Contrasting the ability of data to make inferences regarding dispersal: case study of the Red-cockaded woodpecker (Picoides borealis)

Dispersal is a critical biological process that contributes to the persistence of species in complex and dynamic landscapes. However, little is known about the ability of different types of data to reveal how species interact with landscape patterns during dispersal. Further, application of process-based, landscape-scale models able to capture the influence of land use and climate change are limited by this lack of dispersal knowledge. Here we highlight a method for building such models when dispersal parameters are unknown, but information on the mating system and survival are available. We applied a common statistical framework, rooted in information theory, to contrast the ability of abundance, movement, and genetic data to estimate dispersal parameters for endangered Red-cockaded woodpecker (RCW), using an individual-based, spatially-explicit population model. Dispersal was modeled as a multifaceted process in which foray distance, long-distance dispersal, competition for mates, and landscape permeability were treated as uncertain. We found that movement data are three-times more powerful than abundance data collected at the same spatial and temporal scales. However, habitat occupancy data collected over much a shorter time scale but at regional spatial scales were very effective for estimating dispersal. We also found that one-year of abundance data provided a similar reduction in uncertainty as genetic differences among breeding groups estimated using a 24-year pedigree. Substituting population genetic data for movement and abundance data often led to the same parameter values, but not always. Our study highlights important differences in the information content of data commonly collected in the field.     

Mycobacterium bovis cultured from commercially pasteurized cows' milk: laboratory cross-contamination

The ability of Mycobacterium paratuberculosis to survive the commercial pasteurization process of raw milk remains controversial. In a study undertaken in Venezuela to culture M. paratuberculosis from commercially pasteurized cows' milk, 83-200 ml containers of milk were processed and cultured on Herrold's egg yolk slants. No M. paratuberculosis was cultured but a total of six colonies of Mycobacterium bovis were isolated from one container each from two different milk providers. Because laboratory cross-contamination was suspected, the laboratory records were reviewed and spoligotyping was carried out on the isolated individual colonies. On the day before these milk specimens were processed, the biological safety cabinet had been used for the isolation of M. bovis from lymph nodes from infected cattle. Spoligotyping showed that that the colonies isolated from the milk all had the same pattern as the strains isolated from the lymph nodes that were processed the previous day. As far as we know, this is the first report of cross-contamination in a veterinary mycobacterial laboratory. False-positive cultures in the mycobacterial laboratory are not rare. In this setting M. bovis was isolated because it is the most common manipulated organism in this laboratory. We believe that reports on the isolation of M. paratuberculosis from commercially pasteurized milk should exclude cross-contamination before reporting, especially when this organism is routinely isolated from animal material in the same lab.     

Detecting<Emphasis Type="Italic">Orobanche</Emphasis> species by using cpDNA diagnostic markers

Some species of the genusOrobanche are among the most devastating parasitic weeds, causing extensive damage in agricultural fields. Considering the difficult control due to seed longevity in the soil, small seed size, high fecundity and a subterranean phase that allows them to parasitize the host before they emerge and become evident, the development of diagnostic markers is highly recommended. In our study we identified potential molecular diagnostic markers from the plastid genome in order to distinguish among the most importantOrobanche species attacking crops in Andalusia, the southern region of the Iberian Peninsula. The study has consideredO. crenata, O ramosa andO. cumana causing serious losses in legumes, solanaceous crops and sunflower fields, respectively, andO. minor that, although abundant in Andalusia, has to our knowledge not yet been found parasitizing agricultural hosts. We amplified a non-coding region from the plastid genome, studied sequence differences among the amplified fragments and digested those of the same length with selected restriction enzymes. Here, we propose a molecular protocol to distinguish the main parasitic plants in crop fields of southern Spain. Different applications such as identification ofOrobanche seeds in soil or crop seed lots are discussed in order to offer right crop recommendations or to prevent new infestation of parasite-free fields. Recommendations for further development of these diagnostic markers are also considered. http://www.phytoparasitica.org posting Jan. 15, 2007.     

Dendrometric and dasometric analysis of the bushy biomass in Mediterranean forests

The aim of this study was to define the dendrometric and dasometric parameters of five Mediterranean bushy plant species, to make their environmental assessment and to determine correlations with LIDAR data. The species studied were: Quercus coccifera, Rosmarinus officinalis, Ulex parviflorus, Cistus albidus, and Erica multiflora. We calculated the global form factor for each species so as to be able to determine the volume of the plants by measuring their base diameter and length. The model volume closest to the real volume was the cylinder, which had form factor values of between 0.8 and 2.33. We also studied the evolution of the moisture content of the vegetation after cutting. The initial values were from 20 to 30%, with a dry density of 1 t/m³. We defined an occupation factor to determine the relationship between the real volume occupied by the plants in an area and a model volume (hemisphere, paraboloid, cone, and cylinder). The occupation factor was similar for the five species studied in dm³ of material per m³ of (model) apparent volume: 3.5 dm³/m³ for the cylinder; 12.5 dm³/m³ for the cone; 8.5 dm³/m³ for the paraboloid; and 14.5 dm³/m³ for the hemisphere. These factors enabled us to calculate the biomass contained in an apparent volume of bushes (including materials and hollows) by density. The prediction models tested in this study will thus serve to determine the biomass of a bushy forest area when the Canopy Height Model (CHM) is calculated from LIDAR data.     

Effect of new ethyl and methyl carbamates on Rhipicephalus microplus larvae and adult ticks resistant to conventional ixodicides

The effects of six new synthetic carbamates on fully engorged females of four Rhipicephalus microplus strains (one reference strain susceptible to conventional ixodicides, two strains multiresistant to ixodicides and one tick field isolate) were compared. In addition, the effect of two other new synthetic carbamates was tested on larvae from the same strains. The first six tested carbamates reduced egg laying and inhibited egg hatching in the four studied strains (P < 0.05). Compared with untreated females, the eggs produced by the treated engorged female ticks of all strains had a dark, dry, opaque appearance and were less adherent. The remaining two tested carbamates induced larval mortality in all of the evaluated strains. The three studied R. microplus strains displayed 50% resistance ratios (RR₅₀) of less than 2 when compared to the susceptible reference strain. These results demonstrate that both carbamates with a larvicidal effect and carbamates that inhibit egg laying and embryo development are efficacious against tick strains that are resistant to commercial ixodicides, no cross resistance was observed.     

Vegetative propagation of the carrageenophytic red alga Gigartina skottsbergii Setchell et Gardner: Indoor and field experiments

The carrageenophytic red alga Gigartina skottsbergii presents several biological constraints for its cultivation such as restricted temporal availability and high spore mortalities that affect the development of its mass cultivation. For this reason, research to develop alternative propagation methods has been undertaken. Previous laboratory studies demonstrated that manipulating temperature, light and nutrients could enhance healing and regeneration of this seaweed. In this study nursery and field experiments were undertaken to establish the possibility to regrow G. skottsbergii in conditions similar to those applied in mass cultivation practices. Frond fragments and rhizoids were tested as alternative ways to obtain new plants. Our results indicate that regeneration occurs in the field, and can be managed in nursery conditions. The addition of a nitrogen source enhances the growth from 0.6 to 1.0% d^− 1 of the healed fragments and the use of a photon flux density above 50 μmol m^− 2 s^− 1 increases the growth rate but decrease the survival of the explants. Explants can be transferred to field conditions and grow at similar rates to those registered in the nursery (0.5% d^− 1). It is also possible to propagate rhizoids of G. skottsbergii and it seems that the attachment of a frond portion to the substratum, enhanced its survival and regeneration capacity. Finally, this study demonstrated that rhizoids attached to rocks can regenerate complete plants in nature, a feature which could be a useful for developing a sustainable harvesting methodology.     

The potential of temporary shelters to increase survival of the endangered Mexican axolotl

1. Amphibian populations worldwide are in decline. Proactive conservation techniques such as translocations into created and restored wetlands have gained popularity in recent years but may fail owing to high predation and low environmental adaptability.
2. The Mexican axolotl (Ambystoma mexicanum), affected by rapid urbanization, is now possibly extinct in the wild despite millions living in captivity throughout the world.
3. The aim of this study was to explore whether ponds from an artificial wetland can function as temporary shelters for a viable population of axolotls that could be re-introduced into their native ecosystem in Xochimilco once it is restored.
4. Egg-laying and hatching of 11 unique axolotl pairs placed into reproductive enclosures and larval survival to 7 weeks and up to 12 months were examined. Physicochemical and biological parameters were estimated and compared among ponds.
5. The results from this study are encouraging as they suggest that two ponds have adequate conditions for axolotls to reproduce and for larvae and juveniles to survive.

     

Studies on the Nutrition of Spotted Sand Bass Paralabrax maculatofasciatus: Effect of the Dietary Protein Level on Growth and Protein Utilization in Juveniles Fed Semipurified Diets

Two feeding trials were conducted to determine the digestibility of a casein-based semi-purified diet and the effects of different protein levels on growth and protein use of spotted sand bass Paralabrax maculatofasciatus juveniles. For trial I, a semipurified diet with vitamin-free casein as the sole source of protein was fed three times a day to apparent satiation, for a period of 20 d. Feces were collected by siphoning each tank. The digestibility of the experimental diet was high: 97% for protein, 89% for lipids, and 84% for gross energy, whereas that of organic matter was 78%. For trial II, seven diets were formulated using vitamin-free casein at graded levels (25, 30, 35, 40, 45, 50, and 55% protein). Triplicate tanks for each dietary treatment were stocked with fish and fed by hand three times a day to apparent satiation for 6 wk. Perfomance of fish fed the different diets was evaluated for survival, percent weight gain, specific growth rate, feed conversion ratio, and protein efficiency ratio. Survival was 100% for all treatments. Growth of spotted sand bass juveniles increased as the dietary protein increased, but no evidence of reaching a plateau was found. The daily feed intake values showed an inverse relation to the protein content of the diets. The feed conversion ratio did not differ among diets containing 40% protein or greater. The results indicate that spotted sand bass juveniles with 2.5-g mean weight need at least 55% dietary protein for best growth when casein is the sole protein source. However, in terms of feed conversion ratio, the requirement apparently could be lower.