Assessing Allelopathic Index for Estimating Allelopathic potential of Ajowan Extracts

Allelopathy is a procedure in which secondary metabolites are produced by plants. Some plants may beneficially or antagonistically affect other plants through allelochemical compounds which may be released directly or indirectly from live or dead parts and cause allelopathic and phytotoxic effects. The aim of the present study was to investigate the allelopathic possibility of ajowan (Carum copticum) extracts in different concentrations on morphological indices (germination and growth) of wheat (Triticum sativum), barley (Hurdeum vulgare), corn (Zea maize S.C 704), and safflower (Carthamus tinctorius L.) seedlings as proceeding crops and to develop a comprehensive formula for measuring the negative and positive effects of allelochemicals on growth indices such as shoot and root length, as well as the germination percentage on donor plants. It was demonstrated that increasing concentrations of ajowan extracts significantly decreased the Allelopathic Index, percent of germination, and other growth related indices of all seedlings. Based on the proposed Allelopathic Index of experimental plants, it was revealed that ajowan has posed a higher risk to corn and barley especially at the early stages of the growing cycle, while safflower and wheat indicated more tolerance to growth inhibition effects of ajowan in rotational sequence.     

Comparative Studies on the Role of Organic Biostimulant in Resistant and Susceptible Cultivars of Rice Grown under Saline Stress - Organic Biostimulant Alleviate Saline Stress in Tolerant and Susceptible Cultivars of Rice

Plants are sessile organisms that experience various abiotic stresses during their lifespan and try to adapt to these environmental stresses by manipulating their physiological, biochemical, cellular, and molecular mechanisms. Salinity is one of the important abiotic stress that affects the metabolism and physiology of plant cells that leads to serious damage to crops and productivity. We investigated the response of two contrasting (salt susceptible and tolerant) cultivars during saline stress by modulating its effect with the application of an important natural biostimulant panchagavya (PG). The results showed that the salinity stress greatly influenced and negatively affects the plant growth, biochemical attributes, and induces the expression of various genes in both cultivars. Furthermore, we assessed the effect of PG alone and by amending with NaCl to alleviate the saline stress which showed a significant enhancement of biochemical and physiological characteristics in both cultivars. Furthermore, we assessed the response of seven autophagy associated gene (ATG1, ATG3, ATG4, ATG6, ATG7, ATG8, and ATG9), BAX Inhibitor -1 (BI-1), Mitogen activated Protein Kinase–1 (MAPK-1), WRKY53, Catalase -1 (CAT-1), Superoxide Dismutase (SOD), and Glutathione Peroxidase (GPX) genes in rice that displayed the differential expression pattern during saline stress in both cultivars. We concluded that saline stress can be manipulated by the application of PG and positively regulate the physiological, biochemical, and gene expression response in salt-susceptible and -tolerant rice cultivars. Furthermore, the current study also suggested that salinity is a mutifactorial and multigenic response. Autophagy and programmed cell death regulated along with salinity and was helpful in adapting the tolerance against the stress condition.     

Cytotoxic Effect on Human Cancer Cells and Antioxidant Activity of Extracts of <Emphasis Type="Italic">Codonopsis lanceolata</Emphasis> Root using Different Solvent Fractions

This study was conducted to investigate cytotoxic effect, phenolic content, DPPH, ABTS radical scavenging rate and nitrite scavenging rate from different solvent fractions of Codonopsis lanceolate root. At all extracts concentration, the cytotoxic effect on different fractions against human cancer cells was higher in n-hexane and butyl alcohol fractions than in the other fractions. The IC₅₀ value on HeLa cell showed the lowest by 62.70 μg.mL^-1 on n-hexane fraction, and exhibited the values of butyl alcohol fraction 341.36 μg.mL^-1, methylene chloride 598.33 μg.mL^-1, ethyl acetate fraction 860.44 μg.mL^-1, DW fraction 2896.82 μg.mL^-1. Total polyphenol content on different solvent fractions varied from 102.43 to 153.52 mg.g^-1, and that of ethyl acetate fraction showed the highest amount. The DPPH and ABTS radical scavenging activity showed that the increase was proportional to the concentration, and the scavenging activity also showed the highest in ethyl acetate fraction. The nitrite scavenging activity of each fraction at pH 1.2 was in the order of EA > BA > MC > n-H > DW, and the lower the acidity, the higher nitrite scavenging activity, and there was no distinct detection of nitrite scavenging effects of the pH range 6.0. The results of this study suggested that the extract of Codonopsis lanceolate root may assist in the potential biological activities, and it was found that the activity was different depending on the organic solvent fraction and the water fraction.     

Phenotypic Variation in a Germplasm Collection of Pepper (<Emphasis Type="Italic">Capsicum chinense</Emphasis> Jacq.) from Korea

A total of 47 core collections of pepper (Capsicum chinense Jacq.) conserved in National Agrobiodiversity Center (NAC) were studied under field condition at Jeonju over two consecutive years (2015 and 2016). All accessions were characterized for their 14 qualitative and 16 quantitative characters. Results revealed that both qualitative and quantitative characters exhibited wide variation among the studied germplasm. Distribution of fruit characters (fruit length, width, and fruit wall thickness) among the accessions was positively skewed. Of the 47 accessions evaluated, 38.3% accessions had conical shaped fruits and mature fruit color was predominantly red (51.1%), orange (21.3%) and yellow (14.9%). Principal component analyses revealed that (i) 56.64% of the qualitative (fruit shape, color and fruit surface) variation and (ii) 89.42% of the quantitative (plant width, height and fruit maturity days) variation were explained by the first two components. Clustering revealed two groups and dendrogram revealed morphological variation among accessions. The phenotypic diversity exists in this core collections provide valuable information to improve agronomic traits in pepper breeding program.     

Climate change impact on corn suitability in Isabela province,Philippines

Climate change is expected to affect agricultural crop production in the Philippines. Several studies were already done to quantify the effect of climate change on agricultural crop production in the country. Most of these studies focus only on the effect of climate change on crop yield. This study estimated the effect of climate change on the area (suitable area) for corn production. Using the Land Use Suitability Evaluation Tool (LUSET), change in corn suitability in the province of Isabela was estimated for the years 2050, 2060, and 2070. Based on the results, climate change will negatively impact corn suitability in the province. Decreasing trend in corn suitability rating was observed due to increasing temperature resulting to loss of highly suitable areas for corn production. For example, during the first cropping season the estimated average decreases in suitability scores due to an increase in temperature were 6.7, 11.4, and 20.7% in the years 2050, 2060, and 2070, respectively. These decreases in suitability resulted in the loss of 6,777 ha highly suitable areas for corn production.     

Characterization of donor genome contents of backcross progenies detected by SSR markers in rice

Backcrossing is a trait introgression method of renewed importance in crops. The evolution of introgressed or substituted segments through backcross generations has been analyzed theoretically using simulations. In this study, the content of donor genomes, including donor segment number (DSN), donor segment length (DSL), and donor genome size (DGS), were directly analyzed in six crosses over three successive backcrosses using a set of single sequence repeat (SSR) markers covering the entire rice genome. The results of this analysis demonstrated that the average DSN in each genome was 8.39 in BC₂F₁, 4.13 in BC₃F₁, and 2.41 in BC₄F₁, decreasing nearly by half with each backcrossing. The average DSL was 33.43 cM (centiMorgans) in BC₂F₁, 29.04 cM in BC₃F₁, and 25.07 cM in BC₄F₁, display a progressive decrease slightly greater than 10% in each additional backcross generation. Meanwhile the average DGS was 280.51 cM in BC₂F₁, 119.97 cM in BC₃F₁, and 60.53 cM in BC₄F₁, decreasing 57.2% from BC₂F₁ to BC₃F₁ and 50.4% from BC₃F₁ to BC₄F₁. This revealed that the reduction in DGS was approximately 50% with each backcrossing. These results provide a guide for introgression or substitution of target chromosome segments from donors into recipients in backcross programs. Zhang-Ying Xi and Feng-Hua He contributed equally to this work.     

Geographical patterns of phenotypic diversity in <Emphasis Type="Italic">Oryza sativa</Emphasis> landraces of Côte d’Ivoire

The knowledge of agro-morphological diversity and the distribution pattern of variation among conserved accessions could be an invaluable aid in germplasm management and crop improvement strategies. In this study, the geographical pattern of morphological variation of 880 landrace rice (Oryza sativa (L.)) accessions in Côte d’Ivoire was evaluated for 13 agro-morphological characters. Shannon –weaver diversity index indicated an overall mean of 0.47 ± 0.07 in the collection, with the greatest diversity from derived Savanna and north-west (H′ = 0.52 and 0.50) while the west-central had the lowest diversity (H′ = 0.41). Canonical discriminant analysis showed that traits such as panicle length, grain size (weight and length), tillering ability, number of days to heading and maturity were the main discriminatory characteristics. Result of the phenotypic frequency shows that, the landraces from the north and north-western zones were mostly tall, early heading and maturity, compared to those from the west and west-central which were mainly dwarf to medium height, late heading and maturing. This differential distribution of landraces with height, heading and maturity period reflected the distribution pattern of different Oryza sativa landraces in Côte d’Ivoire, which could be useful in germplasm management and breeding programs.     

The Panama Tall and the Maypan hybrid coconut in Jamaica: did genetic contamination cause a loss of resistance to Lethal Yellowing?

We applied Bayesian population assignment methods to assess the trueness to type of four populations of the coconut cultivar Panama Tall (PNT) located in Jamaica and found that two of them presented a high percentage of off-types, while genetic contamination was low in the two others. The PNT is the pollen parent of the MAYPAN hybrid, which used to be planted in Jamaica to control an epidemic disease: Lethal Yellowing. The main source of contamination was the susceptible Jamaica Tall, thus increasing the susceptibility in the resulting MAYPAN progeny. The incidence of genetic contamination seems however to be insufficient to be the only cause of the latest outbreak of the disease. Neither the MAYPAN nor its parents can be said resistant in the present context of Jamaica.     

Double haploids,markers and QTL analysis in vegetable brassicas

Double haploid (DH) plants of Brassica spp. can be produced via anther culture or culture of microspores. This paper reviews the uses of double haploids in crop improvement research in vegetable brassicas (B. oleracea). Applications of DH lines are described for breeding; construction of linkage maps; genetic analysis of quantitative traits and capturing genetic variation. The advantages and disadvantages of DH lines are discussed     

Genetic variation in F<Subscript>2</Subscript> populations and their potential in the improvement of grain yield in tef (<Emphasis Type="Italic">Eragrostis tef</Emphasis>)

Tef is a staple cereal of Ethiopia in high demand by consumers. In order to cope up with this high consumer demand, productivity per unit of land must increase through the development and use of high-yielding varieties. To this effect, the National Tef Research Project has long been striving towards the development of high yielding varieties through direct selection from germplasm and concentrating favourable alleles through hybridization and selection, despite the tedious crossing technique. The objective of this study was to assess the degree of genetic variation in F₂ populations of tef as a basis for improving grain yield. F₂ populations from 12 crosses and their parents were grown at the Debre Zeit Agricultural Research Center, Ethiopia, and assessment was made on eight traits on individual plant basis. Eleven of the 12 crosses showed substantial genetic variation for grain yield and its components, indicating the potential for improvement through selection. Moreover, grain yield, plant weight and yield related traits showed moderate to high heritability values (17–80%). In all the crosses, tiller number, panicle weight, yield per panicle and panicle length showed significant (P ≤ 0.05) and positive association with grain yield. Considering the degree of genetic variation and heritability values, emphasis should be given to selected crosses in an effort to developing high-yielding tef varieties.