Assessing genetic diversity in the web blight pathogen <Emphasis Type="Italic">Thanatephorus cucumeris</Emphasis> (anamorph = <Emphasis Type="Italic">Rhizoctonia solani</Emphasis>) subgroups AG-1-IE and AG-1-IF with molecular markers

Web blight, an important foliar disease of dry beans in the Americas, is a challenge to manage. We studied genetic variation of 92 isolates of Rhizoctonia solani subgroups AG-1-IE and AG-1-IF using DNA fingerprinting methods and mycelial compatibility grouping. The isolates were collected over 13 years from bean fields in the Dominican Republic, Honduras and Puerto Rico. Cluster and AMOVA analysis of combined data from two universal rice primers and two internal sequence repeats revealed significant genetic variation among and within populations of both subgroups. Variation was influenced by geographic origin and sampling year for AG-1-IE isolates and geographic origin for AG-1-IF isolates. Mycelial compatibility of paired isolates was mostly scored as incompatible in both subgroups and supported many unique phenotypes. Only two isolates of AG-1-IE displayed mycelial compatibility and DNA fingerprints, suggesting clonal origin. Genetic variation in these AG-1-IE and AG-1-IF isolate populations may explain the lack of durable resistance to web blight reported in dry beans.     

Biodegradability of Disinfectants in Surface Waters from Buenos Aires: Isolation of an Indigenous Strain Able to Degrade and Detoxify Benzalkonium Chloride

Biodegradability of chlorhexidine (CH), triclosan (TC), and benzalkonium chloride (CBA) has been tested in 18 surface water sampling points in the urban area of Buenos Aires. Sampling points were located in both the Reconquista and the Matanza-Riachuelo basins as well as in the La Plata River. High tolerance to the three disinfectants was found and indigenous strains capable of degrading CBA and TC were isolated. Neither tolerance nor biodegradation were correlated with sewage pollution. A strain that degrades CBA was identified as belonging to the genus Pseudomonas using the API20NE system and 16SRNA sequencing. In batch assays, the strain was capable of degrading 100, 200, and up to 500 mg L^?1 of CBA in 10, 25, and 46 h respectively with specific growth rates (μ) of 0.56, 0.30, and 0.14 h^?1. The efficiency of the process was between 99.5–98.0% in terms of compound removal and between 93.8–89.1% in terms of chemical oxygen demand (COD). The detoxification of the compound as a result of the biodegradation was assessed using Pseudokirchneriella subcapitata, Vibrio fischeri, and Lactuca sativa as test organisms.     

Influence of grape maturity and maceration length on color, polyphenolic composition, and polysaccharide content of cabernet sauvignon and tempranillo wines

The aim of this paper was to study how maturity and maceration length affect color, phenolic compounds, polysaccharides, and sensorial quality of Cabernet Sauvignon and Tempranillo wines at three stages of grape ripening. Ripeness increased color extractability, phenolic compounds, and polysaccharide concentrations. Moreover, the proanthocyanidin mean degree of polymerization (mDP) and the percentage of prodelphinidins also increased with maturity, whereas the percentage of galloylation decreased. In general, wines from riper grapes contain higher proportions of skin proanthocyanidins. Color and anthocyanin concentration decreased when the maceration was longer, whereas polysaccharide and proanthocyanidin concentrations did the opposite. It was also detected that the mDP and the percentage of prodelphinidins decreased when the maceration was extended, whereas the percentage of galloylation increased. These data seem to indicate that proanthocyanidin extraction from seeds is clearly increased throughout the maceration time.     

THE IMPACT OF ORGANIC AMENDMENTS ON FOREST SOIL PROPERTIES UNDER MEDITERRANEAN CLIMATIC CONDITIONS

Restoring the native vegetation is one of the most effective ways to control soil degradation in Mediterranean areas, especially in very degraded areas. In the initial months after afforestation, vegetation cover establishment and soil quality could be better sustained if the soil was amended with an external extra source of organic matter. The goal of this study was to test the effect of various organic amendments on select soil properties [soil organic carbon (SOC), pH, and electrical conductivity (EC)] over a 24‐month period. Four amendments were applied in an experimental set of plots: straw mulching (SM), mulch with chipped branches of Aleppo Pine (Pinus halepensis L.; PM), sheep manure compost (SH), and sewage sludge (RU). Plots were afforested following the same spatial pattern, and amendments were mixed with the soil at the rate 10 Mg ha⁻¹. Organic amendments helped maintain SOC over the initial 6 months after the afforestation. However, only the SM and PM treatments had increased SOC values after 24 months. Decreases in EC were found after the addition of SM, PM, and SH amendments. However, RU increased EC values 24 months after the afforestation. Variations in pH values were not sufficient to establish differences among the various treatments. Furthermore, the results show that forest soils with or without organic amendments responded similarly to the seasonal changes in Mediterranean conditions. Copyright © 2014 John Wiley & Sons, Ltd.     

Transformation of organoarsenical species by the microflora of freshwater crayfish

A study of the transformation of arsenic species by the microflora of the freshwater crayfish Procambarus clarkii was carried out. The study of the degradation of AB (arsenobetaine) was performed in aerobic conditions in two culture media (tryptic soy broth and saline medium) at two temperatures (30 and 8 degrees C). The microflora transformed AB into TMAO (trimethylarsine oxide), DMA (dimethylarsinate), MA (methylarsonate), and an unidentified compound (U1). The quickest transformations were carried out by microflora from hepatopancreas incubated in saline medium at 30 degrees C. The individualized study of other arsenic species [AC (arsenocholine), TETRA (tetramethylarsonium ion), TMAO, DMA, and MA] was also performed in saline medium. The only transformation observed was of AC into AB. The bacteria possibly responsible for AB degradation were isolated, identified by phenotypic and genotypic methods, and individually assayed for AB transformation. Only isolates allocated to the species Pseudomonas putida were able to metabolize AB.     

Effect of accelerated autolysis of yeast on the composition and foaming properties of sparkling wines elaborated by a champenoise method

Five mutants (obtained by UV mutagenesis) and the parent strain were selected to produce sparkling wines following the traditional or champenoise method. The wines were aged with the yeast for 9 months, with samples being taken each month for analytical and sensory determinations. The wines elaborated with mutant strain IFI473I demonstrated an accelerated release of protein, amino acids, and polysaccharides. An analysis of the secreted polysaccharides revealed that mannose was the major sugar present. The effects of the products released by yeasts on the foaming properties of the wines were determined by both sensory and instrumental analysis. In all cases, the wines elaborated with mutant strain IFI473I showed improved foaming properties as compared to wines fermented without this strain. Similar results were obtained at a decreased aging time of 6 months, thereby confirming the capacity of IFI473I strain to carry out an accelerated autolysis. These results demonstrate that mutant strain IFI473I can significantly reduce production times of high-quality sparkling wines.     

Organophosphorus pesticide residues in Mexican commercial pasteurized milk

A study was conducted to measure residues of 13 organophosphorus (OP) pesticides, widely used as dairy cattle ectoparasiticides or in crops used for animal feed, in homogenized and pasteurized Mexican milk samples. Four different milk brands with high distribution were collected biweekly during a 12 month period (n = 96) in supermarkets. OP pesticide residues were measured by gas chromatography with a flame photometric detector. Approximately 39.6% of the samples contained detectable levels of OP pesticide residues. Eight samples contained residues exceeding established maximum residue limits (MRL), and the OP pesticides present in these samples were dichlorvos (five samples), phorate, chlorpyrifos, and chlorfenvinphos (one sample, respectively). Average residues of 13 OP pesticides measured were below established MRLs ranging between 0.0051 and 0.0203 ppm.     

A rapid method for the determination of chlorine, phosphorus, and sulfur in flours of grains and legumes using wavelength dispersive x-ray flourescence spectrometry

A rapid method for the determination of chlorine, phosphorus, and sulfur in commercial flours of wheat, barley, maize, rice, field bean, and soybean by wavelength dispersive x-ray fluorescence spectrometry has been developed. The flours are strained through a 425 microns sieve, then pelletized and measured. The total analysis time for the quantitation of chlorine, phosphorus, and sulfur is less than 20 min per sample. Calibration is carried out using a standard additions method with mixed standards. The method is accurate and precise, and appears to be adequate for routine analyses.     

Soil Fertility Improvement by Litter Decomposition and Inoculation with the Fungus Mortierella sp. in Avocado Plantations of Colombia

Litter decomposition is a major process in nutrient recycling, despite that few studies have considered this in soil fertility management. The aim of this study was to evaluate the effect of litter decomposition and its inoculation with the fungus Mortierella sp. on soil fertility parameters in Andisols cultivated with avocado cv. Hass. Litterbags containing avocado leaves either uninoculated or inoculated were distributed around the trees. As control litter was not allowed to accumulate on the soil surface. Eighteen months later soil samples were collected just below uninoculated and inoculated litterbags and control sites. Soil pH, potassium, calcium, phosphorus, magnesium, and boron significantly increased with litter and in some sites the increase was higher with inoculation. By contrast, soil aluminum, iron, and manganese were significantly lower in the presence of litter (uninoculated and inoculated), whereas zinc was significantly higher when litter was present.