DNA profiling and genetic diversity of Korean soybean (<Emphasis Type="Italic">Glycine max</Emphasis> (L.) Merrill) landraces by SSR markers

Approximately 7,000 accessions of Korean soybean (Glycine max (L.) Merrill) landraces, largely composed of three collections, the Korea Atomic Energy Research Institute’s soybean (KAS), the Korean Crop Experiment Station’s soybean (KLS) and the Korean Agricultural Development and Technology Center’s soybean (KADTC) collections, have been conserved at the Rural Development Administration (RDA) genebank in Korea. The accessions within collections were classified based on their traditional uses such as sauce soybean (SA), sprouted soybean (SP), soybean for cooking with rice (SCR), and OTHERS. A total of 2,758 accessions of Korean soybean landraces were used to profile and to evaluate genetic structure using six SSR loci. A total of 110 alleles were revealed by at the six SSR loci. The number of alleles per SSR locus ranged from 9 to 39 in Satt187 and Satt_074, respectively. The number of alleles ranged from 87 in the KADTC collection to 96 in the KLS collection, and from 63 in the SCR group to 95 in the SP group. Nei’s average genetic diversity ranged from 0.68 to 0.70 across three collections, and 0.64 to 0.69 across the usage groups. The average between-group differentiation (G _st) was 0.9 among collections, and 4.1 among the usage groups. The similar average diversity among three collections implies that the genetic background of the three collections was quite similar or that there were a large number of duplicate accessions in three collections. The selection from the four groups classified based upon usage may be a useful way to select accessions for developing a Korean soybean landrace core collection at the RDA genebank. DNA profile information of accessions will provide indications of redundancies or omissions and aid in managing the soybean collection held at the RDA genebank. The information on diversity analysis could help to enlarge the genetic diversity of materials in breeding programs and could be used to develop a core collection.     

Aortic rupture causing cardiac tamponade in a 24‐day‐old Friesian colt with concurrent colonic Chlamydiosis and Balantidiasis

A 24‐day‐old Friesian colt died suddenly and a physical examination the morning the foal died showed no abnormalities and serum IgG levels >8.0 g/l. Necropsy examination revealed haemopericardium and a 2 cm transverse tear at the root of the aorta. The foal was also found to have Chlamydophila spp. in the epithelium and Balantidium coli on the mucosal surface of the large colon. An aortic rupture is a novel finding in a foal, colonic Chlamydiosis has not been previously reported in horses and Balantidium coli has not been reported in equids in North America.     

Responses of native legume desert trees used for reforestation in the Sonoran Desert to plant growth-promoting microorganisms in screen house

Three slow-growing legume trees used for desert reforestation and urban gardening in the Sonoran Desert of Northwestern Mexico and the Southwestern USA were evaluated whether their growth can be promoted by inoculation with plant growth-promoting bacteria (Azospirillum brasilense and Bacillus pumilus), unidentified arbuscular mycorrhizal (AM) fungi (mainly Glomus sp.), and supplementation with common compost under regular screenhouse cultivation common to these trees in nurseries. Mesquite amargo (Prosopis articulata) and yellow palo verde (Parkinsonia microphylla) had different positive responses to several of the parameters tested while blue palo verde (Parkinsonia florida) did not respond. Survival of all tree species was over 80% and survival of mesquite was almost 100% after 10 months of cultivation. Inoculation with growth-promoting microorganisms induced significant effects on the leaf gas exchange of these trees, measured as transpiration and diffusive resistance, when these trees were cultivated without water restrictions.     

The role of CITES in the conservation of marine fishes subject to international trade

All possible tools need to be marshalled for marine fish conservation. Yet controversy has swirled around what role, if any, the Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) should play for marine fishes. This paper analyses the relevance and applicability of CITES as a complementary tool for fisheries management. CITES currently regulates the international trade of very few marine fish species, by listing them in its Appendices. After the first meeting of the Parties (member countries) in 1976, no new marine fish taxa were added to the CITES Appendices until 2002, when Parties agreed to act to ensure sustainable and legal international trade in seahorses (Hippocampus spp.) and two species of sharks. Progress has continued haltingly, adding only one more shark, humphead wrasse (Cheilinus undulatus) and sawfishes by 2012. Parties voice concerns that may include inadequate data, applicability of CITES listing criteria, roles of national fisheries agencies, enforcement challenges, CITES' lack of experience with marine fishes, and/or identification and by‐catch problems. A common query is the relationship between CITES and other international agreements. Yet all these arguments can be countered, revealing CITES to be a relevant and appropriate instrument for promoting sound marine fisheries management. In reality, Parties that cannot implement CITES effectively for marine fishes will also need help to manage their fisheries sustainably. CITES action complements and supports other international fisheries management measures. As CITES engages with more marine fish listings, there will be greater scope to analyse its effectiveness in supporting different taxa in different contexts.     

Spatial Modeling of Tropical Deforestation Using Socioeconomic and Biophysical Data

Tropical forests are disappearing at an alarming rate. In Central America, a hectare of forest is cleared for agriculture every 5 min. This study was conducted in a forested 4,000 ha watershed of central Honduras to find deforestation causes based on socio-economic characteristics of population. First, a multitemporal analysis of Landsat TM imagery was conducted to determine deforestation rates and agricultural–forest boundaries. A GIS buffer procedure allowed determining which households were at the deforestation front and which households were located at the rest of the area (control). GIS techniques were used to extract biophysical information such as slope, elevation, land cover, temperature, precipitation, etc. Then, we set up a data base with more than 50 socioeconomic variables (level of education, income, children per family, major economic activity, use of conservation practices, etc.). Around 500 households, distributed all over the watershed, were visited, interviewed and GPS-located. A multivariate statistical analysis allowed an exploratory analysis to eliminate non useful and redundant variables and then to determine what variables appear to be important predictors of deforestation behavior among rural families. A resulting logistic regression model showed that household with lower annual income heads and with less use of conservation practices were more statistically prone to clear the forest (α = 0.001). The study uncovered the complexity of this problem and confirmed the need of using GIS–remote sensing techniques to combine socioeconomic and environmental data in several time–space dimensions to find the causes and trends of tropical deforestation.     

Comparing apparent electrical conductivity measurements on a paddy field under flooded and drained conditions

Every growing season, paddy fields are kept both flooded and drained for a significant period of time. As a consequence, these soils develop distinct physico-chemical characteristics. For practical reasons, these soils are mostly sampled under dry conditions, but the question arises how representative the results are for the wet growing conditions. Therefore, the apparent electrical conductivity (EC_a) of a 1.4 ha alluvial paddy field located in the Brahmaputra floodplain of Bangladesh was measured in both dry and wet conditions by a sensing system using the electromagnetic induction sensor EM38, which does not require physical contact with the soil, and compared both surveys. Due to the smooth water surface under wet conditions which ensured increased stability of the sensing platform, the results of the survey showed considerably reduced micro-scale variability of EC_a. Furthermore, the wet survey results more reliably furnished soil-related information mainly due to the absence of soil moisture dynamics. The differences between EC_a under wet and dry conditions were attributed to differences in soil texture, mainly the sand content variation having considerable effect on soil moisture differences when flooded following drainage. Accordingly, the largest differences between EC_a under wet and dry conditions were found in those parts of the field with a large sand content. Hence, the conclusion was that an EC_a survey on flooded fields has an added value to precision soil management.     

Liberalization of Peru's formal seed sector

During the 1990s, the Government of Peru began to aggressivelyprivatize agriculture. The government stopped loaning money to farmers' cooperatives and closed the government rice-buying company. The government even rented out most of its researchstations and many senior scientists lost their jobs. As part of this trend, the government eliminated its seed certification agency. Instead, private seed certification committees were set up with USAID funding and technical advise from a US university. The committees were supposed to become self-financing (bycertifying seed grown by small seed producers) and each committee was supposed to encourage the development of a group of small seed-producing firms, clustered around the seedcertification agency. The amazing thing is that many of the seed committees actually accomplished these goals. The agronomists who staffed the committees stood by their jobs,even after US funding ended, even though the committees' income was (at best) modest, and occasionally under the threat of violence from the extreme left. Some seed certificationcommittees failed and others did not. Some of the problems with Peruvian agricultural liberalization can be seen in regard to the seed programs of maize, rice, potatoes, and beans. For example, the government abandoned most research, yet could not resist creating certain distortions in the seed market (e.g.,buying large amounts of seed and distributing them for political ends).     

Strategies and priorities in field collections for ex situ conservation: the case of the Israel Plant Gene Bank

The ex situ collection of the Israel Plant Gene Bank (IGB) aims to encompass the rich local flora and its genetic diversity with an emphasis on crop wild relatives. However, to properly establish a core collection, collection efforts must be prioritized and strategized. We previously classified local plant genetic resources into four priority groups that assisted in strategizing the collection activities. The following years of intensive collection activity yielded over 4200 banked accessions. However, these do not necessarily represent the distribution range of the target species for collection (TSC) and consequently, their genetic diversity. To best cover the latter, the collecting area was divided into botanical districts and the magnitude of the collection was determined according to prioritization group, e.g., a wild relative of an agricultural crop with a vast distribution range should be represented by a larger number of banked accessions than one with a smaller range. Continuous evaluation of specific needs shapes the collection scheme of the IGB to maximize collection efforts, better represent the presumed genetic diversity of TSC, and establish its core collection.     

The performance of community organisers in promotion of community forestry in Leyte Province,Philippines

A study was conducted to assess the role and effectiveness of community organisers in supporting the development of people’s organisations in achieving community-based forest management objectives in Leyte Province Philippines. Community organisers were found to be effective in forming people’s organisations (POs), motivating people to participate in voluntary activities organised by POs and encouraging cohesiveness among PO members. Community organisers manage to raise the level of environmental awareness and knowledge of members of people’s organisations, develop leadership interest and skills, create various livelihood opportunities and provide direction and facilitate the establishment of large tree plantations. However, the short duration of community organisers’ contracts (typically two years) is insufficient to establish mature and cohesive POs prepared to assume management on their own, including the management of tree plantations. Further, lack of training and funding support, low wages, delayed payment of salaries and limited time to work with people’s organisations, as well as the pressure to produce tangible outputs such the establishment of large tree plantations, prevents them from placing greater emphasis on the development and empowerment of the people.     

Farmers perception of pesticide use and genetic erosion of landraces of tetraploid wheat (<Emphasis Type="Italic">Triticum</Emphasis> spp.) in Ethiopia

Perception of farmers’ about the use of pesticides and genetic erosion of tetraploid wheat landraces of Ethiopia was assessed through focus group discussions with farmers, on-farm observations, personal interviews with farmers, by using structured questionnaires of temporal and spatial methods. A total of 1496 farmers from seven provinces in the country were interviewed. Farmers’ knowledge about pesticide increases suggests that they are not happy on using chemicals because of their negative impact on farm land. About 75 % of the farmers believe that, although the use of pesticides may increase the production of wheat, it has a negative impact on (human) health and environment. Women showed a higher concern for pesticides’ harmfulness than men. Farmers’ valuation of genetic erosion was estimated as reduced importance of landraces, as shown by a the lower proportion of landraces either grown or sold on the market. The four most important factors cited for loss of landraces were reduction in land area per capita, displacement by released/modern varieties of hexaploid wheat and teff, reduced benefit from landraces, and displacement by other crops and chat. Genetic erosion of 100 % was observed for Triticum dicoccon in the provinces of Gojam and Gonder and for T. polonicum in Tigray and Gojam. Overall, genetic erosion in the country was 32.0, 35.3, 55.9, 84.4 and 84.4 % for T. durum Desf., T. turgidum L., T. aethiopicum Jakubz., T. polonicum L. and T. dicoccon Schrank, respectively.