in cattle is favored in a Th1 environment and that S100A8 and S100A9 act as a DAMP in cattle.     

Regulation of Innate Immune Function in Bovine Oviduct Epithelial Cells in Culture: The Homeostatic Role of Epithelial Cells in Balancing Th1/Th2 Response

This study aimed to investigate the role of epithelial cells in regulating innate immunity in bovine oviduct epithelial cell (BOEC) culture. We studied the effect of Escherichia coli lipopolysaccharide (LPS) and its interaction with ovarian steroids, estradiol (E2) and progesterone (P4), and luteinizing hormone (LH) at concentrations observed during the preovulatory period on immune responses in BOEC culture. Immunohistochemistry of oviduct tissue showed intensive expression of Toll-like receptor-4 (TLR-4) and TLR-2 in epithelial cells. A dose of 10 ng/ml LPS stimulated TLR-4, cyclooxygenase-2 (COX-2), nuclear factor kappa B inhibitor A (NFKBIA), interleukin 1β (IL-1β) and tumor necrosis factor α (TNF-α) expression, indicating an early pro-inflammatory response. A dose of 100 ng/ml LPS did not induce expression of these genes but stimulated TLR-2, IL-10,IL-4 and microsomal prostaglandin E synthase-1 (mPGES-1) expression and PGE2 secretion, indicating an anti-inflammatory response. Ovarian steroids and LH completely block LPS (10 ng/ml)-induced TLR-4, IL-1β and TNF-α expression as well as LPS (100 ng/ml)-induced TLR-2 expression. Taken together, this study suggests the existence of an early signaling system to respond to infection in the BOEC. In addition, ovarian steroids and LH may play a critical role in inducing homeostasis and in controlling hyperactive pro-inflammatory responses detrimental to epithelial cells, sperm and the embryo.     

Pomegranate phenolics from the peels, arils, and flowers are antiatherogenic: studies in vivo in atherosclerotic apolipoprotein e-deficient (E 0) mice and in vitro in cultured macrophages and lipoproteins

We have analyzed in vivo and in vitro the antiatherogenic properties and mechanisms of action of all pomegranate fruit parts: peels (POMxl, POMxp), arils (POMa), seeds (POMo), and flowers (POMf), in comparison to whole fruit juice (PJ). Atherosclerotic E 0 mice consumed POM extracts [200 microg of gallic acid equivalents (GAE)/mouse/day] for 3 months. Blood samples, peritoneal macrophages (MPM), and aortas were then collected. All POM extracts possess antioxidative properties in vitro. After consumption of PJ, POMxl, POMxp, POMa, or POMf by E (0) mice, the atherosclerotic lesion area was significantly decreased by 44, 38, 39, 6, or 70%, respectively, as compared to placebo-treated group, while POMo had no effect. POMf consumption reduced serum lipids, and glucose levels by 18-25%. PJ, POMxl, POMxp, POMf, or POMa consumption resulted in a significant decrement, by 53, 42, 35, 27, or 13%, respectively, in MPM total peroxides content, and increased cellular paraoxonase 2 (PON2) activity, as compared to placebo-treated mice. The uptake rates of oxidized-LDL by E (0)-MPM were significantly reduced by approximately 15% after consumption of PJ, POMxl, or POMxp. Similar results were obtained on using J774A.1 macrophage cell line. Finally, pomegranate phenolics (punicalagin, punicalin, gallic acid, and ellagic acid), as well as pomegranate unique complexed sugars, could mimic the antiatherogenic effects of pomegranate extracts. We conclude that attenuation of atherosclerosis development by some of the POM extracts and, in particular, POMf, could be related to the combined beneficial effects on serum lipids levels and on macrophage atherogenic properties.     

Rapid detection of tetracyclines and their 4-epimer derivatives from poultry meat with bioluminescent biosensor bacteria

Tetracycline (TC) specific luminescent bacterial biosensors were used in a rapid TC residue assay sensitized to meet the EU maximum residue limit (MRL) for TC residues in poultry muscle tissue (100 microg kg(-1)) by membrane-permeabilizing and chelating agents polymyxin B and EDTA. Sensitivities of 5 ng g(-1) for doxycycline, 7.5 ng g(-1) for chlortetracycline, and 25 ng g(-1) for tetracycline and oxytetracycline were reached. Except for doxycycline, the MRLs of these tetracyclines include their 4-epimer metabolites. In the biosensor assay, all four 4-epimers showed induction capacity and antimicrobial activity, and antimicrobial activity was also observed in the inhibition assay, although with lower efficiency than that of the corresponding parent compound in both assays. The biosensor assay is an inexpensive and rapid high-throughput screening method for the detection of 4-epimer TC residues along with their parent compounds.