Two G protein oncogenes in human endocrine tumors

Somatic mutations in a subset of growth hormone (GH)-secreting pituitary tumors convert the gene for the alpha polypeptide chain (alpha s) of Gs into a putative oncogene, termed gsp. These mutations, which activate alpha s by inhibiting its guanosine triphosphatase (GTPase) activity, are found in codons for either of two amino acids, each of which is completely conserved in all known G protein alpha chains. The likelihood that similar mutations would activate other G proteins prompted a survey of human tumors for mutations that replace either of these two amino acids in other G protein alpha chain genes. The first gene so far tested, which encodes the alpha chain of Gi2, showed mutations that replaced arginine-179 with either cysteine or histidine in 3 of 11 tumors of the adrenal cortex and 3 of 10 endocrine tumors of the ovary. The mutant alpha i2 gene is a putative oncogene, referred to as gip2. In addition, gsp mutations were found in 18 of 42 GH-secreting pituitary tumors and in an autonomously functioning thyroid adenoma. These findings suggest that human tumors may harbor oncogenic mutations in various G protein alpha chain genes.     

Development of a computerized systems model for health management decision support in growing hogs

A study was designed to provide decision support for health management in growing hogs. A dynamic, stochastic systems model for a confinement, continuous production hog growing enterprise (including nursery, grower and finisher phases) was developed to simulate the economic effects of disease, available floor space and feed additives using farm- specific data. Modeling techniques included: discrete and distributed (continuous) delays; triangular probability density functions; autocorrelation; table look-up functions; an alpha-beta tracker; non-linear, constrained optimization. The model was designed to be initialized with the system's current status, using an accompanying production/financial database to achieve individual-farm specificity. Initialization of rate variables required ‘reverse optimization’ of historical system performance. Model predictions are based on an adjustment approach, where changes in current performance are dictated by changes in disease rates, available floor space and feed additive use. These effects vary randomly, but are autocorrelated between production phases, between similar diseases and over time.     

Accumulation of cadmium in growing peanut (Arachis hypogaea L.) seedlings—Its effect on lipid peroxidation and on the antioxidative enzymes catalase and guaiacol peroxidase

In plants exposed to high metal concentrations, mechanisms to counteract the oxidative burst are crucial for its survival. To investigate the temporal sequence of physiological reactions of peanut seedlings (Arachis hypogaea L.) to cadmium exposure, seeds were cultured in increasing concentrations of CdCl₂, ranging from 50 to 300 μM. Germination frequency was scored, and the distributions of Cd in root, stem, and leaves were determined after 2 and 4 weeks of culture. Lipid peroxidation and activities of antioxidative enzymes including catalase (CAT; EC 1.11.1.6) and guaiacol peroxidase (GPX; EC 1.11.1.7) were estimated in these three parts of the plant. Germination of seedlings was not affected, but the growth of seedlings was severely suppressed with increasing concentrations of CdCl₂ and incubation period. Pattern of Cd distribution in the three organs varied with concentration and period of exposure to Cd. Increased lipid peroxidation was detected in all parts of the developing seedlings with increasing metal accumulation. Catalase and guaiacol peroxidase activity varied in the three parts of the seedlings with concentration of Cd and incubation period. Guaiacol peroxidase activity appears to be more active in scavenging the reactive oxygen species in developing peanut seedlings. The results of the present experiment demonstrate the advantages of a tissue‐culture model system in studying the complex network of interactions of various factors in stress tolerance.     

Effects of extraction methods on phenolic contents and antioxidant activity in aerial parts of Potentilla atrosanguinea Lodd. and quantification of its phenolic constituents by RP-HPLC

The effects of different solvent systems (methanol, ethanol, acetone, and their 50% aqueous concentrations) and extraction procedures (microwave, ultrasound, Soxhlet and maceration) on the antioxidant activity of aerial parts of Potentilla atrosanguinea were investigated by three different bioassays: 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) diammonium salt (ABTS), 2,2'-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging assays and ferric reducing antioxidant potential (FRAP). The 50% aqueous ethanol extracts exhibited strong antioxidant activity measured in terms of Trolox equivalent antioxidant capacity (TEAC) [(54.34 to 122.96, 29.82 to 101.22 and 13.64 to 41.43) mg of Trolox/g] with ABTS (*+), DPPH (*) and FRAP assays, respectively. In general, TEAC of Soxhlet extracts was found to be 1.8 and 3 times higher than ultrasound and maceration but slightly (1.2 times) higher than microwave. A positive correlation (r(2) = 0.931 to 0.982) was observed between total polyphenol (TPC) and total flavonoid (TFC) contents which ranged between 26.7 to 30.7 mg/g gallic acid equivalent and 16.8 to 20.8 mg/g quercetin equivalent respectively, with antioxidant activity. In addition, some of its bioactive phenolic constituents which contribute largely toward antioxidant potential such as chlorogenic acid, catechin, caffeic acid, p-coumaric acid and quercetin were also quantified in different extracts by RP-HPLC.     

Pollination-induced oxidative stress in floral organs of Cymbidium pendulum (Roxb.) Sw. and Cymbidium aloifolium (L.) Sw. (Orchidaceae): A biochemical investigation

A perusal of literature showed that a little is known about the metabolic changes related to senescence in orchid flowers. It was observed that unpollinated flowers of Cymbidium pendulum (Roxb.) Sw. remained fresh for 20 days and senesced within 8 days after pollination (DAP), while that of Cymbidium aloifolium (L.) Sw. took 18 days when unpollinated but showed senescence in 7 DAP. A higher level of electrolyte leakage was recorded in all the floral organs of pollinated flowers in both the species. There was a concomitant increase in levels of malondialdehyde (MDA) and hydrogen peroxide (H₂O₂); indicators of oxidative damage, in all the organs for both the species. Ascorbic acid, on the other hand, decreased significantly. Higher amount of electrolyte leakage, MDA and H₂O₂ content were recorded in C. pendulum as compared of the other species while the ascorbic acid, on the other hand, was observed to be decreased and this decrease was more in C. pendulum than C. aloifolium suggesting a higher oxidative damage to the floral organs in the former species than the latter. TIBA, i.e. tri-iodobenzoic acid (an auxin inhibitor; 0.25 μM) and silver nitrate (ethylene inhibitor; 0.25 μM) application to pollinated flowers partially prevented the elevation of oxidative damage and consequently senescence suggesting the involvement of these hormones in governing these changes in orchid flowers. Comparatively, AgNO₃ was more effective than TIBA in delaying senescence.     

Microbial Diversity and Bioactive Substances in Disease Suppressive Composts from India

The present study aimed to investigate microbial communities in seven Indian composts and their potential for biocontrol of Fusarium oxysporum f. sp. lycopersici. In addition, identification of bioactive substances in disease suppressive composts was also attempted. Composts were chosen based on disease suppressiveness and subjected to molecular microbial analyses. Total genomic DNA from the composts was extracted and amplified with polymerase chain reaction using primers targeting the 18S rRNA and 16S rRNA genes of fungi and bacteria, respectively. Denaturing gradient gel electrophoresis (DGGE) fingerprinting and DNA sequencing were used to identify the fungal and bacterial targets. Phylogenetic analysis of the fungal 18S rRNA ITS gene sequences showed that phylum Ascomycota was dominant in all composts, while in the bacterial 16S rRNA gene sequences, the phylum Proteobacteria was dominant. Some fungi in disease suppressive composts grouped phylogenetically close to F. oxysporum. Bacterial sequences with close similarity (>95% identity) with Actinobacterium showed a strong presence only in disease suppressive composts. Disease suppressive composts formed a separate group in the cluster analysis of 18S rRNA ITS and 16S rRNA gene sequences. Gas chromatography-time of flight-mass spectrometry was performed with compost extracts to determine if bioactive substances were present in disease suppressive composts. The analysis of compost organic matter showed a negative association of disease suppressiveness with phloroglucinol, sitosterol, and monoenoic fatty acid, while cholesterol and certain organic acids were positively associated with suppressiveness.     

Effect of CIPC on Sprout Inhibition and Processing Quality of Potatoes Stored Under Traditional Storage Systems in India

Indigenous non-refrigerated methods like heaps and pits are used in India for short-term storage of potatoes (Solanum tuberosum L.) to avoid distress sale. Storing untreated potatoes generally results in high losses from sprouting, moisture loss and rotting. To reduce storage losses by inhibition of sprouting and to determine the suitability of stored potatoes for processing into crisps, a single spray application of a commercial formulation of 3-chlorophenyl carbamate (CIPC or chlorpropham) 50% a.i., (Oorja, United Phosphorus Limited, Mumbai, India) of CIPC (or chlorpropham) was tested on potatoes during storage from March to June under two traditional storage methods [heap (17–33 °C, 58–92% relative humidity (RH)) and pit (17–27 °C, 72–95% RH)] in 2 years [2005 up to 90 days of storage (DOS) and 2006 up to 105 DOS], using four cultivars and two rates of CIPC application (20 and 30 mg a.i. kg⁻¹ tubers). The two rates of application were comparably effective in reducing weight losses, sprouting and sprout growth in stored tubers, and the effect was more pronounced in pit storage than in heap storage. By contrast to untreated tubers, CIPC-treated potatoes remained turgid under the two storage methods and fetched market prices comparable to those for cold-stored (2–4 °C) potatoes after 105 days of storage. Reducing sugar concentrations in treated potatoes decreased during storage especially in 2006 when the initial reducing sugar concentration was higher than in 2005. Crisp colour improved only in 2005 after 90 DOS, but it deteriorated in 2006 during storage up to 105 DOS. Sucrose concentration increased tremendously during storage in 2 years. Only one cultivar (Kufri Chipsona-1) with low initial reducing sugar concentration and less sucrose accumulation during storage could produce acceptable colour crisps after storage in both years. The remaining three cultivars—with high initial reducing sugar concentration—were suitable for processing after storage in heap and pit in 2005, but not in 2006. Stored potatoes were safe for human consumption as the CIPC residue concentrations were far below the permissible level of 10 mg kg⁻¹ as prescribed by the European Union. Single spray application of CIPC (20 mg kg⁻¹ treatment) can effectively reduce storage losses in potatoes stored in traditional non-refrigerated methods of heap and pit and extend the storage life by 90 to 105 days.     

High level of resistance to Sclerotinia sclerotiorum in introgression lines derived from hybridization between wild crucifers and the crop Brassica species B. napus and B. juncea

Sclerotinia rot caused by the fungus Sclerotinia sclerotiorum is one of the most serious and damaging diseases of oilseed rape and there is keen worldwide interest to identify Brassica genotypes with resistance to this pathogen. Complete resistance against this pathogen has not been reported in the field, with only partial resistance being observed in some Brassica genotypes. Introgression lines were developed following hybridization of three wild crucifers (viz. Erucastrum cardaminoides, Diplotaxis tenuisiliqua and E. abyssinicum) with B. napus or B. juncea. Their resistance responses were characterized by using a stem inoculation test. Seed of 54 lines of B. napus and B. juncea obtained from Australia, India and China through an Australian Centre for International Agricultural Research (ACIAR) collaboration programme were used as susceptible check comparisons. Introgression lines derived from E. cardaminoides, D. tenuisiliqua and E. abyssinicum had much higher levels (P < 0.001) of resistance compared with the ACIAR germplasm. Median values of stem lesion length of introgression lines derived from the wild species were 1.2, 1.7 and 2.0 cm, respectively, as compared with the ACIAR germplasm where the median value for stem lesion length was 8.7 cm. This is the first report of high levels of resistance against S. sclerotiorum in introgression lines derived from E. cardaminoides, D. tenuisiliqua and E. abyssinicum. The novel sources of resistance identified in this study are a highly valuable resource that can be used in oilseed Brassica breeding programmes to enhance resistance in future B. napus and B. juncea cultivars against Sclerotinia stem rot.