Age and growth of two gizzard shads, <Emphasis Type="Italic">Nematalosa come</Emphasis> and <Emphasis Type="Italic">N. japonica</Emphasis>, in coastal waters around Okinawa Island,southwestern Japan

The age and growth of two Nematalosa species around Okinawa Island were examined using sectioned otoliths collected from September 2003 to April 2006. Monthly changes in the frequency of the appearance of a translucent band on the outer margin of the otoliths indicated that ring formation occurred once a year from January to July for Nematalosa come and from January to March for Nematalosa japonica. The von Bertalanffy growth equations for both species were as follows: N. come: L _t  = 365.5{1 − exp[−0.111 × (t + 0.288)]} for females and L _t  = 214.7{1 − exp[−0.700 × (t – 1.110)]} for males; N. japonica: L _t  = 205.1{1 − exp[−1.068 × (t − 1.180)]} for females and L _t  = 195.5 {1 − exp[−1.293 × (t − 1.269)]} for males. The maximum ages observed for N. come and N. japonica were 11 and 6 years old, respectively. The growth of these species was characterized by the slow growth of N. come over many years, resulting in a larger size than N. japonica.     

Quantitative analysis of <Emphasis Type="Italic">Ichthyobodo salmonis</Emphasis> an ectoparasitic flagellate infecting juvenile chum salmon <Emphasis Type="Italic">Oncorhynchus keta</Emphasis> in hatcheries

Ichthyobodosis caused by the ectoparasitic flagellate Ichthyobodo salmonis is a significant cause of mortality in juvenile chum salmon Oncorhynchus keta reared in hatcheries of northern Japan. The present study established a real-time quantitative polymerase chain reaction assay (qPCR) of I. salmonis ribosomal DNA (rDNA) using SYBR Green. This assay allows monitoring of parasite infections for the epidemiological study and control of ichthyobodosis in hatcheries. qPCR showed high reproducibility for measurements between 1.0 and 1.0 × 10⁸ rDNA copy/μl. There was a significant positive correlation between the number of parasites and the amount of I. salmonis rDNA. A survey using the qPCR assay indicated that infection by I. salmonis was present in 23 of 87 hatcheries; parasite loads were estimated to be between 50 and 750 parasites/g juvenile body weight. These results demonstrate that our qPCR assay enables the surveying of juvenile chum salmon reared in hatcheries for infection by I. salmonis.     

Radiographic evaluation of obesity-caused oppression of the thoracic cavity in beagles

Thoracic radiographs of fifteen beagles with mild-to-moderate obesity revealed that oppression of the thoracic cavity increased with increasing degree of obesity. Oppression of the thoracic cavity was evaluated based on the length, depth, width and area of the thoracic cavity. To obtain thoracic radiographs at the terminal inspiration and expiration phases, thoracic fluororadiographs were recorded with a digital video camera. Bodyweight and the depth of the back fat layer at the seventh lumbar vertebra (DB, measured by ultrasonography) were used as indicators of the degree of obesity. The length of the thoracic cavity tended to become shorter and the depth and width of the thoracic cavity tended to increase as bodyweight increased and as DB increased. On the other hand, the area of the thoracic cavity was not clearly related to bodyweight or DB. These results suggest that oppression of the thoracic cavity due to the cranial shift of the diaphragm is compensated for by increases in the depth and width of the thoracic cavity in beagles with mild-to-moderate obesity.     

Identificaiton of a clubroot resistance locus conferring resistance to a Plasmodiophora brassicae classified into pathotype group 3 in Chinese cabbage (Brassica rapa L.)

In Chinese cabbage (Brassica rapa), the clubroot resistance (CR) genes Crr1 and Crr2 are effective against the mild Plasmodiophora brassicae isolate Ano-01 and the more virulent isolate Wakayama-01, but not against isolate No. 14, classified into pathotype group 3. ‘Akiriso’, a clubroot-resistant F₁ cultivar, showed resistance to isolate No. 14. To increase the durability of resistance, we attempted to identify the CR locus in ‘Akiriso’. CR in ‘Akiriso’ segregated as a single dominant gene and was linked to several molecular markers that were also linked to CRb, a CR locus from cultivar ‘CR Shinki’. We developed additional markers around CRb and constructed partial genetic maps of this region in ‘Akiriso’ and ‘CR Shinki’. The positions and order of markers in the genetic maps of the two cultivars were very similar. The segregation ratios for resistance to isolate No. 14 in F₂ populations derived from each of the two cultivars were also very similar. These results suggest that the CR locus in ‘Akiriso’ is CRb or a tightly linked locus. The newly developed markers in this study were more closely linked to CRb than previously reported markers and will be useful for marker-assisted selection of CRb in Chinese cabbage breeding.     

Detection of QTLs for white-back and basal-white grains caused by high temperature during ripening period in japonica rice

There is increasing evidence that global warming affects the development of rice. High temperatures during ripening increase the ratio of undesirable chalky grains followed by deteriorating grain appearance quality. In order to detect quantitative trait loci (QTLs) controlling the occurrence of white-back and basal-white chalky grains of brown rice, QTL analysis was performed using recombinant inbred lines derived from a cross between two strains, ‘Tsukushiroman’ (sensitive to heat stress) and ‘Chikushi 52’ (tolerant of heat stress). The F₇ and F₈ lines were exposed to heat stress during the ripening period in two locations, Fukuoka and Kagoshima, in Japan. QTLs for white-back grains and basal-white grains were detected on chromosomes 1, 3, and 8, and those for basal-white grains were detected on chromosomes 2, 3, and 12. QTLs on chromosome 8 for white-back grains were shared in the plants grown in both locations. Near-isogenic lines (NILs), which harbored a segment from ‘Chikushi 52’ on chromosome 8 with the genetic background of ‘Tsukushiroman’, showed relatively lower ratios of white-back grains than ‘Tsukushiroman’. Therefore, insertion of the ‘Chikushi 52’ genomic region of the QTL on chromosome 8 can improve the quality of rice when it is grown under heat stress conditions.     

Material Damage Caused by Acidic Air Pollution in East Asia

Atmospheric and laboratory corrosion tests were carried out to assess the intensity of air pollution in East Asia. Qualitative and quantitative atmospheric corrosion was estimated from the damage caused to bronze, copper, steel, marble, cedar, cypress and urushi (Japanese lacquer) plates, exposed to outdoor and indoor airs in some cities of East Asia. Brochantite and cuprite were formed on copper at sites where the sulfur dioxide concentrations were high, and basic cupric nitrate and cuprite at sites where nitrogen dioxide concentrations were high. Gypsum was formed on marble pieces exposed to indoor air at all sites but was not found on pieces exposed to outdoor air. Numerous fine spots (0.2–0.3 mm in diameter) were observed on surfaces of urushi plates exposed at foggy cities such as Chongqing, China and Taejon, Korea. The effects of atmospheric and meteorological factors on the damage to copper and marble plates in several cities in East Asia were estimated using regression analysis. The results indicate that sulfur dioxide is the most destructive of materials especially in China and South Korea. In Japan copper plates may be damaged under natural conditions and by sea salt. Copper may also be damaged by surface deposition of sulfur and chlorine. Marble may be substantially degraded by gaseous sulfur dioxide but sulfate ions in rain had no effect. The analysis of air pollution from the point of view of material damage was very useful in evaluating and visualizing the intensity of air pollution in East Asia.     

Effect of root exudates on growth of newly isolated nitrifying bacteria from barley rhizoplane

An ammonia-oxidizing bacterium, strain PJA1, and nitrite-oxidizing bacterium, strain PJN1, were newly isolated from the rhizoplane of barley. The cells of strain PJA1 were lobate, compartmentalized, and showed characteristics of the genus Nitrosolobus. The similarity of the 16S rRNA gene to Nitrosolobus multiformis ATCC25196 was 99.04%. The cells of strain PJN1 were rod-shaped. The similarity of the 16S rRNA gene to Nitrobacter agilis ATCC14123 was 98.57%. These newly isolated bacteria were identified as Nitrosolobus sp. PJA1 and Nitrobacter sp. PJN1, respectively. The exudates prepared from barley roots of both the pre-heading and post-heading stages promoted the growth of strain PJA1 (15–20% increase). The growth of the non-rhizoplane strains like Nitrosomonas europaea ATCC25978 was remarkably inhibited by the exudates. The growth of strain PJN1 was also remarkably promoted by the root exudates at the pre-heading stage (6 time increase), and by the root exudates at the post-heading stage (2.5 time increase). The root exudates did not effect the growth of Nitrobacter winogradskyi IFO14297, isolated from the non-rhizoplane.     

Loss of natural coastline influences species diversity of anemonefish and host anemones in the Ryukyu Archipelago

1. Anemonefish and host anemones are distributed in the shallow waters of coral reefs, and thus their existence may be affected by coastal development. The Ryukyu Archipelago includes the Okinawa and Sakishima Islands; the former has experienced extensive land reclamation and drainage in coastal areas while the latter still mostly contains natural coasts. To consider the layout of protected areas needed to conserve diversity of host anemones and anemonefish in the Ryukyu Archipelago, the community structure and coexistence mechanisms of anemones and anemonefish were compared between Okinawa and Sakishima Islands.
2. Six species of anemonefish and seven species of host anemone are distributed in both islands. Among 15 species-pair interactions observed in six species of anemonefish in the Sakishima Islands, 14 were explained by the niche differentiation hypothesis and only one interaction was explained by the cohabitation hypothesis. In the Okinawa Islands, 13 interactions were explained by the niche differentiation hypothesis, one by the cohabitation hypothesis and one by the lottery hypothesis.
3. For both host anemones and anemonefish, β-diversity in the Okinawa Islands was lower and had a more nested structure than that of the Sakishima Islands. β-Diversity and its nestedness did not differ between the two regions excluding study sites adjacent to coastlines, suggesting that differences in the coastal environment affected the diversity of anemones and anemonefish in the Ryukyu Archipelago.
4. These results suggested that there is an urgent need to prioritize the conservation of reef edges, where species diversity is relatively higher than directly next to the terrestrial coastline in Okinawa Island. In the Sakishima Islands, where many natural coasts remain, a wider area from directly next to the coast out to the reef edge needs to be comprehensively protected to increase β-diversity.

     

Age,growth and maturation of the blackspot snapper <Emphasis Type="Italic">Lutjanus fulviflammus</Emphasis> around Okinawa Island,Japan

ABSTRACT:   The blackspot snapper Lutjanus fulviflammus is one of the most common Lutjanus species landed and consumed on Okinawa Island, Japan. Using 901 fish (29.9–304.2 mm in standard length; SL) obtained from fish markets or caught by angling, the age, growth, maturation size and maturation age were estimated. Each opaque zone formed on the otolith every year correlated with their spawning and was thought to be an annual ring. The main spawning season was estimated to be from April to July, which peaked in May and June, with a few mature fish collected in August and September. Maximum ages were observed as 24 years for both sexes and L_∞ (mm SL), K and t₀ (years) of the von Bertalanffy growth formula were estimated to be 276, 0.144 and −5.22 for females and 247, 0.227 and −3.18 for males, respectively. First maturation size and age were estimated to be 175 mm SL and 2 years for both sexes. A faster growth rate up to 2 years will allow reproduction at a young age and provide many chances for spawning throughout their long life. Furthermore, the possibility exists that populations would easily recover if regulations were established.