Pathogenicity,Morpho-Species and Mating Types of <Emphasis Type="Italic">Alternaria</Emphasis> spp. causing Alternaria blight in <Emphasis Type="Italic">Pistacia</Emphasis> spp. in Turkey

Alternaria genus includes many plant pathogens on numerous hosts, causing leaf spots, rots and blights. Alternaria blight has been observed as one of the important fungal diseases of pistachio (Pistacia vera L.) as well as its wild relatives (P. terebinthus, P. lentiscus, P. khinjuk, P. atlantica, P. mutica) in Turkey. Alternaria species were sampled from Pistacia spp. hosts from different geographic regions in Turkey during field trips in late spring to early fall of 2013. Alternaria blight symptoms were observed mainly on fruits and rarely on leaves. Four hundred and twenty two of the isolates were morphologically defined as A. alternata, A. tenuissima, A. arborescens and also intermediate morpho-species between A. alternata/A. arborescens. Pathogenicity of the isolates was confirmed with host inoculations on detached fruits. Mating types of 270 isolates of Alternaria spp. from the collection were identified using a PCR-based mating type assay that amplifies either a MAT1-1 or a MAT1-2 fragment from the mating locus. Although a strongly clonal population structure was expected due to the putative asexual reproduction of these fungi, both idiomorphs were detected at equal frequencies at several different spatial scales. The distribution of mating types within each geographic region, within host species as well as in overall collection was not significantly different from 1:1. Amplified fragments of partial idiomorph sequences were obtained for representative isolates. Parsimony trees were depicted based on sequence data of mating type genes for these representative isolates as well as some other Alternaria species obtained by Genebank. Several point mutations presented a few clusters which are supported by high bootsrapped values. The Alternaria blight disease agents both from cultivated and wild hosts were pathogenic on pistachio which may cause difficulties to control the disease because of extensity of pathogen sources. Besides, equal mating type distribution of the pathogen at both geographic and host species levels suggests a potential for sexual reproduction of Alternaria spp. in Turkey.     

Assessment of genetic relationships among 29 introduced and 49 local sweet cherry accessions in Turkey using AFLP and SSR markers

Summary

The characterisation of sweet cherry (Prunus avium L.) genetic resources in Turkey may help to increase their use in breeding programmes worldwide, as Turkey is the centre of origin of sweet cherry. Amplified fragment length polymorphism (AFLP) and simple sequence repeat (SSR) markers were therefore used to analyse genetic diversity among a total of 78 local and introduced sweet cherry cultivars. Four AFLP primer combinations, and six SSR primer pairs for sweet cherry were used for genetic diversity analysis. A genetic similarity matrix was calculated using the combined data from AFLP and SSR analyses with simple matching coefficient. Genetic similarities among the sweet cherry genotypes studied were higher than 42%. No two accessions had an identical AFLP and SSR marker profile, indicating that all 78 genotypes were unique. An UPGMA dendrogram, based on the similarity matrix, revealed 18 separate Groups at or above the 70% similarity level. While some Groups consisted of both introduced and local genotypes, other Groups had only local genotypes. This result suggests that there was broad genetic diversity among the local Turkish sweet cherry genotypes, which was not present in the introduced sweet cherry accessions. The genetic variation present in local Turkish sweet cherry genotypes may be useful for future breeding programmes. We found that the use of both SSR and AFLP marker systems was effective for distinguishing between genetically-close sweet cherry genotypes. These marker systems can be used to complement pomological and morphological markers during the characterisation and identification of sweet cherry genotypes.     

Genotype X environment interactions in potato (Solanum tuberosum L.)

Genotype X environment interactions were estimated for several traits in potato from a combined analysis of 11 genotypes grown at 3 locations for 2 years. Genotype X location X year and Genotype X location interactions were significant for the majority of the traits studied. Yield, reducing sugar content, dry matter content, leaf area, plant height and starch content should be tested over multiple locations and years in order to separate the genotype × environment interaction components from the total genotypic variance.     

Identification and pathogenicity of Alternaria alternata causing leaf spot disease on sweet cherry in Province of Turkey

Journal of Plant Diseases and Protection - Sweet cherry leaf spot, caused by Alternaria spp., causes significant yield losses to sweet cherry production globally. This study was aimed at...     

Pharmacokinetics and bioavailability of danofloxacin in chukar partridge (Alectoris chukar) following intravenous,intramuscular, subcutaneous,and oral administrations

The aim of the present study was to determine the pharmacokinetics (PKs) and bioavailability of danofloxacin in chukar partridge (Alectoris chukar) following intravenous (IV), intramuscular (IM), subcutaneous (SC), and oral (PO) administrations at a dose of 10 mg/kg. A total of eight clinically healthy chukar partridges weighing 480 ± 45 g were used for the investigation. The study was performed in a crossover design (2 × 2 × 2 × 2) with a 15‐day washout period between two administrations in four periods. The plasma concentrations of danofloxacin were determined using reversed‐phase high‐performance liquid chromatography. Noncompartmental PK parameters were also estimated. No local or systemic adverse drug effects were observed in any of the chukar partridges. The mean elimination half‐life ranged between 8.18 and 12.08 hr and differed statistically among administration routes. The mean peak plasma concentrations of danofloxacin following IM, SC, and PO administrations were 8.05, 9.58, and 3.39 μg/ml at 0.5, 1, and 4 hr, respectively. Following IM, SC, and PO administrations, the mean bioavailability was 86.33%, 134.40%, and 47.62%, respectively. The mean total clearance and volume of distribution at steady‐state following IV administration were 0.13 L hr^?1 kg^?1 and 0.96 L/kg, respectively. These data, including favorable PKs and the absence of adverse drug effects, suggest that danofloxacin is a useful antibiotic in chukar partridges.     

EFFECT OF PLANT GROWTH-PROMOTING RHIZOBACTERIA STRAIN ON FREEZING INJURY AND ANTIOXIDANT ENZYME ACTIVITY OF WHEAT AND BARLEY

In 2009 a greenhouse experiment was conducted to determine the effects of boron (B) and plant growth-promoting rhizobacteria (PGPR) on wheat (Triticum aestivum spp. vulgare cv ‘Bezostiya’) and barley (Hordeum vulgare cv ‘Tokak’) on plant growth, freezing injury, and antioxidant enzyme capacity. Results showed that boron (0, 1, 3, 6, 9 kg B ha^?1) and PGPR application (Bacillus megaterium M3, Bacillus subtilis OSU142, Azospirillum brasilense Sp245 and Raoultella terrigena) at which 50% of leaves were injured (LT₅₀) values and ice nucleation activities in both plants were found statistically significant. Boron application with all PGPR strains decreased LT₅₀ values in wheat and barley plants under noncold stress (NCS) and cold stress conditions (CS). There were statistically significant differences between bacterial inoculation and B fertilizer in terms of root and shoot dry weight under NCS and CS conditions. Reactive oxidative oxygen species (ROS) and antioxidant enzyme activities (SOD, POD, CAT) were negatively affected CS conditions and decreased with reduced temperatures of media, but B and PGPR applications alleviated the low-temperature deleterious effects in both plants species tested. The lowest ROS and antioxidant enzyme (SOD, POD, CAT) of wheat and barley were observed with 6 kg B ha^?1 with R. terrigena.     

Development of 8-armed airflow olfactometers for measuring olfactory responses of insect predators

In the present study two types of 8-armed airflow olfactometers are developed, one is for individual test, called the individual olfactometer, another is for population test, called the population olfactometer. Both of them consist of an exposure chamber, 8 odour arms, 8 odour chambers and a sample plate or a sample chamber. In the former, the odour chamber is movable for regulating the distance between an odour source and the exposure chamber. In the latter, the sample chamber can be driven up and down to control the predator population under test to be exposed to the exposure chamber at the same time, and the odour chambers are designed for two functions viz., for placing odour sources and for catching the predator reaching them. By means of the NH₄CL smoke tests, it is clear that the odour airflows in both apparatus are separated in the outward area of the exposure chamber and gradually unified around the center to form the combination of the odour fields, from which the predator under test begins searching the odours. The control tests for random distribution in both apparatus have been conducted to provide the evidence that the same odour source in all odour chambers causes the random selection by the predator. The one-odour tests have been executed to prove the sensitivity of both apparatus for testing insect kairomone responses.     

Ecological studies on parasitism ofEretmocerus longipes Compere (Hym., Aphelinidae) on the whitefly,Aleurotuberculatus takahashi David et Subramaniam (Hom., Aleyrodidae) on jasmine in Fuzhou region of the southeastern China

Experiments on host-stage preference, influence of temperature on parasitization, and the feeding niche ofEretmocerus longipes Compere (Hym., Aphelinidae) parasitizingAleurotuberculatus takabashi David et Subramaniam (Hom., Aleyrodidae) on jasmine were conducted both in the laboratory of Institute of Plant Protection, Fujian Academy of Agricultural Sciences and in the field in the Fuzhou region, Fujian Province, PR China. The results showed that the most preferred host-stage ofE. longipes was the 3rd instar ofA. takahashi. The parasitization rate ofE. longipes was significantly affected by temperature, valuing 4.8% at 18 °C, 27.3% at 23 °C, and 55.1% at 33 °C, respectively. The whitefly immature stages and the parasitoid vertically selected all the layers of jasmine plant as their feeding niches, but the whitefly nymph preferred to gather on the top layer, which was considered as its suitable feeding niche, while the parasitoid selected the middle layer as its feeding niche. To measure the ability to utilize spatial resources, the feeding niche breadth was introduced to demonstrate that the parasitoid had the less wide feeding niche breadth among the all stages tested on jasmine, which revealed that the spatial activity for the parasitoid was smaller than that for any stage of the whitefly. The cluster analysis showed that the feeding niche of the parasitoid was more closely related to the 3rd instar than to any other stage of the whitefly. It was suggested that relation between the whitefly and its parasitoid was not only depending on the host-stage preference but also on the feeding niche similarity.     

Functional responses of the parasitoid,Ertmocerus longipes Compere (Hym., Aphelinidae) to densities of the whitefly,Aleurotuberculatus takahashi David et Subramaniam (Hom., Aleyrodidae) at different temperatures

The present study dealt with the functional responses of the parasitoid,Eretmocerus longipes Compere (Hym., Aphelinidae) to the densities of the whitefly,Aleurotuberculatus takahashi David et Subramaniam (Hom., Aleurodidae) at different temperatures under the laboratory conditions. The results showed that when the initial densities ofA. takahashi-3rd instar were raised from 10 to 320 ind./leaf, the numbers of parasitized nymphs increased as well, ranging from 7.0 to 23.1 at 20°C, 9.8 to 42.9 at 25°C, 6.7 to 39.9 at 30°C, and 1.8 to 8.3 ind./leaf at 35°C, respectively. The Holling Disk Equation was introduced to build up the models of functional responses. The response curves remained type II, although the numbers of parasitized nymphs were significantly different under different temperatures. The suitable initial densities of the host whitefly for parasitization were about 80 individuals per leaf. A negative relation was observed between the initial densities of the whitefly and the parasitization rates by the parasitoid. An increase in the initial densities ofA. takahashi-3rd instars ranging from 10 to 320 ind./leaf resulted in a decrease in the parasitization rate byE. longipes ranging from 70.0% to 7.2% at 20°C, 98.0% to 13.4% at 25°C, 67.0% to 12.5% at 30°C and 18.0% to 2.6% at 35°C with a value of 0.2877 was significantly smaller than that at 20°C with a vlaue of 1.3354, that at 25°C with a value of 1.6465 and that at 30°C with a value of 1.1199, respectively (p<0.01). The handling time (Th) forE. longipes was 0.1521 at 35°C, significantly longer than 0.0510 at 20°C, 0.0289 at 25°C and 0.0320 at 30°C, respectively (p<0.01). The maximum loading number (K) of the parasitized nymphs with a value of 34.5 ind./leaf at 25°C was similar to that with a value of 31.2 ind./leaf at 30°C, about 1.8 times as high as that with a value of 19.6 ind./leaf at 20°C and 4 times more than that with a value of 6.6 ind./leaf at 35°C. It was suggested that temperature affected the functional response by balancing searching rate and handling time. The optimal temperature range for the functional responses ofE. longipes to the densities ofA. takahashi-3rd instar was 25° to 30°C.     

Distribution and genetic diversity of Dothistroma septosporum in Pinus brutia forests of south-western Turkey

Dothistroma needle blight (DNB) is a serious disease of the Pinaceae, mainly Pinus species, caused by the fungi Dothistroma septosporum and D. pini. Both species are regarded as invasive forest pathogens worldwide, with rising incidence in central and northern Europe over the last three decades. In this work, 29 sites were investigated between 2013 and 2015 in south-western Turkey. Morphological examination of needles confirmed DNB infection (i.e., Dothistroma conidiospores observed) at 18 sites, and a total of 108 Dothistroma sp. isolates were obtained from 11 of the sites. Host age seemed to be an important factor in both occurrence and severity of DNB in Pinus brutia forests. Continuous rainy days, especially in December, may increase severity of disease; however, extreme rain events may reduce available conidiospores on plant tissues or in the air. Species-specific mating type primers showed that all isolates were D. septosporum; D. pini was not detected. The mating type ratio was close to 1:1, indicating sexual recombination was occurring. Eleven microsatellite markers revealed 59 unique multilocus haplotypes (MLHs) among the 73 isolates originating from different conidiomata. The majority of MLHs were represented by a single isolate (n = 52) and only one MLH was shared between two localities. Analyses showed high genetic diversity, isolation-by-distance, and clear population clusters. These findings suggest that D. septosporum is well established in south-western Turkey and is probably not a recent introduction.