Modelling growth and body composition in fish nutrition: where have we been and where are we going?

Mathematical models in fish nutrition have proven indispensable in estimating growth and feed requirements. Nowadays, reducing the environmental footprint and improving product quality of fish culture operations are of increasing interest. This review starts by examining simple models applied to describe/predict fish growth profiles and progresses towards more comprehensive concepts based on bioenergetics and nutrient metabolism. Simple growth models often lack biological interpretation and overlook fundamental properties of fish (e.g. ectothermy, indeterminate growth). In addition, these models disregard possible variations in growth trajectory across life stages. Bioenergetic models have served to predict not only fish growth but also feed requirements and waste outputs from fish culture operations. However, bioenergetics is a concept based on energy-yielding equivalence of chemicals and has significant limitations. Nutrient-based models have been introduced into the fish nutrition literature over the last two decades and stand as a more biologically sound alternative to bioenergetic models. More mechanistic models are required to expand current understanding about growth targets and nutrient utilization for biomass gain. Finally, existing models need to be adapted further to address effectively concerns regarding sustainability, product quality and body traits.     

Algal Lectins as Potential HIV Microbicide Candidates

The development and use of topical microbicides potentially offers an additional strategy to reduce the spread of the Human Immunodeficiency Virus (HIV). Carbohydrate-binding agents (CBAs) that show specificity for high mannose carbohydrates on the surface of the heavily glycosylated envelope of HIV are endowed with potent anti-HIV activity. In fact, a number of algal lectins such as cyanovirin-N, microvirin, microcystis viridis lectin, scytovirin, Oscillatoria agardhii agglutinin and griffithsin are considered as potential microbicide candidates to prevent the sexual transmission of HIV through topical applications. They not only inhibit infection of cells by cell-free virus but they can also efficiently prevent virus transmission from virus-infected cells to uninfected CD4(+) target T-lymphocytes and DC-SIGN-directed capture of HIV-1 and transmission to CD4(+) T lymphocytes. This review focuses on the structural properties and carbohydrate specificity of these algal lectins, their antiviral activity against HIV and several other enveloped viruses, their safety profile and viral resistance patterns.     

CD86 molecule is a specific marker for canine monocyte-derived dendritic cells

In this study, canine monocyte-derived dendritic cells (cMo-DC) were produced in presence of canine GM-CSF (cGM-CSF) and canine IL-4 (cIL-4), and they were characterized by their dendritic morphology, MLR functionality and phenotype. We noticed that cMo-DC were labelled with three anti-human CD86 (FUN-1, BU63 and IT2.2 clones), whereas resting and activated lymphocytes or monocytes were not stained. CD86 expression was induced by cIL-4 and was up-regulated during the differentiation of the cMo-DC, with a maximum at day 7. Furthermore, cMo-DC were very potent even in low numbers as stimulator cells in allogeneic MLR, and BU63 mAb was able to completely block the cMo-DC-induced proliferation in MLR. We also observed that cMo-DC highly expressed MHC Class II and CD32, but we failed to determine their maturation state since the lack of commercially available canine markers. Moreover, cMo-DC contained cytoplasmic periodic microstructures, potentially new ultrastructural markers of canine DC recently described. In conclusion, this work demonstrates that the CD86 costimulatory marker is now usable for a better characterization of in vitro canine DC.     

BMC ecology image competition 2017: the winning images

For the fifth year, BMC Ecology is proud to present the winning images from our annual image competition. The 2017 edition received entries by talented shutterbug-ecologists from across the world, showcasing research that is increasing our understanding of ecosystems worldwide and the beauty and diversity of life on our planet. In this editorial we showcase the winning images, as chosen by our Editorial Board and guest judge Chris Darimont, as well as our selection of highly commended images. Enjoy!     

Effect of organic manure and the endogeic earthworm Pontoscolex corethrurus (Oligochaeta: Glossoscolecidae) on soil fertility and bean production

A biofertilisation assay was conducted in Maripasoula (French Guiana), testing the effects of three different organic amendments (manioc peels, sawdust and wood charcoal) and the inoculation of the endogeic earthworm Pontoscolex corethrurus on pod production of Vigna unguiculata sesquipedalis and on soil chemical properties (pH, C, N, total and exchangeable P and K). Pod production was highest with manioc peels as available P increased in the soil. Wood charcoal also had a beneficial effect on pod production as it decreased acidity and increased the C:N ratio in the soil. In sawdust-amended soil, pod production did not differ from that in unamended soil. Inoculation of earthworms at a density of 80 sub-adults m^-2 did not significantly affect either pod production or soil nutrient content directly, although it increased the positive effect of manioc peels on pod production. Soil nutrient content, pod production and earthworm density at the end of the experiment were negatively correlated with soil moisture and positively with each other. Despite the strong effect of moisture, this assay demonstrated an interaction between the earthworm P. corethrurus and the legume V. unguiculata sesquipedalis mediated by soil nutrient content and organic matter inputs. We conclude that manioc peels improved soil P availability and were an interesting amendment for legume crops. We discuss also the effect of earthworm inoculation.     

Carbon stable isotope fractionation and trophic transfer of fatty acids in fungal based soil food chains

Stable isotope analysis has been used as a powerful tool in food web studies in terrestrial ecosystems. In addition the occurrence and abundance of fatty acids may serve as indicator for feeding strategies of soil animals. Here we combine both approaches and investigate the fatty acid composition, δ¹³C values of bulk tissues and individual fatty acids in soil organisms. The fungi Chaetomium globosum and Cladosporium cladosporioides were isotopically labelled by fructose derived from either C₃ or C₄ plants, and the fungal-feeding nematode Aphelenchoides sp. was reared on C. globosum. Fungi and nematodes were used as diet for the Collembolan Protaphorura fimata. The sugar source was fractionated differently by fungal lipid metabolism in a species-specific manner that points to a sensitivity of physiological processing to the non-random distribution of ¹³C/¹²C isotopes in the molecule. As a general trend stearic acid (18:0) was depleted in ¹³C compared to the precursor palmitic acid (16:0), whereas its desaturation to oleic acid (18:1 ω9) favoured the ¹³C-rich substrate.Fatty acid profiles of P. fimata varied due to food source, indicating incorporation of dietary fatty acids into Collembolan tissue. Individuals feeding on fungi had lower amounts in C20 fatty acids, with monoenoic C20 forms not present. This pattern likely separates primary consumers (fungivores) from predators (nematode feeders). The isotopic discrimination in ¹³C for bulk Collembola ranged between −2.6 and 1.4‰ and was dependent on fungal species and C₃/C₄ system, suggesting differences at metabolic branch points and/or isotope discrimination of enzymes. Comparison of δ¹³C values in individual fatty acids between consumer and diet generally showed depletion (i.e. de novo synthesis) or no changes (i.e. dietary routing), but the fractionation was not uniform and affected by the type of ingested food. Fatty acid carbon isotopes were more variable than those of bulk tissues, likely due to both the distrimination by enzymes and the different lipid origin (i.e. neutral or polar fraction).     

Rating and mapping the suitability of the climate for pest risk analysis*

The assessment of the suitability of the climate for pest establishment is an important part of pest risk analysis (PRA). This paper describes the work undertaken by the EU 7th Framework project PRATIQUE (Enhancements of Pest Risk Analysis Techniques) to develop guidance for this component of PRA. Firstly, there is a guide to rating the suitability of the climate in the PRA area using qualitative methods. Secondly, a Decision‐support scheme (DSS) has been created to assist analysts in deciding whether to map climatic suitability, and to guide the selection of the most appropriate method from the large number available. The process of selecting a climatic mapping method is based on a review of the pest’s climatic responses and distribution. A spreadsheet provides a comparison of the potential problems that can arise, depending on the mapping method and on the amount and quality of available data. Diagrams are provided to help choose the location data category that best represents the possible biases in the known distribution of the pest. A second spreadsheet provides general information on the differences and similarities of each method in terms of categories such as functionality, ease of use and quality assurance. A variety of data, tools and supporting documents are available as appendices to the DSS. All of the tools and guides are freely available online.     

Accuracy of asymmetry indices of ground reaction forces for diagnosis of hind limb lameness in dogs

OBJECTIVE: To determine the accuracy of asymmetry indices of ground reaction forces (GRF) for diagnosis of hind limb lameness in dogs. ANIMALS: 36 healthy dogs and 13 dogs with naturally acquired cranial cruciate ligament rupture or hip dysplasia. PROCEDURES: Lameness for affected dogs ranged from not detectable to minor and constant. While dogs trotted on an instrumented treadmill, GRF variables were recorded and analyzed with asymmetry indices. Each index was tested for its ability to discriminate between healthy and affected dogs. Combinations of several indices were also assessed. RESULTS: Vertical force variables had better accuracy than craniocaudal force variables. Peak vertical force was the most accurate variable. Partial asymmetry during trotting was detected in healthy dogs. A multivariate approach that used peak vertical force and maximal rising slope yielded the optimum combination to distinguish between healthy and affected dogs. In addition, sensitivity of 92% or specificity of 95% may be achieved with 2 cutoff values while simultaneously maintaining specificity or sensitivity, respectively, at > 85%. CONCLUSIONS AND CLINICAL RELEVANCE: Asymmetry indices of GRFs were accurate for detection of hind limb lameness in dogs. This is particularly relevant for study designs in which only a single gait evaluation is possible.     

Improving local technologies to manage speargrass (Imperata cylindrica) in southern Benin

Abstract

Speargrass (Imperata cylindrica) is difficult to control in the tropics. Farmers allocate most of their time and labour to weeding speargrass. We investigated in a joint experiment concluded with farmers, how effectively grain legumes suppress speargrass, and the relationships between speargrass suppression, legume grain yield, and subsequent maize yield. Without management, speargrass shoots and rhizomes increased with 31 and 17% per month, respectively. The integration of deep ridging, deep hoe weeding and shading suppressed speargrass more effectively than farmers' practices. Creeping varieties of cowpea that produced most biomass were most successful in suppressing speargrass and in enhancing subsequent maize yields, but erect cowpea cultivars produced more grain. Farmers traded off cowpea yield against speargrass suppression to bridge the hungry gap. They preferred the erect cowpea cultivar wan. The need to forego a harvest and the fact that pigeonpea is not consumed in the area makes pigeonpea presently unsuitable for integration into the cropping system.