Isolation and identification of oligomers from partial degradation of lime fruit cutin

Complementary degradative treatments with low-temperature hydrofluoric acid and methanolic potassium hydroxide have been used to investigate the protective biopolymer cutin from Citrus aurantifolia (lime) fruits, augmenting prior enzymatic and chemical strategies to yield a more comprehensive view of its molecular architecture. Analysis of the resulting soluble oligomeric fragments with one- and two-dimensional NMR and MS methods identified a new dimer and three trimeric esters of primary alcohols based on 10,16-dihydroxyhexadecanoic acid and 10-oxo-16-hydroxyhexadecanoic acid units. Whereas only 10-oxo-16-hydroxyhexadecanoic acid units were found in the oligomers from hydrofluoric acid treatments, the dimer and trimer products isolated to date using diverse degradative methods included six of the seven possible stoichiometric ratios of monomer units. A novel glucoside-linked hydroxyfatty acid tetramer was also identified provisionally, suggesting that the cutin biopolymer can be bound covalently to the plant cell wall. Although the current findings suggest that the predominant molecular architecture of this protective polymer in lime fruits involves esters of primary and secondary alcohols based on long-chain hydroxyfatty acids, the possibility of additional cross-linking to enhance structural integrity is underscored by these and related findings of nonstandard cutin molecular architectures.     

Characterization and distribution of phenolics in carrot cell walls

Carrot cell walls have been shown to contain significant quantities of esterified p-hydroxybenzoic acid, which is presumed to be esterified to cell wall polymers. The purpose of this study was to investigate the distribution of p-hydroxybenzoic acid and related phenolics among carrot cell wall polysaccharides. Cell wall material was prepared from fresh carrot root tissues and extracted sequentially with water, imidazole, cyclohexane- trans-1,2-diamine- N, N, N', N'-tetraacetate, Na 2CO 3, and KOH (0.5, 1, and 4 M) to leave a cellulose-rich residue. The fractions were analyzed for their carbohydrate and phenolic acid components. Selected soluble fractions were subfractionated further by graded precipitation in ethanol. The majority of the polymer fractions comprised pectic polysaccharides, with varying quantities of neutral sugars (arabinose and galactose). Hemicellulosic polymers were generally found only in the strong alkali extracts (4 M KOH). p-OH-benzoic acid was the predominant phenolic ester and was associated with most fractions analyzed; p-OH-benzaldehyde was also detected in the fractions at much lower levels. Principal components analysis of the chemical data indicated that the p-OH-benzoic acid was associated predominantly with the branched pectic polysaccharides, in contrast to the p-OH-benzaldehyde. The possible roles and functional properties of these phenolics are discussed.     

Integrated pest management of Tuta absoluta: practical implementations across different world regions

Journal of Pest Science - The South American tomato pinworm, Tuta absoluta (Meyrick) (Lepidoptera: Gelechiidae), has invaded most Afro-Eurasian countries and is threatening worldwide tomato...     

Dry matter partitions and specific leaf weight of soybean change with tree competition in an intercropping system

In 2004 and 2005, the yield, leaf area, dry weight and dry weight partitions of soybeans were determined at the Agroforestry Research Site (ARS) (est. 1987, Ontario, Canada). Soybean was intercropped with poplar (Populus deltoides x nigra DN-177 L., 556 m³crown tree⁻¹), silver maple (Acer saccharinum L., 308 m³), black walnut (Juglans nigra L., 148 m³) and pecan (Carya illinoensis Wangenh., 114 m³), or grown alone (monoculture). Yield of soybean was not different in either year between the monoculture and the black walnut or pecan intercrops. In the poplar and silver maple treatments, yield was 66 and 85% (2004 and 2005) lower than in the monoculture. Despite the fact that different tree species were used, there was a significant negative linear regression between yield and tree crown volume (R ² = 0.76, P = 0.0049 and R ² = 0.93, P < 0.0001 in 2004 and 2005, respectively). With increasing tree crown volume, soybean tended to partition more dry matter to the photosynthetic and reproductive parts and less to structural tissue and petiole. This demonstrates the phenotypic flexibility of the crop component in agroforestry systems. Contrary to theoretical predictions, soybean leaves were thicker as shade increased (increase by 6.2 × 10⁻⁴–1.2 × 10⁻³ mg cm⁻², per unit of crown volume), pointing to competitive interactions specific to tree-based intercrops.     

The North American long-term soil productivity experiment: Findings from the first decade of research

First decade findings on the impacts of organic matter removal and soil compaction are reported for the 26 oldest installations in the nation-wide network of long-term soil productivity sites. Complete removal of surface organic matter led to declines in soil C concentration to 20 cm depth and to reduced nutrient availability. The effect is attributed mainly to the loss of the forest floor. Soil C storage seemed undiminished, but could be explained by bulk density changes following disturbance and to decomposition inputs of organic C from roots remaining from the harvested forest. Biomass removal during harvesting had no influence on forest growth through 10 years. Soil compaction effects depended upon initial bulk density. Soils with densities greater than 1.4 Mg m⁻³ resisted compaction. Density recovery was slow, particularly on soils with frigid temperature regimes. Forest productivity response to soil compaction depended both on soil texture and the degree of understory competition. Production declined on compacted clay soils, increased on sands, and generally was unaffected if an understory was absent.     

Ecological lessons from long-term studies in experimental forests: Ponderosa pine silviculture at Pringle Falls Experimental Forest, central Oregon

The United States Department of Agriculture (USDA) Forest Service celebrated the 100th anniversary of its network of experimental forests in 2008. For a century, the network of experimental forests have contributed immensely—both in the US and around the world—to the practical understanding of the environment and to the formation of management approaches and policies that affect our use of forests and the natural resources they contain. Experimental forests provide places for long-term science and management studies in major vegetation types across the 789,140 km² of public land administered by the Forest Service. They also provide an incredible wealth of records and knowledge of environmental change in natural and managed forest ecosystems across the United States. Pringle Falls Experimental Forest (Pringle Falls), southwest of Bend, Oregon, is the oldest experimental forest in the Pacific Northwest and is the site of some of the earliest forest management and silviculture research in this region. Research at this site began in 1914, and it was formally established as part of the national network of experimental forests in 1931 as a center for silviculture, forest management, and insect and disease research in ponderosa pine forests east of the Oregon Cascade Range. As part of the celebration of the Centennial Anniversary of the network of experimental forests, it is timely to examine a few of the ecological lessons that have resulted from long-term studies at Pringle Falls. Two different yet interconnected themes are traced: (1) management of existing old-growth ponderosa pine; and (2) management of young or immature ponderosa pine. Examples of ecological lessons, drawn from long-term studies established or followed by James W. Barrett, Matt D. Busse, Patrick H. Cochran, Walter G. Dahms, F. Paul Keen, Ernest L. Kolbe, Edwin L. Mowat, William W. Oliver, Ram Oren, Chester T. Youngberg, and Jianwei Zhang illustrate how work at Pringle Falls has both pursued and influenced societal demands for forest management strategies, and how this trajectory has cycled back to the themes under which the experimental forest was first established. Finally, these two themes are integrated as drivers for new landscape-scale long-term research at Pringle Falls, designed to evaluate the effects of thinning and fuel reduction treatments on multiple, interacting forest stresses of fire, insects, wind, and climate change.     

Fish assemblage production estimates in Appalachian streams across a latitudinal and temperature gradient

Production of biomass is central to the ecology and sustainability of fish assemblages. The goal of this study was to empirically estimate and compare fish assemblage production, production‐to‐biomass (P/B) ratios and species composition for 25 second‐ to third‐order streams spanning the Appalachian Mountains (from Vermont to North Carolina) that vary in their temperature regimes. Fish assemblage production estimates ranged from 0.15 to 6.79 g m^?2 year^?1, and P/B ratios ranged from 0.20 to 1.07. There were no significant differences in mean assemblage production across northern cold‐water, southern cold‐water and southern cool‐water streams (p = .35). Two warm‐water streams, not included in these comparisons, had the highest mean production and biomass values. Mean assemblage P/B was significantly higher in northern cold‐water streams relative to southern cold‐water and cool‐water streams (p = .01). Species evenness in production declined with stream temperature and differed significantly across the lower latitude cold‐water, cool‐water and warm‐water streams and the higher latitude (i.e. more northern) cold‐water streams. Our fish assemblage production estimates and P/B ratios were both lower and higher compared to previously published estimates for similar stream habitats. This study provides empirical fish assemblage production estimates to inform future research on southern Appalachian streams and on the potential impacts of varying temperature regimes on cold‐water, cool‐water and warm‐water fish production in the coming decades as climate change continues to threaten fish assemblages.     

The effects of dietary HUFA level on flame angelfish (Centropyge loriculus) spawning,egg quality and early larval characteristics

This study was conducted to determine the effects of dietary highly unsaturated fatty acids (HUFA) on flame angelfish (Centropyge loriculus) reproduction, and egg and larval quality. In the experiment, formulated diets containing 1.8, 2.9 or 3.6% n‐3 HUFA were fed to flame angelfish broodstock (n = 4) for 5 months. Mean fecundity (daily egg production), egg fertilization rates and embryo viability were used as indicators of egg quality. In addition, mean egg diameter, oil globule diameter, per cent hatch, larval size at hatch, per cent survival to yolk exhaustion and larval size at yolk exhaustion were recorded for each treatment. Flame angelfish fed the diet containing 3.6% n‐3 HUFA exhibited significantly increased fecundity, fertilization rates and embryo viability than fish that were fed the other two formulated diets. Egg diameter, egg oil globule diameter, larval size at hatch, larval survival to yolk exhaustion and larval size at yolk exhaustion from the 3.6% n‐3 HUFA broodstock treatment group were not significantly different from those derived from the Control broodstock treatment. These data revealed that flame angelfish egg quality could respond rapidly (within weeks) to maternal dietary changes. Results from this study further support that dietary HUFA composition can significantly affect broodstock reproductive performance as well as subsequent performance of eggs and larvae.     

Requirement for coronin 1 in T lymphocyte trafficking and cellular homeostasis

The evolutionarily conserved actin-related protein (Arp2/3) complex is a key component of actin filament networks that is dynamically regulated by nucleation-promoting and inhibitory factors. Although much is known about actin assembly, the physiologic functions of inhibitory proteins are unclear. We generated coronin 1-/- mice and found that coronin 1 exerted an inhibitory effect on cellular steady-state F-actin formation via an Arp2/3-dependent mechanism. Whereas coronin 1 was required for chemokine-mediated migration, it was dispensable for T cell antigen receptor functions in T cells. Moreover, actin dynamics, through a mitochondrial pathway, was linked to lymphocyte homeostasis.