Changes in microbial biomass and microbial activity of pig slurry after the transit through the gut of the earthworm Eudrilus eugeniae (Kinberg, 1867)

Here we studied the effects of gut transit through the earthworm Eudrilus eugeniae, on the physicochemical, biochemical, and microbial characteristics of pig slurry, by analyzing fresh casts. The reduction in the dissolved organic C contents in casts we recorded suggests that during digestion, earthworms assimilated labile organic C preferentially, which is a limiting growth factor for them. Furthermore, both microbial biomass and activity in pig slurry were significantly decreased by earthworm gut transit. It appears that E. eugeniae is able to digest microorganisms, although the addition of glucose to the food increased respiration, indicating that growth of microorganisms in casts could be limited by depletion of labile C. Despite reduced microbial biomass and activity, the metabolic diversity of microbial communities was greater in casts than in original pig slurry. Community level physiological profiles obtained from Biolog Ecoplate data revealed that, after earthworm gut transit, the microbial communities in casts and pig slurry were clearly differentiated by their physiological profiles. The results indicate that first stage in vermicomposting of pig slurry by E. eugeniae, i.e., casting, produced changes that will influence the dynamics of the organic matter degradation by reducing forms of N and C available to microorganisms, hence restricting their growth and multiplication. Nevertheless, the reduced microflora of casts was characterized by an increased catabolic potential that might lead to thorough degradation of pig slurry.     

Maize grain production,plant nutrient concentration and soil chemical properties in response to different residue levels from two previous crops

ABSTRACT

The incorporation of previous crop residues in agricultural management benefits soil fertility, crop production, and environment. However, there is no enough information about maximum residue application level without negative effect over next crop yield. To evaluate maize (Zea mays L.) yield under short-time conservation management with incorporation and/or importation of different residue levels, a biannual rotation experiment was conducted in ash volcanic soil in south-central Chile. The experiment consisted of two previous crops, canola (Brassica napus L.) and bean (Phaseolus vulgaris L.), and four levels of residue incorporation (0%, 50%, 100%, and 200% of generated residue; from 0 to 21.4?Mg?ha^?1 for canola and from 0 to 19.0?Mg?ha^?1 for bean). Previous crop species and residue level affected some nutrients concentrations in grain and plant and some soil chemical properties, without effect in maize yield, which averaged 16.6?Mg?ha^?1. Bean residue increased Ca and reduced S in maize plant, increasing soil P, Ca, Mg and K (P?<?0.05). Maize grain Ca content was positively and proportionally affected by canola residue level and negatively and proportionally affected by bean residue level. All canola residue levels increased soil pH and Mg, but the highest level reduced soil S; soil P concentration increased proportionally with bean residue level. The highest bean residue level increased soil S. Different crop and levels of residue did not affect maize yield but did some plant nutrient concentration, and also affected some soil chemical properties.     

‘Rocha’ pear firmness predicted by a Vis/NIR segmented model

We present a segmented partial least squares (PLS) prediction model for firmness of ‘Rocha’ pear (Pyrus communis L.) during fruit ripening under shelf-life conditions. Pears were collected from three different orchards. Orchard I provided the pears for model calibration and internal validation (set 1). These were transferred to shelf-life in the dark at 20 ± 2 °C and 70% RH, immediately after harvest. External validation was performed on the pears from the other two orchards (sets 2 and 3), which were stored under different conditions before shelf-life. Fruit was followed in the shelf-life period by visible/near infrared reflectance spectroscopy (Vis/NIRS) in the range 400–950 nm. The correlation between firmness and the reflectance at some wavelength bands was markedly different depending on ripening stage. A segmented partial least squares model was then constructed to predict firmness. This PLS model has two segments: (1) unripe and ripening/ripe pears (high firmness); (2) over-ripe pears (low firmness). The prediction is done in two steps. First, a full range model (full model) is applied. When the full model prediction gives a low firmness value, then the over-ripe model is applied to refine the prediction. The full model is reasonably significant in regression terms, robust, but allows only a coarse quantitative prediction (standard deviation ratio, SDR = 2.48, 1.50 and 2.40 for sets 1, 2 and 3, respectively). Also, RMSEP% = 139%, 91% and 56%, indicating large relative errors at low firmness values. The segmented model improved moderately the correlation, and the values of RMSEC, RMSEP and SDR; it improved significantly the RMSEP% (29%, 55% and 31%), providing an improvement of the relative prediction errors at low firmness values. This method improves the ordinary PLS models. Finally, we tested whether chlorophyll alone was enough for a predictive model for firmness, but the results showed that the absorption of chlorophyll alone does not explain the performance of the PLS models.     

Land‐use effects on the distribution of soil organic carbon within particle‐size fractions of volcanic soils in the Transmexican Volcanic Belt (Mexico)

The aim of this study was to determine the effect of land‐use and forest cover depletion on the distribution of soil organic carbon (SOC) within particle‐size fractions in a volcanic soil. Emphasis was given to the thermal properties of soils. Six representative sites in Mexico were selected in an area dominated by Andosols: a grassland site, four forested sites with different levels of degradation and an agricultural site. Soils were fractionated using ultrasonic energy until complete dispersion was achieved. The particle‐size fractions were coarse sand, fine sand, silt, clay and particulate organic matter from the coarse sand sized fraction (POM‐CS) and fine sand (POM‐FS). Soil organic carbon decreased by 70% after forest conversion to cropland and long‐term cultivation; forest cover loss resulted in a decrease in SOC of up to 60%. The grassland soil contained 45% more SOC than the cropland one. Soil organic carbon was mainly associated with the silt‐size fraction; the most sensitive fractions to land‐use change and forest cover depletion were POM followed by SOC associated with the silt and clay‐sized fractions. Particulate organic matter can be used as an early indicator of SOC loss. The C lost from the clay and silt‐sized fractions was thermally labile; therefore, the SOC stored in the more degraded forest soils was more recalcitrant (thermally resistant). Only the transformation of forest to agricultural land produced a similar loss of thermally stable C associated with the silt‐sized fraction.     

Influence of agro-industrial wastes on the sorption,desorption, and distribution of copper in soils polluted by mine tailings

Journal of Soils and Sediments - The objective of this work was to modify minimally two agro-industrial wastes, to evaluate their effectiveness for the retention of copper in soils contaminated by...     

Expression of the Antimicrobial Peptide Piscidin 1 and Neuropeptides in Fish Gill and Skin: A Potential Participation in Neuro-Immune Interaction

Antimicrobial peptides (AMPs) are found widespread in nature and possess antimicrobial and immunomodulatory activities. Due to their multifunctional properties, these peptides are a focus of growing body of interest and have been characterized in several fish species. Due to their similarities in amino-acid composition and amphipathic design, it has been suggested that neuropeptides may be directly involved in the innate immune response against pathogen intruders. In this review, we report the molecular characterization of the fish-specific AMP piscidin1, the production of an antibody raised against this peptide and the immunohistochemical identification of this peptide and enkephalins in the neuroepithelial cells (NECs) in the gill of several teleost fish species living in different habitats. In spite of the abundant literature on Piscidin1, the biological role of this peptide in fish visceral organs remains poorly explored, as well as the role of the neuropeptides in neuroimmune interaction in fish. The NECs, by their role as sensors of hypoxia changes in the external environments, in combination with their endocrine nature and secretion of immunomodulatory substances would influence various types of immune cells that contain piscidin, such as mast cells and eosinophils, both showing interaction with the nervous system. The discovery of piscidins in the gill and skin, their diversity and their role in the regulation of immune response will lead to better selection of these immunomodulatory molecules as drug targets to retain antimicrobial barrier function and for aquaculture therapy in the future.     

First report of rhizopus soft rot on soursop (Annona muricata) caused by Rhizopus oryzae in México

Journal of Plant Diseases and Protection - The soursop (Annona muricata) is an important tropical plant in the Pacific and Gulf region of México. In a farmer plantation during May, severe soft...     

Evaluation of cassava germplasm for drought tolerance under field conditions

The development of cassava (Manihot esculenta Crantz) with a high yield under water-deficit conditions is one of the goal of the breeding programs. The objective of this study was to evaluate the performance and to select cassava accessions based on drought tolerance indices and productive potential under water stress. Forty-nine accessions were evaluated for five agronomic traits (plant height—PH, root yield—RoY, shoot yield—ShY, harvest index—HI; and dry matter content of roots—DMC) under full irrigation conditions and drought stress (DS). The accessions were selected based on: (i) high yield under drought conditions (HY-DS) and (ii) high drought tolerance (Dr-To) based on six different indices. Overall, water stress dramatically reduced the traits’ means (RoY—72.98%, ShY—54.95%, DMC—26.15%, HI—31.05%, and PH—32.95%). Low coincidence among the top ten accessions was identified based on HY-DS and Dr-To criteria. Therefore, considering only the most important traits (RoY and ShY), five accessions (BGM0815, BGM0598, 9624-09, BGM0818, and BRS Formosa) presented high HY-DS. In contrast, to Dr-To criterion, eight and nine accessions were selected for high yield of the aerial part (ShY and PH) and roots (RoY and DMC), respectively. The mean productivity, geometric mean productivity, and drought tolerance indices were the most promising to identify genotypes with high agronomic attributes, while drought susceptibility index, susceptibility, and yield stability index were suitable to identify the most drought tolerant accessions. This set of selected accessions can be used in breeding programs aimed at high yield and drought tolerance.     

Strong fisheries management and governance positively impact ecosystem status

Fisheries have had major negative impacts on marine ecosystems, and effective fisheries management and governance are needed to achieve sustainable fisheries, biodiversity conservation goals and thus good ecosystem status. To date, the IndiSeas programme (Indicators for the Seas) has focussed on assessing the ecological impacts of fishing at the ecosystem scale using ecological indicators. Here, we explore fisheries ‘Management Effectiveness’ and ‘Governance Quality’ and relate this to ecosystem health and status. We developed a dedicated expert survey, focused at the ecosystem level, with a series of questions addressing aspects of management and governance, from an ecosystem‐based perspective, using objective and evidence‐based criteria. The survey was completed by ecosystem experts (managers and scientists) and results analysed using ranking and multivariate methods. Results were further examined for selected ecosystems, using expert knowledge, to explore the overall findings in greater depth. Higher scores for ‘Management Effectiveness’ and ‘Governance Quality’ were significantly and positively related to ecosystems with better ecological status. Key factors that point to success in delivering fisheries and conservation objectives were as follows: the use of reference points for management, frequent review of stock assessments, whether Illegal, Unreported and Unregulated (IUU) catches were being accounted for and addressed, and the inclusion of stakeholders. Additionally, we found that the implementation of a long‐term management plan, including economic and social dimensions of fisheries in exploited ecosystems, was a key factor in successful, sustainable fisheries management. Our results support the thesis that good ecosystem‐based management and governance, sustainable fisheries and healthy ecosystems go together.