The first report on serotyping of bluetongue virus in small ruminants of Khyber Pakhtunkhwa province,Pakistan

Bluetongue virus (BTV), a member of Orbivirus genus (family Reoviridae), is a non-contagious infection of domestic and wild ruminants. The current study was designed to detect various serotypes of BTV in small ruminants of Khyber Pakhtunkhwa (KPK) province of Pakistan, along with their effects on hemato-biochemical parameters. A total of 408 serum samples in four districts (Mansehra, Abbottabad, Swabi, and Kohat) of KPK from small ruminants were screened based on competitive ELISA (cELISA). A total of 204 (50%) samples were found positive for BTV group–specific antibodies. The seropositive samples were processed for the detection of BTV serotypes through real-time polymerase chain reaction (qPCR). Out of 204 cELISA-positive samples, 60 (29.41%) were found positive through qPCR. Three serotypes [6, 8, 9] were detected from Mansehra District and two from Kohat [2, 8] and Abbottabad [6, 8], while only one from Swabi [8]. The serotype “8” was found consistently in all the four study districts. A significant (p?<?0.05) increase in the level of blood urea nitrogen (BUN) and alkaline phosphatase (ALP) was recorded in goats, whereas aspartate aminotransferase (AST) in sheep infected with BTV, compared to healthy animals. The hematological parameters showed significantly (p?<?0.05) raised total leucocyte count (TLC) in both sheep and goats, whereas only hematocrit (HCT) value was increased significantly (p?<?0.05) in infected sheep. This is the first report on serotyping of BTV among small ruminants in Pakistan.

     

Comparative evaluation of different therapeutic protocols for contagious caprine pleuropneumonia in Himalayan Pashmina goats

Tropical Animal Health and Production - Therapeutic management of contagious caprine pleuroneumonia (CCPP) involves mostly the use of oxytetracycline followed by enrofloxacin and rarely tylosin. In...     

Nitrous oxide emissions from an irrigated sandy-clay loam cropped to maize and wheat

 Nitrous oxide (N₂O) emissions were measured from an irrigated sandy-clay loam cropped to maize and wheat, each receiving urea at 100 kg N ha^–1. During the maize season (24 August–26 October), N₂O emissions ranged between –0.94 and 1.53 g N ha^–1 h^–1 with peaks during different irrigation cycles (four) ranging between 0.08 and 1.53 g N ha^–1 h^–1. N₂O sink activity during the maize season was recorded on 10 of the 29 sampling occasions and ranged between 0.18 and 0.94 g N ha^–1 h^–1. N₂O emissions during the wheat season (22 November–20 April) varied between –0.85 and 3.27 g N ha^–1 h^–1, whereas peaks during different irrigation cycles (six) were in the range of 0.05–3.27 g N ha^–1 h^–1. N₂O sink activity was recorded on 14 of the 41 samplings during the wheat season and ranged between 0.01 and 0.87 g N ha^–1 h^–1. Total N₂O emissions were 0.16 and 0.49 kg N ha^–1, whereas the total N₂O sink activity was 0.04 and 0.06 kg N ha^–1 during the maize and wheat seasons, respectively. N₂O emissions under maize were significantly correlated with denitrification rate and soil NO₃ ^–-N but not with soil NH₄ ⁺-N or soil temperature. Under wheat, however, N₂O emissions showed a strong correlation with soil NH₄ ⁺-N, soil NO₃ ^–-N and soil temperature but not with the denitrification rate. Under either crop, N₂O emissions did not show a significant relationship with water-filled pore space or soil respiration. Received: 11 June 1997     

Genetic variation in radish (Raphanus sativus L.) germplasm from Pakistan using morphological traits and RAPDs

Genetic diversity of 30 radish (Raphanus sativus L.) accessions was investigated at the phenotypic level with morphological characters and at the DNA level using the random amplified polymorphic DNA (RAPD) technique. Thirty-six morpho-physiological traits were recorded from seedling stage to harvest. The 31 primers used generated 202 RAPD bands, of which 158 (78.2%) were polymorphic. Multivariate procedures were used to classify the germplasm on the basis of phenotypic traits and RAPD fragments. Dendrograms were generated for the Euclidean distance from the morphological data and the Nei's genetic distance from the RAPD markers. Phenotypically, all the accessions were classified into four major groups corresponding to the different forms of cultivated radish. The morphological diversity existing within each of these groups suggested that they should be discriminated into the three botanical convarieties, sativusT (large-rooted), caudatus (pod-type) and oleifer (oilseed-type). Clustering of the accessions did not show any pattern of association between the morphological characters and the collection sites. Instead, landrace groups were associated with their morphological similarities and horticultural uses. On the other hand, the intra-specific genetic relationships of several accessions based on RAPD analysis were related primarily to their collection sites rather than to their phenotypic affinities. The level of polymorphism exhibited by the various convarieties could be exploited in genetic mapping populations to tag economically important traits. These genotypes also could serve as a useful germplasm source for root, leaf, pod and seed. This preliminary study of traditional radish landraces from Pakistan provides useful information regarding their horticultural potential.     

Infection of the subcutis and skin of cats with rapidly growing mycobacteria: a review of microbiological and clinical findings.

Mycobacteria were isolated and characterised from 49 cats with extensive infections of the subcutis and skin. Cats were generally between 3 and 10 years of age, and female cats were markedly over-represented. All isolates were rapid-growers and identified as either Mycobacteria smegmatis (40 strains) or M fortuitum (nine strains). On the basis of Etest for minimum inhibitory concentration and/or disc diffusion susceptibility testing, all strains of M smegmatis were susceptible to trimethoprim while all strains of M fortuitum were resistant. M smegmatis strains were typically susceptible to doxycycline, gentamicin and fluoroquinolones but not clarithromycin. All M fortuitum strains were susceptible to fluoroquinolones, and often also susceptible to gentamicin, doxycycline and clarithromycin. Generally, M smegmatis strains were more susceptible to antimicrobial agents than M fortuitum strains. Treatment of mycobacterial panniculitis involves long courses of antimicrobial agents, typically of 3-6 months, chosen on the basis of in vitro susceptibility testing and often combined with extensive surgical debridement and wound reconstruction. These therapies will result in effective cure of the disease. One or a combination of doxycycline, ciprofloxacin/enrofloxacin or clarithromycin are the drugs of choice for long-term oral therapy.     

Bio-flocs technology application in over-wintering of tilapia

A 50-day experiment was conducted to investigate the effectiveness of the bio-flocs technology for maintaining good water quality in over-wintering ponds for tilapia hybrid fingerlings (Oreochromis niloticus × Oreochromis aureus). To preserve adequate water temperatures in the ponds, they were covered with polyethylene sheets and the water exchange rate was minimized to increase pond water temperature. To avoid water quality deterioration, starch was added to the ponds to stimulate the formation of bio-flocs. Temperature in the covered ponds could easily be controlled and was 0.4–4.9 °C higher than the influent water. Adjusting the C/N ratio in the ponds by adding starch or increasing the amount of carbohydrates added through the feed limited the presence of inorganic nitrogen species when the C/N was about 20, even at high stocking densities of 20 kg/m³ at harvest. Fish survival levels were excellent, being 97 ± 6% for 100 g fish and 80 ± 4% for 50 g fish. Moreover, at harvest the condition of the fish was good in all ponds with a fish condition factor of 2.1–2.3. Overall, these findings can help to overcome over-wintering problems, particularly mass mortality of fish due to low temperatures in the ponds.     

Bacteria Etiological Agents Causing Lower Respiratory Tract Infections and Their Resistance Patterns

Background:

Lower respiratory tract infections (LTRIs) are among the most common infectious diseases with potential life-threatening complications.

Methods:

The study consisted of 426 patients with suspected LTRIs from mid and far western region of Nepal between September 2011 and July 2014. The specimens were collected and processed according to the standard microbiological methods at the Central Laboratory of Microbiology of Nepalgunj Medical College, Nepal.

Results:

Among the isolated Gram-positive organisms, Streptococcus pneumonia (n = 30, 51.7%) was the most predominant pathogen, followed by Staphylococcus aureus (n = 28, 48.3%). Among the isolated Gram-negative organisms, Pseudomonas aeruginosa (n = 71, 35.32%) was the most predominant pathogen, followed by Haemophilus influenzae (n = 68, 33.83%), Klebsiella pneumonia (n = 36, 17.19%), and Escherichia coli (n = 26, 12.94%). The pattern of resistance varied regarding the bacteria species, and there were multi-resistant isolates. Also, a significant difference (P < 0.05) was observed between males and females for each type of bacterial species. Among 259 isolates, 86 (33.20%) were from children aged 1-10 years, which were statistically significant (P < 0.05) compared to the other age groups.

Conclusions:

P. aeruginosa and H. influenzae (Gram-negative) and S. pnemoniae (Gram-positive) were the most common bacterial isolates recovered from LTRIs. Age group of 1-10 years old was at a higher risk. Many isolates showed appreciable levels of antibiotic resistance due to antibiotic abuse. There is a need to increase surveillance and develop better strategies to curb the increasing prevalence of LRTI in this region of Nepal.Key Words: Bacterial infections, Antimicrobial drug resistance, Respiratory system, Nepal     

Tree age influences nutritional,pectin, and anatomical changes in developing ‘Kinnow’ mandarin (Citrus nobilis Lour × Citrus deliciosa Tenora) fruit

An understanding of variation in fruit quality in relation to tree age can help understand the issue of poor fruit quality in young orchards; however, limited information is available on the citrus fruit. In this study, the endogenous nutritional status in rind, rag, and leaves; pectin status in rind and rag; and anatomical fruit growth parameter in rind tissues were studied in ‘Kinnow’ mandarins fruit during their development on trees from three age (6-, 18-, and 35-year-old) groups. In older (35-year-old) trees, rind, rag, and leaf nitrogen (N), phosphorus (P), and potassium (K) concentrations were superior. In fruit from all tree age groups, total pectin and protopectin reduced; however water-soluble pectin (WSP) improved. In rind tissues harvested from young (6-year-old) trees, cell density was more while cell size was less. In all tree age groups, cell density in rind tissues correlated negatively with rind WSP.