Effects of high- vs. low-yield environments on selection for increased biomass yield in switchgrass

No information is available on the effects of different biomass yield environments on selection efficiency in switchgrass (Panicum virgatum L.) breeding improvement. This study was conducted to assess the effects of high- and low-biomass yield environments (HYE and LYE, respectively) on recurrent selection for general combining ability (RSGCA) in a lowland population of switchgrass (NL-94). The top 14 of 65 NL-94 C₀ parent plants were selected based on biomass yield of half-sib (HS) progeny tested for one post-establishment year under HYE and LYE conditions. Nine of the 14 C₀ parent plants were the same based on HS performance under HYE and LYE. Selected plants were intercrossed to produce NL-94 HYE and NL-94 LYE C₁ populations. One hundred and twenty-five HS C₁ progeny families (60 NL-94 HYE and 65 NL-94 LYE) were evaluated for biomass yield for 3 years (2002–2004) under HYE and LYE conditions. The HYE produced about 2.5 times higher biomass yields than the LYE in both C₀ and C₁ HS progeny tests. Estimated additive genetic variance and predicted gains from selection (ΔG) were high in the C₁ populations indicating that RSGCA should achieve higher biomass yields. Mean biomass yields of C₁ HS families originating from the LYE protocol were significantly higher than those of families originating from the HYE protocol in both HYE and LYE performance tests, suggesting greater selection response under LYE in the C₀ population. The estimates of narrow-sense heritability ( ) and ΔG from the C₁ populations indicate that positive response to selection for biomass yield is possible in subsequent cycles of selection under either HYE or LYE, with a possible small advantage for HYE.     

Application of a simulation model for assessing integration of smallholder shifting cultivation and sheep production in Yucatán, Mexico

Simulation models are effective tools to examine interactions between livestock, cropping systems, households, and natural resources. Our study objective was to use an integrated livestock and crop model to assess the outcomes from selected suites of management decisions observed in smallholder sheep-cropping systems of Yucatán, Mexico. The scenarios contrasted specialized systems versus mixed farming, and evaluated the outcomes of increased crop-livestock integration. Mixed enterprise scenarios involving sheep provided more income than specialized enterprises, and capitalized on a lower price of on-farm maize grain, efficient utilization of surplus labor, and availability of common land. Labor and management income was greatest for the unintegrated and partially integrated crop and livestock scenarios. It was more profitable for producers to sell excess grain and maize stover, and use common land to feed the livestock, suggesting that increased integration does not always result in improved outcomes. The results are consistent with a system not yet pushed to the point where integration is inevitable. For all sets of scenarios, the model structure was able to accommodate subtle management differences to produce appropriate biophysical, labor, and economic outcomes. We conclude there is potential to use similar model development methods to describe other crop-livestock systems, thus providing tools for learning, scenario analysis, and impact assessment.     

Rapid and sensitive quantification of amino acids in soil extracts by capillary electrophoresis with laser-induced fluorescence

A growing body of research is arguing that amino acids are key components of the soil nitrogen cycle. For example, we now know that many plants can take up intact amino acids, even in competition with soil microbes. Our growing recognition of the importance of amino acids is not matched by knowledge of the amounts and type of amino acids in the soil, certainly not in comparison with our encyclopaedic knowledge of inorganic N. The primary reason that less is known about amino acids than inorganic N is that measuring the amounts of individual amino acids with conventional chromatographic techniques is slow and typically requires extensive sample clean-up if KCl extracts are analysed. The aim of this study was to develop capillary electrophoresis with laser-induced fluorescence detection (CE-LIF) as a more rapid alternative for measuring individual amino acids in KCl extracts of soil. The CE-LIF method separated 17 common amino acids within 12 min, with detection limits between 7 and 250 nM. One molar KCl extracts could be analysed without any sample clean-up or de-salting, and spike and recovery tests indicated that the complex matrix of soil extracts did not affect quantification. Further evidence of the suitability and robustness of the method came from the repeated analysis (n=5) of the same soil KCl extract. The relative standard deviation of migration times for replicate analyses were <0.2% while relative standard deviations for peak areas were <5%. To demonstrate application of the CE-LIF method to real world problems it was used to analyse amino acids in 1 M KCl extracts from a sub-alpine grassland and a Eucalyptus regnans forest. The most abundant amino acids were Ala, Gly and Arg. Other amino acids present at smaller concentrations or in a minority of samples were Asn, Cit, GABA, Glu, His, Phe, Leu, and Lys. The proposed CE-LIF method offers significant advantages over chromatographic methods via its rapidity, reproducibility and, most importantly, its ability to analyse crude KCl extracts.     

Mercury Concentrations in Largemouth BASS (Micropterus Salmoides) from Five South Carolina Reservoirs

Mercury concentrations in largemouth bass (Micropterus salmoides) bass were compared among five reservoirs in South Carolina. Three of these reservoirs (Lake Russell, Lake Thurmond, and Lake Marion) are accessible to the public and two (L-Lake and Par Pond) are located on the U.S. Department of Energy's Savannah River Site (SRS), which is closed to public access. Age-adjusted mercury concentrations were significantly higher in SRS bass compared to the offsite reservoirs. In addition, mercury concentrations were significantly higher in bass from Par Pond compared to L-Lake and in bass from Lakes Russell and Thurmond compared to Lake Marion. No mercury concentrations in excess of the U.S. Food and Drug Administration action level (1.0 mg?kg^?1) were found in any bass from the public-accessible reservoirs. However, the majority of fish from these reservoirs had mercury concentrations that fall into or exceed the U.S. Environmental Protection Agency consumption category of “no more than one per week". In addition, most fish from these reservoirs had mercury levels in excess of those believed to be detrimental to sensitive avian species.     

Evaluating estimators of the numbers of females with cubs-of-the-year in the yellowstone grizzly bear population

Current management of the grizzly bear (Ursus arctos) population in Yellowstone National Park and surrounding areas requires annual estimation of the number of adult female bears with cubs-of-the-year. We examined the performance of nine estimators of population size via simulation. Data were simulated using two methods for different combinations of population size, sample size, and coefficient of variation of individual sighting probabilities. We show that the coefficient of variation does not, by itself, adequately describe the effects of capture heterogeneity, because two different distributions of capture probabilities can have the same coefficient of variation. All estimators produced biased estimates of population size with bias decreasing as effort in creased. Based on the simulation results we recommend the Chao estimator for model M _h be used to estimate the number of the female bears with cubs of the year; however, the estimator of Chao and Shen may also be useful depending on the goals of the research.     

Biphasic effect of falcarinol on caco-2 cell proliferation, DNA damage, and apoptosis

The polyacetylene falcarinol, isolated from carrots, has been shown to be protective against chemically induced colon cancer development in rats, but the mechanisms are not fully understood. In this study CaCo-2 cells were exposed to falcarinol (0.5-100 microM) and the effects on proliferation, DNA damage, and apoptosis investigated. Low-dose falcarinol exposure (0.5-10 microM) decreased expression of the apoptosis indicator caspase-3 concomitantly with decreased basal DNA strand breakage. Cell proliferation was increased (1-10 microM), whereas cellular attachment was unaffected by <10 microM falcarinol. At concentrations above 20 microM falcarinol, proliferation of CaCo-2 cells decreased and the number of cells expressing active caspase-3 increased simultaneously with increased cell detachment. Furthermore, DNA single-strand breakage was significantly increased at concentrations above 10 microM falcarinol. Thus, the effects of falcarinol on CaCo-2 cells appear to be biphasic, inducing pro-proliferative and apoptotic characteristics at low and high concentrations of falcarinol, respectively.     

Thermal effects on water retention behaviour of unsaturated collapsible loess

Journal of Soils and Sediments - Temperature has a significant influence on water retention curve (WRC) because temperature affects surface tension of water and volumetric behaviour of soil....     

Emission Inventories for SO2 and NOx in Developing Country Regions in 1995 with Projected Emissions for 2025 According to Two Scenarios

Water, Air, &; Soil Pollution - Top-down inventories of anthropogenic SO2 and NOx emissions were compiled for 1995 for developing country regions. Regional emission factors were used to generate...     

Identifying sources of snowmelt acidification with a watershed mixing model

We used ionic tracers to estimate the volume of old (soil and ground) water interacting with snowmelt in eleven Adirondack, NY watersheds. The contribution of old water varied from 66 to 90%, with no general relationship between old water % and soil depth to till. This approach also discriminated between watershed retention and release of particular ions to lake outlet water during snowmelt. Most watersheds released NO₃ ^? during snowmelt, in addition to the snowpack NO₃ ^?. Nitrification of snowpack NH₄ ⁺ explained part of the additional NO₃ ^? in lake out outlet water, but some NO₃ ^? was likely mineralized nitrogen from soil organic matter. All watersheds retained NH₄ ⁺ as well. Nitrogen release was greatest in the acidic watersheds in the southwestern Adirondacks, a region thought to be impacted by anthropogenic deposition. During snowmelt, Ca²⁺ and Mg²⁺ ions (presumably from soil exchange sites) were also released from most watersheds. In watersheds with acidic (minimum pH<4.6) lake outlet water, Al was also released during snowmelt. Thus, lake outlet water acidification during snowmelt was both buffered by cation release, and intensified by NO₃ ^? release. If the soil exchangeable cation pools were not replenished prior to snowmelt, or NO₃ ^? mobilization were increased, acidification during snowmelt would intensify.