Effect of rice variety on methane emission from an Indonesian paddy field

Variations in CH₄ emission from a Sumatra paddy field in which 8 popular modern varieties in Indonesia were grown were compared in the 1994/1995 rainy season. Total amounts of CH₄ emitted during the period of rice growth were in the ranges of 32.6-41.7 and 51.3–64.6 g CH₄ m^-2 for the plots amended with chemical fertilizer only and those amended with both rice straw and chemical fertilizer, respectively. The mean CH₄ emission rate was highest in the plot with the variety Bengawan solo and lowest in the plots with the varieties Atomita-4 and Way seputih among the plots which received chemical fertilizer, while highest in the plot with Way seputih and lowest in the plot with Bengawan solo among the plots amended with both rice straw and chemical fertilizer. The increase in the mean CH₄ emission rates by rice straw application was higher for the plots planted with Way seputih (1.98 times) and Atomita-4 (1.77 times) than for the plots with Bengawan solo (1.23 times) and IR-64 (1.35 times). The plots with Walanai and Cisanggarung recorded intermediate mean emission rates and the increase in CH₄ emission by rice straw application was also intermediate (1.57–1.64 times). It was noteworthy that Way seputih and Atomita-4 were derived from the variety Cisadane, Bengawan solo and IR-64 from the variety IR-54, and Walanai and Cisanggarung from the varieties IR-36 and Pelita 1-1, respectively.

The amounts of CH. emitted for 1 kg grain production ranged from 53 (Atomita-4) to 74 (Kapuas and Walanai) and from 89-93 (IR-64, Bengawan solo, and Atomita-4) to 121 (Kapuas) g CH₄ kg^-1 of grain for the plots amended with chemical fertilizer and those amended with rice straw and chemical fertilizer, respectively.     

Effect of retinoic acid on gene expression profiles of bovine intramuscular preadipocytes during adipogenesis

To investigate genes involved in intramuscular adipogenesis in ruminants, 16 genes with dramatic variable expression were selected. These were selected from the differentiation‐ and proliferation‐phase libraries of our previous serial analysis of gene expression (SAGE) studies of a clonal bovine intramuscular preadipocyte (BIP) cell line. We harvested the BIP cells over 12 days after adipogenic stimulation with all‐trans retinoic acid (ATRA). Quantitative real‐time PCR confirmed the earlier SAGE study results of the expression patterns of 15 of the genes. On day 6, TG accumulation increased significantly in the BIP cells but was completely inhibited in the 3T3‐L1 cells (the monogastric reference). ATRA enhanced expression levels of six genes whereas it suppressed expression of eight genes on day 3 of adipogenesis in the BIP cells. Forty‐eight hours after transfection, the messenger RNA expression level of the adipose differentiation‐related protein (ADFP), encoded by one of the upregulated genes, in the ADFP small interference RNA (siRNA)‐transfected cells was 3.5% of that in negative control‐transfected cells. Also, 6 days after induction the TG level in the ADFP siRNA‐transfected cells was 21.8% lower than that in negative control‐transfected cells. This analysis of gene expression profiles after ATRA treatment will contribute to our understanding of the molecular mechanisms involved in bovine intramuscular adipogenesis.     

Heritability and genetic correlation estimates of semen production traits with litter traits and pork production traits in purebred Duroc pigs

We estimated heritabilities of semen production traits and their genetic correlations with litter traits and pork production traits in purebred Duroc pigs. Semen production traits were semen volume, sperm concentration, proportion of morphologically normal sperms, total number of sperm, and total number of morphologically normal sperm. Litter traits at farrowing were total number born, number born alive, number stillborn, total litter weight at birth, mean litter weight at birth, and piglet survival rate at birth. Litter traits at weaning were litter size at weaning, total litter weight at weaning, mean litter weight at weaning, and piglet survival rate from birth to weaning. Pork production traits were average daily gain, backfat thickness, and loin muscle area. We analyzed 45,913 semen collection records of 896 boars, 6,950 farrowing performance records of 1,400 sows, 2,237 weaning performance records of 586 sows, and individual growth performance records of 9,550 animals measured at approximately 5 mo of age. Heritabilities were estimated using a single-trait animal model. Genetic correlations were estimated using a 2-trait animal model. Estimated heritabilities of semen production traits ranged from 0.20 for sperm concentration to 0.29 for semen volume and were equal to or higher than those of litter traits, ranging from 0.06 for number stillborn and piglet survival rate at birth to 0.25 for mean litter weight at birth, but lower than those of pork production traits, ranging from 0.50 for average daily gain to 0.63 for backfat thickness. In many cases, the absolute values of estimated genetic correlations between semen production traits and other traits were smaller than 0.3. These estimated genetic parameters provide useful information for establishing a comprehensive pig breeding scheme.     

Establishment and biological characterization of canine histiocytic sarcoma cell lines

Seven novel cell lines from canine histiocytic sarcoma (HS), three of which were disseminated cutaneous HS and four of which were synovial HS, were established. All of the established cell lines had the same morphological (by light and electron microscopic findings), cytochemical (alpha-naphthyl butyrate esterase-positive), and immunohistochemical (vimentin- and lysozyme-positive, and cyto-keratin-negative) characteristics as the original HS tumor cells. All of the established cell lines injected into nude mice subcutaneously produced solid tumors. Because the established cell lines also showed phagocytic and processing activities, the HS tumor cells appear to originate from the mononuclear phagocytic system cells, despite their differences in locations or organs.     

Evaluation of a recombinant measles virus expressing hepatitis C virus envelope proteins by infection of human PBL-NOD/Scid/Jak3null mouse

In this study, we infected NOD/Scid/Jak3null mice engrafted human peripheral blood leukocytes (hu-PBL-NOJ) with measles virus Edmonston B strain (MV-Edm) expressing hepatitis C virus (HCV) envelope proteins (rMV-E1E2) to evaluate the immunogenicity as a vaccine candidate. Although human leukocytes could be isolated from the spleen of mock-infected mice during the 2-weeks experiment, the proportion of engrafted human leukocytes in mice infected with MV (10³–10⁵ pfu) or rMV-E1E2 (10⁴ pfu) was decreased. Viral infection of the splenocytes was confirmed by the development of cytopathic effects (CPEs) in co-cultures of splenocytes and B95a cells and verified using RT-PCR. Finally, human antibodies against MV were more frequently observed than E2-specific antibodies in serum from mice infected with a low dose of virus (MV, 10⁰–10¹ pfu, and rMV-E1E2, 10¹–10² pfu). These results showed the possibility of hu-PBL-NOJ mice for the evaluation of the immunogenicity of viral proteins.     

Virulence of the Populations of the Whitebacked Planthopper, Sogatella furcifera Reared on Different Resistant Rice Varieties

ARC and ND colony were obtained by rearing the whitebacked planthopper (WBPH), Sogatella furcifera(Horvath), exclusively on ARC10239 (ARC, carrying resistance gene Wbph2) and N‘Diang Marie (ND, carrying resistance gene WbphS) till 15 generations. Taichung Native 1 (TN1) and Rathu Heenati (RHT) served as susceptible and resistant check, respectively. The results of electronic recording revealed that duration of salivation and X-waveform of the two colonies on their corresponding hosts was short while the duration of phloem ingestion was long. The amount of honeydew excreted by ARC and ND colony did not differ on their corresponding host varieties from TN1 and was much higher than that of RHT. The number of eggs laid on their host varieties and TN1 were significantly higher than that on RHT. No distinct change was observed for these two colonies in term of percentage of developed eggs. The nymph survival rate of ND colony on its selection host was 45.0%, significantly different from that on TN1(71.4%0) and RHT(21.0%), while that of ARCcolony was 68. 3%, not significantly different from that on TN1(77.5%), but much higher than that on RHT(22.6%).The nymphal development duration of these two colonies on the corresponding hosts was not different from that on TN1, but significantly shorter than that on RHT. In brief, these two colonies had almost adapted to their corresponding host varieties based on feeding and oviposition, but the nymphal survival rate of ND colony was still low.     

Effect of stand density and humus removal on regeneration of Pinus densiflora seedlings in a mixed conifer and broad-leaved forest

We studied the impact of stand density and forest floor humus removal on regeneration of Pinus densiflora in a mixed conifer and broad-leaved forest on the Daimonji-Yama Mountain,Kyoto,Japan.Three levels of stand density were set,i.e.,a clear-cut site,a heavily thinned site and a lightly thinned site.In each density treatment,comparisons were carried out between humus removal (A 0 -free)and humus intact(A 0 -intact)subplots.We counted the emergence of sown pine seeds and measured survival and growth of pine seedlings over the next four years.In addition,light conditions and the recovery of understory were monitored.Results show that thinning intensity and humus removal promoted the establishment and growth of seedlings.One exception,however,was that seedling growth was minimal in the heavily thinned A 0 -intact subplots.This was due to a strong response of understory vegetation growth on the treatment combination,which hindered the pine seedling growth.Furthermore,we found that the canopy openness measured at 1.3-m height remained at least 35%for the heavily thinned site in 2008.The results suggest that the removal of the A 0 layer after heavy thinning is the most effective and labor-saving operation for P.densiflora regeneration.