Genetic structure of human populations

We studied human population structure using genotypes at 377 autosomal microsatellite loci in 1056 individuals from 52 populations. Within-population differences among individuals account for 93 to 95% of genetic variation; differences among major groups constitute only 3 to 5%. Nevertheless, without using prior information about the origins of individuals, we identified six main genetic clusters, five of which correspond to major geographic regions, and subclusters that often correspond to individual populations. General agreement of genetic and predefined populations suggests that self-reported ancestry can facilitate assessments of epidemiological risks but does not obviate the need to use genetic information in genetic association studies.     

Complex multicolor tilings and critical phenomena in tetraphilic liquid crystals

T-shaped molecules with a rod-like aromatic core and a flexible side chain form liquid crystal honeycombs with aromatic cell walls and a cell interior filled with the side chains. Here, we show how the addition of a second chain, incompatible with the first (X-shaped molecules), can form honeycombs with highly complex tiling patterns, with cells of up to five different compositions ("colors") and polygonal shapes. The complexity is caused by the inability of the side chains to separate cleanly because of geometric frustration. Furthermore, a thermoreversible transition was observed between a multicolor (phase-separated) and a single-color (mixed) honeycomb phase. This is analogous to the Curie transition in simple and frustrated ferro- and antiferromagnets; here spin flips are replaced by 180° reorientations of the molecules.     

Impact of soil stockpiling and mining rehabilitation on earthworm communities

As key ‘ecosystem engineers’, earthworms improve mineralization of organic matter, plant growth, soil quality, and are an important component of many terrestrial food webs. Under appropriate conditions, they are therefore likely to accelerate the restoration of soil ecosystem function after mining.Conserving naturally occurring populations and facilitating their recolonisation appears as the most efficient way to increase earthworms’ overall effect. The impact of mining activities and restoration measures on New Zealand endemic earthworm communities was tested. Earthworm biomass and diversity were compared in four different habitat types.Mining activities, not surprisingly, are shown here to have a detrimental impact on earthworm communities. Soil stockpiling induces anaerobic conditions at and below a depth of 1 m, where earthworms do not survive. The use of stockpiled soil for vegetation replanting therefore leads to low diversity and low abundance of earthworms. An alternative restoration technique consisting in transferring vegetation and soil units (the vegetation direct transfer) was efficient in preserving earthworm populations with earthworm biomass and diversity not significantly different from those observed in undisturbed areas. Based on these results, we recommend vegetation direct transfer (VDT) to be prioritised whenever it is logistically and economically feasible. When VDT is not applicable, low stockpiles should be prioritised as they will comprise a higher proportion of good quality soil (at the surface) and a lower proportion of anaerobic and compacted soil (below 1 m depth at the studied site).     

A rapid and simple method for determining fungicide resistance in Botrytis

A simple test based on the germination of conidia of Botrytis on agar media augmented with various fungicides has been developed. Average concentrations causing a 50% reduction of germ-tube growth (EC₅₀) of highly sensitive isolates were determined on 1% malt extract agar (thiophanate-methyl 0.090 ppm; iprodione 0.566 ppm; fludioxonil 0.026 ppm; fenhexamid 0.144 ppm), 1% malt extract agar with 100 ppm salicyl hydroxamic acid (QoI fungicides, viz. trifloxystrobin 0.009 ppm; pyraclostrobin 0.013 ppm; azoxystrobin 0.087 ppm), 0.5% yeast extract agar (boscalid 0.069 ppm) and 0.5% sucrose agar (cyprodinil 0.053 ppm). In order to detect different levels of resistance against these various fungicides, two discriminatory concentrations were identified for each compound. A routine assay method was developed in which drops of a conidial suspension harvested directly from diseased plant material or sporulating cultures were incubated on each of 20 different agar media. Because of a very short time-span of 24–48 h between sample collection and evaluation of results, field-specific information on the occurrence, frequency and types of resistance of Botrytis against common botryticides in soft-fruit production may be generated prior to the main fungicide spray season at blossom time.

     

Quantitative und qualitative Veränderungen im A-Horizont von Sandböden nach Umwandlung von Dauergrünland in Ackerland

Quantitative and qualitative changes in soil properties of A- horizons of sandy soils caused by conversion of grassland to arable land Changes in physical soil properties and in soil organic matter of the A-horizons due to the conversion of permanent grassland to arable land are quantified and described as a function of time for sandy soils. The study was carried out in an area northeast of Hannover. A decrease of about 100 t/ha C_org (- 57%), 5 – 6 t/ha N_org (- 58%) and 1 t/ha S_t (- 58%) was measured for a period of 2 – 4 years after grassland conversion. Thereby the quality of the soil organic matter remains unchanged (no changes of the C/N ratio and of the distribution of N_org in 5 N-fractions). However, an increase of soil bulk density from 1.0 to 1.3 g/cm³ and a decrease of total pore volume from 0.59 to 0.47 were observed. The fast mineralization of soil organic matter in the A-horizon following the conversion of grassland soils results in a temporary heavily increased nitrate input into the groundwater. Furthermore mineralization and leaching of nitrate and sulfate induces an acidification push in the soil by a proton release in the order of 350 keq/ha during a 2 – 4 years period. However, this proton production is compensated quantitatively by several applications of lime or marl by farmers and by the buffering of bases cations released from mineralized soil organic matter.     

Natürlicher gehalt und anthropogene anreicherung von Schwermetallen in den Sedimenten von Elbe, Eider, Trave und Schwentine

The sediments of four rivers in Northern Germany were analysed for heavy metals. 371 sediment samples were taken from 24 investigation sites of the rivers Elbe, Eider, Trave and Schwentine and from North Sea tidal flat areas. Within each investigation site strong positive relationships exist between the heavy metal contents and the contents of the fine size fractions < 2 μm and < 20 μm of the sediments. To compare the metal contents in the sediments from different areas, differences in grain size were eliminated by computing the metal contents for a clay content of 25% by means of regression equations.The fluvial sediments at a few inland investigation sites, as well as the tidal flat sediments are not detectably polluted with heavy metals. Their metal contents could be used as background values for computing enrichment factors of polluted fluvial deposits.Sediments from the river Elbe in and upstream of the port of Hamburg, and from some parts of the rivers Eider and Trave near industrial and densely populated districts, are highly enriched with heavy metals. The highest enrichment factors are for Hg 85, Cd 56, Pb 37, Cu 34, Zn 29, As 19, Cr 6, Ni 4 and Co 3 times the background values.The ecological importance of the heavy metal contents in the sediments is discussed.     

Simplified N fertilization strategies for winter wheat. Part 1: plants: compensation capacity of modern wheat varieties

ABSTRACT

Winter wheat in northwestern Europe is often fertilized with several doses of calcium-ammonium-nitrate (CAN). For economy, farmers fertilize using a combination of N-doses. Here, we examined the necessity of N splitting (1–3) and application timing in experiments conducted in 2010 using a one-factorial fully randomized block design, and in 2011–2012 using a two-factorial split-plot design (four replicates). The study site, in southwestern Germany, had silty loam soil, and modern cultivars (2010: one cultivar, 2011–2012: three cultivars) with different genetic abilities to develop the yield components of interest were tested. A late first or single N application at stage BBCH 29/31 did not lead to differences in grain yields or protein contents compared to three N applications. However, a single N application at stage BBCH 25/27 resulted in a reduced protein content. Yield component development did not significantly differ among the cultivars. Early N application increased plant density but not yield. In two years, low plant densities were compensated by higher numbers of kernels per spike. Hence, under the tested conditions, the number of N applications could be reduced, as the high compensation ability of modern cultivars allows N fertilization consisting of two or even one application.     

Importance of reservoirs for the conservation of freshwater molluscs in a tropical urban landscape

Freshwater species and ecosystems are gravely imperiled, particularly within urban landscapes of tropical Asia. In one of the region’s most urbanized landscapes (i.e., Singapore), we determined: (1) the importance of six different habitats (i.e., catchment reservoirs, estuarine reservoirs, forest streams, rural streams, ponds and monsoon canals) for conserving the diversity of freshwater molluscs; (2) key environmental factors (e.g., pH) affecting molluscan distribution; (3) important biogeographical determinants (e.g., area) of molluscan richness within each habitat; and (4) the habitat affinities of introduced species. High sampling saturation was achieved at most study habitats with minimal sampling effort, suggesting that the utilization of molluscs as bioindicators can expedite freshwater conservation initiatives. Estuarine reservoirs (6.0 ± 2.0) had the highest molluscan richness, vis-à-vis catchment reservoirs, forest streams, rural streams, ponds and monsoon canals (3.0 ± 1.5; 0; 3.3 ± 2.0; 1.8 ± 0.5 and 3.5 ± 0.5 respectively). Both reservoir types possessed species compositions distinct from other habitats and contained majority (76%) of the sampled species. Reservoirs therefore serve to conserve the bulk of local freshwater malacofauna, especially if they are maintained at near-neutral pH levels (i.e., ∼7.3) and contain large substrates (i.e., rocks). Area was the best predictor of molluscan richness across all habitats, implying that larger freshwater habitats require higher conservation priorities than smaller ones. Introduced (non-native) species (e.g., Pomacea canaliculata) had high affinities for reservoirs, which are in need of monitoring to curb population expansions. The interminable growth of human settlements urgently requires a reconciliatory approach, which includes the ecologically-sound design and management of modified habitats to complement reserves in sustaining native freshwater species.     

Microbial activities in a histosol: Effects of wood ash and NPK fertilizers

Mineralization of organic matter and microbial activities in an intensively cultivated acid, N-rich peat soil planted with Salix sp. cv. aquatica were examined for 3 yr. The soil was amended with wood ash or NPK fertilizers providing N as ammonium nitrate or urea. The wood ash amendment (10 tons ha^?1) increased soil pH from 4.6 to 5.5 and increased markedly all microbial activities measured, resulting in increased mineralization and N availability, and in loss of 9% total soil N during the first year. The addition of ammonium nitrate caused a corresponding though less pronounced increase in N mineralization. Cellulose decomposition increased in all amended soils, reaching rates 53–86% higher than in non-amended soil. Potential N₂ fixation (C₂H₂ reduction) by free-living organisms was increased by the ash-amendment. Potential denitrification rates were positively correlated (r = 0.98) with the presence of water-soluble organic-C, which was more abundant in ash-amended and non-amended soils than in the soils fertilized with N.