A predator unmasked: life cycle of Bdellovibrio bacteriovorus from a genomic perspective

Predatory bacteria remain molecularly enigmatic, despite their presence in many microbial communities. Here we report the complete genome of Bdellovibrio bacteriovorus HD100, a predatory Gram-negative bacterium that invades and consumes other Gram-negative bacteria. Its surprisingly large genome shows no evidence of recent gene transfer from its prey. A plethora of paralogous gene families coding for enzymes, such as hydrolases and transporters, are used throughout the life cycle of B. bacteriovorus for prey entry, prey killing, and the uptake of complex molecules.     

Protein and energy nutrition of brook trout (Salvelinus fontinalis) at optimal and elevated temperatures

The digestible protein (DP) and digestible energy (DE) requirements for maintenance and growth of brook trout (Salvelinus fontinalis) were determined using a factorial model at either optimum (15 °C) or elevated temperature (19 °C). Several key parameters of the factorial model were measured using a series of inter‐related studies. The maintenance requirements for DP and DE were 0.10 gDP kg^?0.69 day^?1 (15 °C) and 0.31 gDP kg^?0.78 day^?1 (19 °C), and 34.86 kJDE kg^?0.84 day^?1 (15 °C) and 46.14 kJDE kg^?0.86 day^?1 (19 °C). The total requirements for DP were 0.10 gDP kg^?0.69 day^?1 + 2.14PG (protein gain) (15 °C) and 0.31 gDP kg^?0.78 day^?1 + 1.98PG (19 °C). The total requirements for DE were 36.86 kJDE kg^?0.84 day^?1 + 1.58EG (energy gain) (15 °C) and 46.14 kJDE kg^?0.86 day^?1 + 1.64EG (19 °C). The partial efficiencies for growth were 0.47 (15 °C) and 0.51 (19 °C) for protein, and 0.63 (15 °C) and 0.61 (19 °C) for energy. Nutrient gain was lower at the elevated temperature; however, feed formulation for brook trout should be adjusted to match changes in nutrient requirements at different culture temperatures. The protein and energy requirements model will be useful for developing commercial feeds and feeding charts for brook trout.     

An introduction to markers, quantitative trait loci (QTL) mapping and marker-assisted selection for crop improvement: The basic concepts

Recognizing the enormous potential of DNA markers in plant breeding, many agricultural research centers and plant breeding institutes have adopted the capacity for marker development and marker-assisted selection (MAS). However, due to rapid developments in marker technology, statistical methodology for identifying quantitative trait loci (QTLs) and the jargon used by molecular biologists, the utility of DNA markers in plant breeding may not be clearly understood by non-molecular biologists. This review provides an introduction to DNA markers and the concept of polymorphism, linkage analysis and map construction, the principles of QTL analysis and how markers may be applied in breeding programs using MAS. This review has been specifically written for readers who have only a basic knowledge of molecular biology and/or plant genetics. Its format is therefore ideal for conventional plant breeders, physiologists, pathologists, other plant scientists and students.     

Effects of lauryl sulphate on egg‐shell quality in laying hens

1. The effect of feeding the detergent, sodium lauryl sulphate at concentrations up to 10 g/kg diet on egg‐shell quality was examined in laying hens at 24, 36 and 48 weeks of age.

2. Lauryl sulphate at 2.5 g/kg or more in the diet significantly increased shell breaking strength, shell thickness and shell weight at 24 and 36 weeks. In 48‐week‐old hens only shell breaking strength was increased significantly. Egg production and egg weight were not affected significantly by lauryl sulphate.

3. Lauryl sulphate might increase these measures of quality by increasing shell deposition and/or shell elasticity.     

Pre‐impoundment stock assessment of two Pimelodidae species caught by small‐scale fisheries in the Madeira River (Amazon Basin – Brazil)

The middle stretch of the Madeira River has supported an intensive commercial fishery for several decades. Developed in an area of rapids and waterfalls, this fishery focuses primarily on catfish stocks, mainly pimelodids. Data from fish landings collected in the years immediately prior to the start in operations of two large hydroelectric dams were used to estimate growth and mortality rates for Pirinampus pirinampu (Spix & Agassiz) and Brachyplatystoma platynemum Boulenger. In addition, stock assessment was carried out for both species, and the results used to evaluate the status of the fishery. Mean population parameters were L_∞ = 80.85 cm (total length), k = 0.52 year^?1, ? = 3.53, A_0.95 = 6 year, M = 0.87, F = 1.41–1.64 and Z = 2.28–2.51 for P. pirinampu; and L_∞ = 95.55 cm (total length), k = 0.28 year^?1, ? = 3.40, winter point = 0.41, A_0.95 = 11 year, M = 0.55, F = 0.16–0.35 and Z = 0.71–0.90 for B. platynemum. Yield‐per‐recruit analysis indicated P. pirinampu was overfished and that the stock of B. platynemum was under‐exploited. Moreover, overfishing of the P. pirinampu stock and the effects of fragmentation caused by the construction of the dam should be monitored.     

The performance of a thermometer screen on an automatic weather station

The performance of a Didcot-type thermometer screen on an Automatic Weather Station and a conventional Stevenson screen were compared, both with each other and against an aspirated Assmann psychrometer. Maximum temperature in the Didcot screen exceeded the conventional screen maximum by up to 1 K on calm, sunny days, and Didcot minimum temperatures were as much as 1.5 K less than the screen minima on still, clear nights; mean temperature discrepancies between screens were + 0.3 and − 0.4 K for maxima and minima, respectively. The apparent psychrometric constant for the Didcot screen was 1.0 mbar K⁻¹ which increased to 1.2 mbar K⁻¹ when u < 2 m s⁻¹ in contrast to the value of 0.799 mbar K⁻¹ frequently used for the Stevenson screen.     

Effect of carazolol on the oestrous behaviour and concentrations of luteinising hormone and steroids in lactating cows during the periovulatory period

Twelve multiparous, cycling, lactating Holstein-Friesian cows were synchronised with prostaglandin F(2alpha) and treated with either 2.5 mg carazolol or saline. There were no differences between the peripheral blood concentrations of oestradiol or progesterone, but in the cows treated with carazolol the periovulatory surge of luteinising hormone was delayed, and oestrous behaviour was expressed later than in the control cows.     

Spatial and temporal analysis of coffee wilt disease caused by Fusarium xylarioides in Coffea canephora

Coffee wilt disease (CWD) caused by Fusarium xylarioides, considered to be a soil-inhabiting fungus, is endemic in several African countries, affecting commercially important coffee species and causing serious economic losses. Coffee wilt disease development in naturally infected Coffea canephora fields at the Coffee Research Institute in Uganda was assessed from April 2001 to March 2006 to generate information about temporal and spatial spread of the disease. Maps of diseased trees were also generated from the data. Semi-variance analysis was performed on the data to show the spatio-temporal structure of disease. Host influence on the spatio-temporal structure was deduced from the distribution pattern of diseased and healthy trees and analysis of variance. Results show that the temporal disease epidemic progress was slow. The disease was found to spread from initial infections to healthy neighbouring trees, resulting in an aggregated pattern. An infected tree could infect up to three healthy trees away, in any direction. Disease foci formed and expanded with time, coalescing but punctuated in spots planted with resistant hosts. There were varying levels of susceptibility among host genotypes, affecting the rates and levels of epidemic development. The implications of the findings to the control of CWD are discussed.