Forest drainage: a threat to benthic biodiversity of boreal headwater streams?

1. Forest drainage, including mainly ditching of waterlogged peatlands in order to increase wood growth, has caused substantial changes in the hydrology and water quality of Finnish streams. However, knowledge on the ecological impact of these changes is poor. This paper studies the potential impact of forest drainage, catchment characteristics and habitat factors on the water quality and benthic macroinvertebrates in headwater streams of the River Isojoki, western Finland. An intensive programme of water sampling was carried out at nine study sites, while zoobenthic samples covered a total of 18 streams. 2. According to multivariate regression models concentrations of aluminium and suspended solids in stream water at nine study sites increased significantly with increasing forest drainage of the catchment area. Further, drainage intensity contributed significantly to the decrease in minimum values of alkalinity. 3. In a Canonical Correspondence Analysis, the variation in macroinvertebrate species distribution and abundance was largely explained by drainage intensity, moss coverage and the concentrations of aluminium and iron in stream water. A significant positive correlation was established between the species richness of benthic macroinvertebrates and the proportional cover of vegetation on the stream bed, whereas a significant negative correlation was found between species richness and sand cover. 4. The results suggest that drainage has significantly contributed to the deterioration of water quality and habitat structure, and impoverishment of benthic communities in the headwater streams of the River Isojoki. In order to protect the ecological integrity of such boreal headwater streams, more effective protection schemes in forestry practices and rehabilitation of the adversely affected streams and their catchment areas are needed. © 1998 John Wiley & Sons, Ltd.     

Npro of Bungowannah virus exhibits the same antagonistic function in the IFN induction pathway than that of other classical pestiviruses

Bungowannah virus is the most divergent atypical pestivirus that had been detected up to now, and does not fit into any of the four approved species: Bovine viral diarrhea virus type 1 (BVDV-1) and type 2 (BVDV-2), Classical swine fever virus (CSFV) and Border disease virus (BDV). However, the presence of N^pro and E^rns coding regions, which are unique to pestiviruses, provides clear evidence of a pestivirus. Nevertheless, the amino acid identity of Bungowannah virus N^pro and BVDV-1 N^pro (strain CP7) is only 51.5%. By using a BVDV-1 backbone, a novel chimeric construct was generated, in which the genomic region encoding the non-structural protein N^pro was replaced by that of Bungowannah virus (CP7_N^pro-Bungo). In vitro studies of CP7_N^pro-Bungo revealed autonomous replication with the same efficacy as the BVDV backbone CP7 and infectious high-titer virus could be collected. In order to compare the ability of interferon (IFN) suppression, two reporter gene assays, specific for type-I IFN, were carried out. In virus-infected cells, no significant difference in blocking of IFN expression between the parental virus CP7, Bungowannah virus and the chimeric construct CP7_N^pro-Bungo could be detected. In contrast, an N^pro deletion mutant showed an impaired replication in bovine cells and a marked type-I IFN response.Taken together, our findings reveal the compatibility of non-structural protein N^pro of atypical Bungowannah virus with a BVDV type 1 backbone and its characteristic feature as an inhibitor of type-I IFN induction with an inhibitor-activity comparable to other pestiviruses.     

Diagnostic value of molecular markers for <Emphasis Type="Italic">Lr</Emphasis> genes and characterization of leaf rust resistance of German winter wheat cultivars with regard to the stability of vertical resistance

Breeding for resistance is an efficient strategy to manage wheat leaf rust caused by Puccinia triticina f. sp. tritici. However, a prerequisite for the directed use of Lr genes in breeding and the detection of new races virulent to these Lr genes is a detailed knowledge on Lr genes present in wheat cultivars. Therefore, respective molecular markers for 18 Lr genes were tested for specificity and used to determine Lr genes in 115 wheat cultivars. Results obtained were compared to available pedigree data. Using respective molecular markers, genes Lr1, Lr10, Lr26, Lr34 and Lr37 were detected, but data were not always in accordance with pedigree data. However, leaf rust scoring data of field trials confirmed the reliability of DNA markers. These reliable marker data facilitated the analyses of the development of virulent leaf rust races from 2002 to 2009 based on released cultivars. A sudden change from low infection rates to susceptibility was observed for Lr1, Lr3, Lr10, Lr13, Lr14, Lr16, Lr26 and Lr37 since 2006. Cultivars carrying several leaf rust resistance genes showed no significant shift to susceptibility except one cultivar which revealed an increasing infection rate at a low level. In summary, it turned out that pedigree data are often not reliable and a detection of Lr genes by diagnostic markers is fundamental to combine Lr genes in cultivars for a durable resistance against leaf rust, and to conduct reliable surveys based on released cultivars, instead of ‘Thatcher’ NILs.     

HIV-1 proviral DNA excision using an evolved recombinase

HIV-1 integrates into the host chromosome and persists as a provirus flanked by long terminal repeats (LTRs). To date, treatment regimens primarily target the virus enzymes or virus-cell fusion, but not the integrated provirus. We report here the substrate-linked protein evolution of a tailored recombinase that recognizes an asymmetric sequence within an HIV-1 LTR. This evolved recombinase efficiently excised integrated HIV proviral DNA from the genome of infected cells. Although a long way from use in the clinic, we speculate that this type of technology might be adapted in future antiretroviral therapies, among other possible uses.     

Effect of the fungicide fenitropan on the metabolism of some higher plants and Fusarium oxysporum

The effect of fenitropan [(1RS, 2RS)-2-nitro-1-phenyltrimethylene di(acetate)], a new fungicide from EGYT Pharmacochemical Works, on the photosynthetic activity, respiration, RNA content and protein synthesis of some higher plants and Fusarium oxysporum, was investigated. The effect on the aminoacylation of tRNAs suggests that fenitropan is an inhibitor of the aminoacyl tRNA ligases accepting aromatic amino acids.