Comprehensive transcriptional profiling and functional study of lymphangiogenic growth factor in placentome of early-stage pregnant water buffalo

The aim of the present study was to evaluate the expression and localization of lymphangiogenic factors (VEGF-C and VEGF-D), their receptor (VEGFR3) and lymphatic endothelial marker (LYVE1) in buffalo placenta during early pregnancy [EP], and to investigate the functional role of lymphangiogenic growth factors in placental lymphangiogenesis. The mRNA and protein expression of VEGF-C, VEGF-D, their receptor VEGFR3 and LYVE1 showed significant expression in EP1 (29–42 days) and EP2 stages (51–82 days) both in caruncle (maternal part) and cotyledon (foetal part) of the buffalo placenta. Immunoreactivity of VEGF-C, VEGF-D and LYVE1 was observed around the endometrial gland, in lymphatics and trophoblast cells, whereas VEGFR3 mainly localized in lymphatics of the caruncle and cotyledons. Cultured trophoblast cells were treated with VEGF-C/VEGF-D (50, 100 and 150 ng/ml) and combined doses of VEGF-C and VEGF-D (150 ng/ml) each for different time durations (24, 48 and 72 h). The mRNA expression of LYVE1 and PCNA was significantly (p < .001) upregulated with VEGF-C and VEGF-D and combined treatment (@150 ng/ml), as well as significantly downregulating Caspase-3 at 48 and 72 h. Thus, the present study provides evidence that lymphangiogenic factors are expressed in buffalo placental compartments and they may play a significant role in the regulation of placental function in water buffaloes.     

Effect of irrigation on tillering in wheat,triticale and barley in a water-limited environment

Summary The effect of irrigation on tillering and tiller mortality in varieties of wheat (Triticum aestivum and T. durum), triticale and barley was studied under field conditions. Low temperature in the early stages of growth promoted production of tillers whereas increase in temperature during extension growth phase increased tiller mortality. More than 1000 tillers m^–2 were produced with five irrigations but 40% or more died. With limited water availability tiller production was reduced but so was their mortality. Grain yield in wheat and triticale was positively correlated with productive tillers and negatively correlated with the maximum number of tillers produced in wheat and barley grown under limited irrigation conditions. Varieties with a capacity to produce fewer tillers were identified. Some of them proved more stable in yield. No correlation was found between tiller number and grain yield in the frequently irrigated treatment.     

Kinematic-wave model for soil-moisture movement with plant-root extraction

A kinematic-wave model is developed for simulating the movement of soil moisture in unsaturated soils with plants. The model involves three free boundaries. Analytical solutions are derived when the plant roots are assumed to extract moisture at a constant rate and the upstream boundary condition is independent of time. Numerical solutions are the only resort when the moisture extraction and the upstream boundary condition both depend on time.     

A mathematical model for border irrigation II. Vertical and horizontal recession phases

Summary This paper, second in a series of three, develops a mathematical model, using the volume balance approach, to simulate vertical and horizontal recession of border irrigation. An equation is proposed for computing Manning's roughness factor N in both laminar and transitional flow regimes in recession phases. The model has four parameters which can be determined experimentally. Experimental data from ten vegetated as well as nonvegetated borders were used to verify the model. Average difference (AD) between calculated and observed vertical recession times was less than 4.4 min, and between calculated and observed horizontal recession times less than 4.6 min for the ten experimental data sets. Average relative error (ARE) in computed horizontal recession was less than 13% for these data sets. The model was found to be especially accurate for Reynold's number between 1,800 and 2,500.     

An improved Lewis-Milne equation for the advance phase of border irrigation

Summary The Lewis-Milne (LM) equation has been widely applied for design of border irrigation systems. This equation is based on the concept of mass conservation while the momentum balance is replaced by the assumption of a constant surface water depth. Although this constant water depth depends on the inflow rate, slope and roughness of the infiltrating surface, no explicit relation has been derived for its estimation. Assuming negligible border slope, the present study theoretically treats the constant depth in the LM equation by utilizing the simple dam-break wave solution along with boundary layer theory. The wave front is analyzed separately from the rest of the advancing water by considering both friction and infiltration effects on the momentum balance. The resulting equations in their general form are too complicated for closed-form solutions. Solutions are therefore given for specialized cases and the mean depth of flow is presented as a function of the initial water depth at the inlet, the surface roughness and the rate of infiltration. The solution is calibrated and tested using experimental data.Abbreviations a (t) advance length - c mean depth in LM equation - c _f friction factor - c _h Chezy's friction coefficient - g acceleration due to gravity - h(x, t) water depth - h ₀ water depth at the upstream end - i() rate of infiltration - f(x, t) discharge - q₀ constant inflow discharge - S _f energy loss gradient or frictional slope - S₀ bed slope - t time - u(x, t) mean velocity along the water depth - x distance - Y() cumulative infiltration - (t) distance separating two flow regions - infiltration opportunity time     

Past, present and future criteria to breed crops for water-limited environments in West Africa

Asia's Green Revolution of the 1960s and 1970s has largely bypassed West Africa, and “modern” (high-yielding, input responsive) germplasm for staple crops has found comparatively little adoption, except for systems that are have good access to markets and sufficient water resources. It is unlikely, however, that breeding objectives conserving traditional crop characteristics as found in extensive systems would have been more successful. The authors identify systems caught in the agricultural transition from subsistence to intensified, market-oriented production as the most important target for crop improvement, and provide examples of new breeding objectives for cowpea, sorghum and upland rice. In each of these cases, breeders, with the help of physiologists, have developed innovative plant-type concepts that combine improved yield potential and input responsiveness with specific traditional crop characteristics that remain essential during the agricultural transition. In the case of cowpea, dual-purpose varieties were developed that produce a good grain yield due to an erect plant habit, then produce new leaves enabling a second harvest of green foliage. For upland rice systems that are limited by labour (mainly needed to control weeds that abound due to shortened fallow periods), a weed competitive plant type was developed from Oryza sativa × Oryza glaberrima crosses. Lastly, sorghum breeders who had previously deselected photoperiod sensitivity are now re-inserting sensitivity into plants having “modern” architecture, in order to allow for flexible sowing dates while maintaining an agro-ecologically optimal time of flowering near the end of the wet season. The ecophysiological basis of these plant types, their place in current and future cropping systems, as well as the problem of under-funding for their realisation, are discussed.     

Genome-wide association study for spot blotch resistance in Afghan wheat germplasm

Spot blotch (SB), caused by Bipolaris sorokiniana, is a devastating disease of wheat globally, especially in South Asia and South America. Understanding the genetics of resistance to SB is important for developing breeding strategies to improve resistance. A panel of 301 genotypes from Afghanistan was phenotyped over two crop seasons using a mixture of virulent B. sorokiniana isolates and genotyped using DArTSeq to obtain genome-wide markers. Fifty genotypes (16.6%) showed disease scores less than the resistant control. Principal component analysis using the genotypic data clustered the genotypes into five different groups. Among models used for genome-wide association mapping, the multilocus mixed model, and fixed and random model circulating probability unification algorithms were most effective in identifying significant marker-trait associations (MTA). Twenty-five MTAs at p ≤ .001 were identified on chromosomes 1A, 1B, 1D, 2B, 2D, 3A, 3B, 4A, 5A, 5B, 6A, 7A, and 7D, indicating the quantitative nature of resistance to SB. Phenotypic variation explained by these markers ranged from 2.0% to 17.7%, and genomic regions on the chromosomes 1D, 2D, 3A, 3B, 4A, 5A, and 5B coincided with loci identified in previous studies. Three single nucleotide polymorphism (SNP) markers on chromosomes 1B (SNP 1113207) and 5A (SNPs 5411867 and 998276) were significant in both crop seasons as well as in the combined analysis across seasons. Marker 5411867 is close to Vrn-A1, shown to be associated with SB in previous studies. Furthermore, among known SB resistance genes, Sb2 on chromosome 5B was predicted to be significant in this panel.     

Geostatistical and fuzzy clustering approach for delineation of site-specific management zones and yield-limiting factors in irrigated hot arid environment of India

Precision Agriculture - Delineation of management zones (MZs) are needed to manage fields in order to maximize economic return, minimize environmental impact, and improve soil and crop management....     

Agroforestry techniques for the rehabilitation of degraded salt-affected lands in India

The development of appropriate technologies for the judicious use of India's 8.11 million ha of salt-affected lands would give increased food, fodder and fuelwood production. A sizeable portion of the salt-affected lands of the Indo-Gangetic plain have been reclaimed through chemical amendments and are being commercially used for arable farming. However, large areas of salt-affected common lands, village and government lands and waste lands near cities, along railway tracks and roads do not have any productive use. Owing to their sparse vegetative cover such lands are vulnerable to further degradation and can be a source of runoff causing floods, especially where cows congregate. Research at the Central Soil Salinity Research Institute, Karnal has generated agroforestry techniques which could enable the economic exploitation of such marginal lands. This paper deals with various aspects of these techniques, which have been applied to over 50 000 ha by 1994. Based on eight to ten years of growth and biomass figures, the most salt-tolerant woody species identified were: Prosopis juliflora, Acacia nilotica, Casuarina equisetifolia, Tamarix articulata, Leptochloa fusca (a palatable forage grass which was found to be a promising primary colonizer of salt lands). Agronomic practices for the successful establishment of trees such as planting methods, amendment use, irrigation, spacing and lopping schedules are discussed. A Prosopis juliflora-leptochloa fusca silvipastoral model was found to be excellent for fuelwood and forage production and for the amelioration of high pH soils. This system, when followed for little more than four years, reclaims alkali soils to such an extent that normal agriculture crops such as Trifolium alexandrinum and T. resupinatum can be grown successfully. A ridge-trench system of tree planting was found to be helpful in alkali soils, the in situ rainwater conservation it led to assisting biomass production. Eucalyptus tereticornis, Populus deltoides and Tectona grandis based agroforestry were promising for reclaimed salt-affected lands. The short- and long-term effects of various tree plantations on the physicochemical properties of the soil and on soil-water relations are also discussed. Agroforestry options for the development of salt-affected lands found in various agroclimatic zones of India are explored.