Pigeonpea improvement: An amalgam of breeding and genomic research

In the past five decades, constant research has been directed towards yield improvement in pigeonpea resulting in the deployment of several commercially acceptable cultivars in India. Though, the genesis of hybrid technology, the biggest breakthrough, enigma of stagnant productivity still remains unsolved. To sort this productivity disparity, genomic research along with conventional breeding was successfully initiated at ICRISAT. It endowed ample genomic resource providing insight in the pigeonpea genome combating production constraints in a precise and speedy manner. The availability of the draft genome sequence with a large‐scale marker resource, oriented the research towards trait mapping for flowering time, determinacy, fertility restoration, yield attributing traits and photo‐insensitivity. Defined core and mini‐core collection, still eased the pigeonpea breeding being accessible for existing genetic diversity and developing stress resistance. Modern genomic tools like next‐generation sequencing, genome‐wide selection helping in the appraisal of selection efficiency is leading towards next‐generation breeding, an awaited milestone in pigeonpea genetic enhancement. This paper emphasizes the ongoing genetic improvement in pigeonpea with an amalgam of conventional breeding as well as genomic research.     

Inheritance and molecular mapping of restorer‐of‐fertility (Rf) gene in A2 hybrid system in pigeonpea (Cajanus cajan)

Inheritance of fertility restorer gene in pigeonpea was studied using F₂ and BC₁F₁ populations derived from cross AL103A × IC245273. It was found to be controlled by single dominant gene. Out of 228 SSR primer pairs, 33 primer pairs showed parental polymorphism, while four primers were found polymorphic in bulk segregant analysis (BSA). These four primers viz., CcM 1615, CcM 0710, CcM 0765 and CcM 1522 were used for genotyping of F₂ population and were found to be placed at 3.1, 5.1, 28.1 and 45.8 cM, respectively. Two of them, CcM 1615 and CcM 0710, evinced clear and unambiguous bands for fertility restoration in F₂ population. The Rf gene was mapped on linkage group 6 between the SSR markers CcM 1615 and CcM 0710 with the distances of 3.1 and 5.1 cM, respectively. The accuracy of the CcM 1615 was validated in 18 restorers and six maintainer lines. The marker CcM 1615 amplified in majority of male restorer lines with a selection accuracy of 91.66%.     

Preparation and Quality Evaluation of Nutritionally Enriched Jam Made from Blends of Indian Blackberry and Other Fruits

Jamun (Syzygium cumini) is a tropical, underutilized fruit which is highly perishable in nature. It is a good source of vitamin C, tannins, gallic acid and anthocyanins and its beneficial effects are mostly due to the presence of bioactive compounds (pigments and phenolic compounds) in it. Due to astringent and fibrous nature, preparation of jam from jamun pulp is quite difficult, but other fruits (apple and kiwifruit) can be incorporated in it to improve its quality. This study aims to develop jam from blends of jamun with other fruits and analyse various physico-chemical, nutritional, textural and sensory properties. It was found that physico-chemical properties of jams were not found to vary greatly, but the jamun–kiwifruit jam was found to have fairly high amount of antioxidants(46.75 ± 0.67%), tartaric acid (26.24 ± 0.02 mg/100g sample), ascorbic acid (0.08 ± 0.01 mg/100 g sample) and lactic acid (23.95 ± 0.01 mg/100g sample) and lowest amount of 5-hydroxymethyl-2-furaldehyde (0.38 ± 0.04 mg/100 g sample). Jamun jam and jamun–kiwifruit jam possessed the texture required for jam while jamun–apple jam was found to be a relatively harder gel. Jam made with jamun and kiwifruit pulp was found to have highest acceptability on the basis of sensory evaluation.     

Grain yield,nitrogen use efficiency and tillage intensity in wheat as affected by precision nutrient management

ABSTRACT

The present studies were conducted to evaluate the effect of different nutrient management practices under two tillage options in wheat. The experiments were laid out in split-plot design with a combination of two varieties (WH 1105 and HD 2967) and two tillage options (Conventional and No tillage) in the main plot and six precision nutrient management practices [absolute control, site-specific nutrient management with Nutrient Expert for wheat (SSNM-NE)(170 kg nitrogen (N)/ha), SSNM NE+GreenSeeker (GS)(153/158 N kg/ha), N₁₂₀ (120 kg N/ha) before irrigation, N₁₂₀ after irrigation and N Rich (180 kg N/ha)] in subplot replicated thrice. The grain yield and quality characters in no tillage (NT) and conventional tillage (CT) were similar but agronomic efficiency was higher in NT. Both the varieties (WH 1105 and HD 2967) gave similar grain yield and quality. Wheat variety WH 1105 recorded significantly higher sodium dodecyl sulfate sedimentation (SDS) and gluten index. The treatment SSNM NE+GS had resulted in 107.1% higher grain yield than no nitrogen control but similar to enriched N plot (180 kg N/ha). The grain protein, SDS and gluten index in need-based nutrient management (SSNM+GS) treatment were found to be similar as recorded in SSNM-NE (170 kgN/ha) and N enriched plot (180 kg N ha^?1). The agronomic efficiency and recovery efficiency in SSNM+GS were also better than SSNM NE.     

Soil and nutrients losses under different crop covers in vertisols of Central India

Purpose

Accelerated erosion removes fertile top soil along with nutrients through runoff and sediments, eventually affecting crop productivity and land degradation. However, scanty information is available on soil and nutrient losses under different crop covers in a vertisol of Central India. Thus, a field experiment was conducted for 4 years (2010–2013) to study the effect of different crop cover combinations on soil and nutrient losses through runoff in a vertisol.

Materials and methods

Very limited information is available on runoff, soil, and nutrient losses under different vegetative covers in a rainfed vertisol. Thus, the hypothesis of the study was to evaluate if different crop cover combinations would have greater impact on reducing soil and nutrient losses compared to control plots in a vertisol.

This experiment consisted of seven treatment combinations of crop covers namely soybean (Glycine max) (CC₁), maize (Zea mays) (CC₂), pigeon pea (Cajanus cajan) (CC₃), soybean (Glycine max)?+?maize (Zea mays) ??1:1 (CC₄), soybean (Glycine ma x))?+?pigeon pea (Cajanus cajan) ?2:1 (CC₅), maize (Zea mays)?+?pigeon pea (Cajanus cajan) ??1:1 (CC₆), and cultivated fallow (CC₇). The plot size was 10?×?5 m with 1% slope, and runoff and soil loss were measured using multi-slot devisor. All treatments were arranged in a randomized block design with three replications.

Results and discussion

Results demonstrated that the runoff and soil loss were significantly (p?<?0.05) higher (289 mm and 3.92 Mg ha^?1) under cultivated fallow than those in cropped plots. Among various crop covers, sole pigeon pea (CC₃) recorded significantly higher runoff and soil loss (257 mm and 3.16 Mg ha^?1) followed by that under sole maize (CC₂) (235 mm and 2.85 Mg ha^?1) and the intercrops were in the order of maize?+?pigeon pea (211 mm and 2.47 Mg ha^?1) followed by soybean?+?maize (202 mm and 2.38 Mg ha^?1), and soybean?+?pigeon pea (195 mm and 2.15 Mg ha^?1). The lowest runoff and soil loss were recorded under soybean sole crop (194 mm and 2.27 Mg ha^?1). The data on nutrient losses indicated that the highest losses of soil organic carbon (SOC) (25.83 kg ha^?1), total nitrogen (N), phosphorus (P), and potassium (K) (7.76, 0.96, 32.5 kg ha^?1) were recorded in cultivated fallow (CC₇) as compared to those from sole and intercrop treatments. However, sole soybean and its intercrops recorded the minimum losses of SOC and total N, P, and K, whereas the maximum losses of nutrients were recorded under pigeon pea (CC₃). The system productivity in terms of soybean grain equivalent yield (SGEY) was higher (p?<?0.05) from maize?+?pigeon pea (3358 kg ha^?1) followed by that for soybean?+?pigeon pea (2191 kg ha^?1) as compared to sole soybean. Therefore, maize?+?pigeon pea (1:1) intercropping is the promising option in reducing runoff, soil-nutrient losses, and enhancing crop productivity in the hot sub-humid eco-region.

Conclusions

Study results highlight the need for maintenance of suitable vegetative cover as of great significance to diffusing the erosive energy of heavy rains and also safe guarding the soil resource from degradation by water erosion in vertisols.

     

Biocontrol potential of Pseudomonas azotoformans,Serratia marcescens and Trichoderma virens against Fusarium wilt of Dalbergia sissoo

Wilt disease caused by Fusarium solani is a serious constraint to Dalbergia sissoo (shisham) plantations in northern India. In this study, the antagonistic potential of 40 bacterial isolates recovered from rhizophere soil of healthy shisham trees, and a well‐characterized Trichoderma species (Trichoderma virens) were tested for their possibility as biocontrol agents for F. solani. Two promising isolates (S1 and S15) were identified which inhibited pathogen growth, caused chitin degradation, produced siderophores and solubilized phosphate in vitro. Isolate S15 scored highest for hydrogen cyanide (HCN) production while isolate S1 was a non‐HCN producer. These two isolates were identified as Serratia marcescens (S1) and Pseudomonas azotoformans (S15) following sequence analysis of 16S rDNA. In dual culture assays, T. virens caused 80% inhibition of mycelial growth of the test fungus. The three selected antagonists when tested in planta in the glasshouse completely suppressed production of wilt symptoms on 12‐month‐old shisham plants. Further work is needed to ascertain the potential of these isolates to be used as biocontrol agents to manage shisham wilt under field conditions.     

Confirmation of organothiophosphorus insecticide residues in fruit and vegetables by oxidative derivatization.

Oxidative derivatization of 10 organothiophosphorus insecticides at nanogram levels, with neutralized sodium hypochlorite (NaOCl) produced their respective P=O oxygen analogs, as shown by GC/MS and FT-IR analysis.In addition, phorate resulted in phorate oxon sulfoxide while methidathion gave a mixture of oxidation products. Four macro-scale oxidation products of methidathion were isolated by thin layer chromatography and 3 were identified, namely, methidaoxon, bis(2-methoxy-delta2-1,3,4-thiadiazolin-5-on-4-yl) sulfide, and the corresponding disulfide, by comparison of their infrared and mass spectra with those of authentic samples. The relative response to sulfide and disulfide products of the flame photometric detector in both the P- and S-modes is discussed. This derivatization is applied to the confirmation of chlorpyrifos, ethion, phorate, DMPA (Zytron), leptophos, and methidathion in celery, potatoes, lettuce, tomatoes, and apples at 0.25-0.5 ppm fortification levels.     

Laboratory study of phosphorus forms and test procedures on soils under aerobic and anaerobic conditions

The inorganic forms of phosphorus in nine samples of surface soils from the Nainital Tarai of India were determined by a series of extractions with different reagents after incubation for 45 days under aerobic or anaerobic conditions. The forms of phosphorus in samples incubated under aerobic conditions and the pH range of 7.2–8.5 indicated that the soils had been subject to slight chemical weathering. Anaerobic incubation to simulate conditions in lowland rice paddies converted part of the inorganic phosphorus into more labile forms, based on changes in amounts of isotopically exchangeable phosphorus. Amounts of the element converted to more labile forms differed among the nine soil samples.A better correlation was found between amounts of phosphorus extracted by 0.5M NaHCO³ (Olsen's method) than by 0.03N NH₄F in 0.25N HCl (Bray's method) and the isotopically exchangeable phosphorus. The better correlation suggests that the bicarbonate extraction would be the better method for estimating “availablelrd phosphorus in soils of lowland rice paddies. Recalibration of the test prior to such use seems desirable to allow for increases in amounts of phosphorus in labile forms after soils have been shifted from aerobic to anaerobic conditions.     

Food consumption and digestive enzyme activity of Clarias batrachus exposed to various temperatures

The effect of temperature on the food consumption rate and the digestive enzyme activities of Clarias batrachus (80.60 ± 5.34 g) were evaluated. Fish were exposed to six different temperatures of 10, 15, 20, 25, 30 and 35 °C following an acclimation temperature of 25 °C. The rate of temperature change was 2 °C day^?1. Highest food consumption was recorded at 25 °C. It gradually reduced with decreasing water temperature. Food consumption rate was significantly (P < 0.05) lower at 10 °C compared with other treatments. Hence, 46.67, 8.20–23.58 and 1.02–6.15% reduced food consumptions were recorded in groups exposed at 10, 15 and 20 °C temperatures, respectively, compared with the 25 °C. The consumption rate was not affected in fish exposed at 30 and 35 °C. Total protease, trypsin and chymotrypsin activities were significantly (P < 0.05) higher in fish exposed at 25 °C compared with others. Lipase activity was significantly (P < 0.05) higher in fish exposed at 30 °C compared with others. Lowest enzyme activities were recorded at 10 °C. Water temperature below 25 °C affected the food consumption and digestive enzyme activities in fish that served as indicators of stress in fish.     

High‐throughput Cryopreservation of Sperm from Sex‐reversed Southern Flounder,Paralichthys lethostigma

The Southern flounder, Paralichthys lethostigma, is a valuable aquaculture fish with established markets in the USA. All‐female production in this species is an important technology for aquaculture because the females usually have body sizes twice those of males at the same age, and sex‐reversed males (genotypic XX neomales) are used for all‐female production by crossing with genetically normal females. However, sperm volume from the neomales is usually small (<0.5 mL) and limits their application for all‐female fish production. Cryopreservation of sperm from these sex‐reversed neomales will provide access on demand with increased efficiency to extend the application of neomales. The goal of this study was to develop a protocol for cryopreservation of sperm from the Southern flounder by using an automated high‐throughput processing system. The objectives were to: (1) determine the effect of osmolality on activation of sperm motility; (2) evaluate the effect of extender solutions on sperm motility capacity; (3) evaluate the acute toxicity of cryoprotectants (dimethyl sulfoxide [DMSO], propylene glycol, and polyethylene glycol) on sperm motility, and (4) estimate the effect of cooling rate on sperm cryopreservation and post‐thaw fertilization. Sperm motility was activated when osmolality was 400 mOsmol/kg or higher. Of the three extender buffers tested, HEPES4‐(2‐hydroxyethyl)‐1‐piperazineethanesulfonic acid (HEPES) at 300 mOsmol/kg resulted in better protection for sperm motility than did Hanks' balanced salt solution and Mounib solution at 300 mOsmol/kg during 7 d of refrigerated storage. After 30 min equilibration with the cryoprotectant of 15% DMSO, sperm motility was 24 ± 21% (fresh sperm motility without any cryoprotectants was 42%). After cooling at a rate of 20 C/min, post‐thaw sperm motility was 8 ± 5% and fertilization was 63 ± 40% evaluated at the 32–64 cell stage (5 × 10⁵ sperm per egg). Overall, a protocol was developed for sperm cryopreservation in the Southern flounder with high‐throughput processing, which provides a tool to preserve the valuable genetic resources from neomale flounders, and enables germplasm repository development for the Southern flounder.