Two new tryptamine derivatives, leptoclinidamide and (-)-leptoclinidamine B, from an Indonesian ascidian Leptoclinides dubius

Two new tryptamine-derived alkaloids, named as leptoclinidamide (1) and (-)-leptoclinidamine B (2), were isolated from an Indonesian ascidian Leptoclinides dubius together with C2-α-D-mannosylpyranosyl-L-tryptophan (3). The structure of 1 was assigned on the basis of spectroscopic data for 1 and its N-acetyl derivative (4). Compound 1 was an amide of tryptamine with two β-alanine units. Although the planar structure of 2 is identical to that of the known compound (+)-leptoclinidamine B (5), compound 2 was determined to be the enantiomer of 5 based on amino acid analysis using HPLC methods. Compounds 1 to 4 were evaluated for cytotoxicity against two human cancer cell lines, HCT-15 (colon) and Jurkat (T-cell lymphoma) cells, but none of the compounds showed activity.     

Anti-Mycobacterial Nucleoside Antibiotics from a Marine-Derived Streptomyces sp. TPU1236A

Five new nucleoside antibiotics, named streptcytosines A–E (1–5), and six known compounds, de-amosaminyl-cytosamine (6), plicacetin (7), bamicetin (8), amicetin (9), collismycin B (10), and SF2738 C (11), were isolated from a culture broth of Streptomyces sp. TPU1236A collected in Okinawa, Japan. The structures of new compounds were elucidated on the basis of their spectroscopic data (HRFABMS, IR, UV, and 2D NMR experiments including ¹H-¹H COSY, HMQC, HMBC, and NOESY spectra). Streptcytosine A (1) belonged to the amicetin group antibiotics, and streptcytosines B–E (2–5) were derivatives of de-amosaminyl-cytosamine (6), 2,3,6-trideoxyglucopyranosyl cytosine. Compound 1 inhibited the growth of Mycobacterium smegmatis (MIC = 32 µg/mL), while compounds 2–5 were not active at 50 µg/disc. Bamicetin (8) and amicetin (9) showed the MICs of 16 and 8 µg/mL, respectively.     

Melatonin Supplementation During In Vitro Maturation and Development Supports the Development of Porcine Embryos

Melatonin has been reported to improve the in vitro development of embryos in some species. This study was conducted to investigate the effect of melatonin supplementation during in vitro maturation (IVM) and development culture on the development and quality of porcine embryos. In the first experiment, when the in vitro fertilized embryos were cultured with different concentrations of melatonin (0, 10, 25 and 50 ng/ml) for 8 days, the blastocyst formation rate of embryos cultured with 25 ng/ml melatonin (10.7%) was significantly increased (p < 0.05) compared to the control embryos cultured without melatonin (4.2%). The proportion of DNA‐fragmented nuclei in blastocysts derived from embryos cultured with 50 ng/ml melatonin was significantly lower (p < 0.05) than that of embryos cultured without melatonin (2.1% vs 7.2%). In the second experiment, when oocytes were cultured in the maturation medium supplemented with different concentrations of melatonin (0, 10, 25 and 50 ng/ml), fertilized and then cultured with 25 ng/ml melatonin for 8 days, there were no significant differences in the rates of cleavage and blastocyst formation among the groups. However, the proportions (2.7–5.4%) of DNA‐fragmented nuclei in blastocysts derived from oocytes matured with melatonin were significantly decreased (p < 0.05) compared to those (8.9%) from oocytes matured without melatonin, irrespective of the concentration of melatonin. Our results suggest that supplementation of the culture media with melatonin (25 ng/ml) during IVM and development has beneficial effects on the developmental competence and quality of porcine embryos.     

Seed germination and seedling establishment of the monocarpic dwarf bamboo Sasa veitchii var. hirsuta

In order to determine the influences of environmental factors on seed germination and to identify the effects of germination characteristics on seedling establishment for Sasa veitchii var. hirsuta, germination experiments and a survey on current seedling dynamics were conducted in a natural habitat after mass flowering. The results of the germination experiments revealed that the seeds require a low-temperature environment for germination; those exposed to low-temperature conditions for a time similar to the length of winter (4 months of low-temperature conditions) germinated gradually, while those exposed for longer (>4 months of low-temperature conditions) germinated rapidly. These results were compatible with field observations indicating that seedlings emerged from June to October in the year after mass flowering, and they suggested this germination characteristic (i.e., variation of germination timing due to seed dormancy) may play an ecological function in spreading risk (although it may also increase the potential for seed predation). The results also revealed that stronger light and alternating temperature conditions had no effect on germination, whereas high temperatures and drying had negative effects. The outcomes of the survey on current seedling dynamics revealed that the seedling establishment ratio was high in a forest understory compared to that seen at a site where solar radiation was strong and soil water content was low. This implies that germination characteristics may promote seedling establishment in forest understory.     

Foraging adaptation and the relationship between food-web complexity and stability

Ecological theory suggests that complex food webs should not persist because of their inherent instability. "Real" ecosystems often support a large number of interacting species. A mathematical model shows that fluctuating short-term selection on trophic links, arising from a consumer's adaptive food choice, is a key to the long-term stability of complex communities. Without adaptive foragers, food-web complexity destabilizes community composition; whereas in their presence, complexity may enhance community persistence through facilitation of dynamical food-web reconstruction that buffers environmental fluctuations. The model predicts a linkage pattern consistent with field observations.     

Alteration of methylation profiles in distinct cell lineages of the layers during vegetative propagation in carnations (Dianthus caryophyllus)

In vegetatively propagated plants, branches of periclinal chimera give rise to bud mutants, or “sports”, which have been used to breed new cultivars. Here, we have examined DNA methylation profiles in the cells of the L1 and L2+3 layers from single plants of vegetatively propagated carnations. The band patterns of methylation-sensitive amplified fragment polymorphism (M-AFLP) of the genomic DNAs in the L1 and L2+3 layers of the carnation cultivar, “White Sim”, vegetatively propagated over the past 50 years, were completely different. The bud mutant, “White Mind”, obtained from “White Sim” about 25 years ago, also had very different M-AFLP patterns to the parental “White Sim” line. The cultivar, “Red”, which was separated from “Satisfaction” as a bud mutant two years ago, showed similar patterns to “Satisfaction” in each corresponding layer. However, we were able to detect minor, but significantly different M-AFLP patterns between the cultivars, “Red” and “Satisfaction”. The number of bands that differed between these cultivars was larger in the L2+3 layers than in the L1 layers. The results indicate that the DNA methylation profiles differ between each cell layer derived from distinct cell lineages of vegetatively propagated plants, and that changes in these profiles occur frequently and accumulate in the cells of the L2+3 layers, rather than in the L1 layer. This revised version was published online in July 2006 with corrections to the Cover Date.     

Genetic mapping of the genes for glaucous leaf and tough rachis in Aegilops tauschii, the D-genome progenitor of wheat

Glaucous leaf and tough rachis phenotypes are rare in Aegilops tauschii, the D genome donor to common wheat (Triticum aestivum). The genes for glaucous leaf and tough rachis were mapped using microsatellite probes in A. tauschii. The glaucous phenotype was suppressed by the inhibitor W2^I located on chromosome 2DS. The gene W2^I was mapped to the distal part of 2DS, and was unlinked to the centromere. This suggests that the distance of the W2^I locus from the centromere was maintained during the evolution of hexaploid wheat from its diploid progenitors as the inhibitor gene is at the same position in A. tauschii and bread wheat. The Br^t (Brittle rachis of A. tauschii) locus was located on the short arm of chromosome 3D, and was 19.7 cM from the centromeric marker, Xgdm72.3D. Br^t causes breakage of the spike at the nodes, thus creating barrel-shaped spikelets, while Br₁ in hexaploid wheat causes breakage above the junction of the rachilla with the rachis such that a fragment of rachis is attached below each spikelet.     

Is It Possible to Use 90Sr and 137Cs As Tracers for the Aeolian Dust Transport?

A noble approach for the estimation of the deposition of the Asian dust over Japan by using atmospheric anthropogenic radioactivity, ⁹⁰Sr and ¹³⁷Cs, is proposed. Those radioactivities once deposited globally onto the ground by the past nuclear test, etc. are resuspended along with the surface soil particles in the air by the storm and deposited again on the ground. The difference in ¹³⁷Cs/⁹⁰Sr activity ratios in the surface soil between dry and wet climatic conditions gives a clue to know about the source of the dust. It was found that the average activity ratio in the deposited material (average: 2.1, n=82) at MRI, Tsukuba in the 1990s is not close to that of the surface soil taken in neighborhood (median: 6.8, n=8), which had been considered as the primary source. While, it is close to that of the soil samples taken in the arid area in the Asian continent (median: 2.0, n=4), which is the one of the source regions of the aeolian dust. Thus we can reasonably assume that deposited dust in Tsukuba is brought not only from the neighboring fields, etc. but also from the arid area in the continent. Using a simple two-component model it was estimated that the Asian dust may transport about 90% of ⁹⁰Sr and 70% of ¹³⁷Cs depositions observed in Tsukuba in the 1990s. Also, Asian dust may transport about 2/3 of the dust deposited in Tsukuba.