Towards a lower prevalence of Oestrus ovis infections in sheep in a temperate climate (south west France)

Oestrus ovis larvae are obligatory parasites of the nasal and sinus cavities of sheep and goats. In the temperate climate of western Europe, fly attacks occur between May and October and the first stage larvae arrest their development within the host between October and February. Oestrosis clinical signs such as nasal discharge and sneezing are well known by sheep breeders in southwest France. According to veterinarian recommendations, most of them treat their animals with long lasting fasciolicides once a year at least, mainly during the fly activity period and at the beginning of the hypobiotic period (when the parasitic population is only constituted of larvae). The consequences of these therapeutic programs were analysed in a local slaughterhouse by larval counts. Both prevalence and intensities of O. ovis infections decreased between 1989-1991 (before the use of systematic treatments) and 1996-1998 (after the spread of these treatments). The use of systematic treatments during the fly activity period and the beginning of the hypobiotic period seems to be very efficient in O. ovis control and could theoretically lead to a possible 'eradication' program as with cattle hypodermosis. Nevertheless the presence of parasites in apparently healthy goats, the possibility for a fly generation to develop before the first treatment in July-August and the succession of several fly generations all around the year in southern Mediterranean and tropical countries will maintain O. ovis infections. Furthermore, there are increased concerns about drug residues on consumer health and environment and this is the basis for the prospect of alternative strategies in O. ovis control.     

Molecular and Pathogenicity Characteristics of Phytophthora nicotianae Responsible for Root Necrosis and Wilting of Pepper (Capsicum annuum L.) in Tunisia

Isolates of Phytophthora from pepper, produced in Tunisia, were characterised according to molecular and pathogenicity criteria. Polymerase chain reaction amplification of the ITS1 region in the ribosomal DNA resulted in different sized fragments. The pepper isolates and P. nicotianae yielded a fragment of 310bp that distinguished it from P. capsici with a fragment of 270bp. The ribosomal RNA gene amplicons of both internal transcribed spacers and the 5.8 S of the pepper Phytophthora and P. nicotianae were digested with 8 endonucleases. The patterns generated, with the 2 enzymes that cut, were identical for both taxa. This molecular analysis corroborated the morphological and biological characteristics and suggests strongly that the isolates of Phytophthora from pepper belong to the species P. nicotianae. Inoculation of pepper, tomato, eggplant and tobacco plants with the isolates of P. nicotianae from pepper showed they were highly pathogenic on pepper but not on tobacco, while their pathogenicity was weak on tomato and eggplant and was associated with atypical symptoms not observed in the field. These pathogenicity tests suggest that pepper isolates of P. nicotianae are particularly adapted to their host and may thus constitute a forma specialis of P. nicotianae.     

Comparison of ammonia and greenhouse gas emissions during the fattening of pigs, kept either on fully slatted floor or on deep litter

Five successive batches of fattening pigs were raised, each during a four month period, on a totally concrete slatted floor in one experimental room and on straw based deep litter in another. The rooms were automatically ventilated to maintain a constant ambient temperature. Available floor space was of 0.75 m² per pig kept on the slatted floor and 1.20 m² per pig kept on the deep litter. With this last system, about 46 kg of straw were supplied per pig throughout a fattening period. The slurry pit was emptied and the litter removed after each batch. Once a month, the emissions of ammonia (NH₃), nitrous oxide (N₂O), methane (CH₄), carbon dioxide (CO₂), and water vapour (H₂O) were measured continuously for 6 consecutive days by infra-red photoacoustic detection.The performance of the animals was not significantly different according to the floor type.Gaseous emissions from pigs raised on the slatted floor and on the deep litter were, respectively, 6.2 and 13.1 g per pig per day for NH₃, 0.54 and 1.11 g per pig per day for N₂O, 16.3 and 16.0 g per pig per day for CH₄, 1.74 and 1.97 kg per pig per day for CO₂ and 2.48 and 3.70 kg per pig per day for H₂O. Except for the CH₄ emissions, all the differences were significant (P < 0.001). Thus, pig fattening on deep litter releases nearly 20% more greenhouse gases than on slatted floor, with 2.64 and 2.24 kg of CO₂-equivalents, respectively (P < 0.001). Whatever the floor type, emissions increased from the beginning to the end of the fattening periods by about 5 times for NH₃, 4 times for N₂O, 3 times for CH₄ and 2 times for CO₂ and H₂O. Correlation coefficients between CO₂-emissions and H₂O, NH₃ and CH₄ emissions were, on average for both floor types, 0.82, 0.77 and 0.74, respectively.Although rearing pigs on straw generally has a good brand image for the consumer, this rearing system produces more pollutant gases than keeping pigs on slatted floors.     

Fragrance heritability in Hybrid Tea roses

Most of the Hybrid Tea roses that are sold as cut flowers are non-scented, despite the long-standing interest of the perfume industry to rose scent. In the absence of comprehensive knowledge on the genetic and biochemistry of volatile biosynthesis in roses, we decided to characterize a Hybrid Tea progeny obtained from parents that emit very different scents. First, we identified the 11 most abundant volatile compounds synthesized by the progeny, and a short review is given for each one that describes their occurrence in the genus Rosa, in the parents and the studied progeny. We have then used statistical analysis on the distribution of volatiles among individual progeny members to unveil the laws of segregation of the scent traits in this cross. As a general rule, the quantity and quality of volatile compounds was lower in the progeny members. Variations in scent quality were mostly linked to the quantity of monoterpenes that was present. Offsprings emitting a pleasant fragrance were, in practice, found to be rare.     

Comparing apparent electrical conductivity measurements on a paddy field under flooded and drained conditions

Every growing season, paddy fields are kept both flooded and drained for a significant period of time. As a consequence, these soils develop distinct physico-chemical characteristics. For practical reasons, these soils are mostly sampled under dry conditions, but the question arises how representative the results are for the wet growing conditions. Therefore, the apparent electrical conductivity (EC_a) of a 1.4 ha alluvial paddy field located in the Brahmaputra floodplain of Bangladesh was measured in both dry and wet conditions by a sensing system using the electromagnetic induction sensor EM38, which does not require physical contact with the soil, and compared both surveys. Due to the smooth water surface under wet conditions which ensured increased stability of the sensing platform, the results of the survey showed considerably reduced micro-scale variability of EC_a. Furthermore, the wet survey results more reliably furnished soil-related information mainly due to the absence of soil moisture dynamics. The differences between EC_a under wet and dry conditions were attributed to differences in soil texture, mainly the sand content variation having considerable effect on soil moisture differences when flooded following drainage. Accordingly, the largest differences between EC_a under wet and dry conditions were found in those parts of the field with a large sand content. Hence, the conclusion was that an EC_a survey on flooded fields has an added value to precision soil management.     

CoRoT measures solar-like oscillations and granulation in stars hotter than the Sun

Oscillations of the Sun have been used to understand its interior structure. The extension of similar studies to more distant stars has raised many difficulties despite the strong efforts of the international community over the past decades. The CoRoT (Convection Rotation and Planetary Transits) satellite, launched in December 2006, has now measured oscillations and the stellar granulation signature in three main sequence stars that are noticeably hotter than the sun. The oscillation amplitudes are about 1.5 times as large as those in the Sun; the stellar granulation is up to three times as high. The stellar amplitudes are about 25% below the theoretic values, providing a measurement of the nonadiabaticity of the process ruling the oscillations in the outer layers of the stars.     

Campylobacter from sows in farrow-to-finish pig farms: risk indicators and genetic diversity

Sows have been identified as a source of Campylobacter contamination in piglets. We carried out a one-year study, in 2008, at 53 farrow-to-finish farms in Brittany, France, to determine the proportion of sows excreting Campylobacter. We also determined the genotypes of the Campylobacter isolates. Moreover, Generalized Estimating Equations including repeated effects were used to assess the association between management practices and farm characteristics, and risk of Campylobacter shedding by sows. Per farm, 10 feces samples from sows were collected from selected sites (maternity, service area, gestation area) on the farms. Campylobacter isolates were identified by PCR and typed by PFGE. Campylobacter was detected in 25.1% of the 530 samples from sows, and 67% of the 53 pig farms had at least one positive sample (of 10 taken). All the Campylobacter isolates belonged to the Campylobacter coli species. They displayed a very high level of genetic diversity, also inside farms and few genotypes were common to several farms. Warmer months, large farms, and individual housing for sows were identified as risk indicators of Campylobacter shedding by sows. A short delay between sampling and treatment of the samples should be considered, to improve the detection of the bacterium in the feces samples.     

Improving the design of long-term monitoring experiments in forests: a new method for the assessment of local soil variability by combining infrared spectroscopy and dendrometric data

Key message

Near- and mid-infrared spectroscopy allows for the detection of local patterns of forest soil properties. In combination with dendrometric data, it may be used as a prospective tool for determining soil heterogeneity before setting up long-term forest monitoring experiments.

Context

Forest soils and stands generally exhibit higher spatial heterogeneity than other terrestrial ecosystems. This variability needs be taken into account before setting up long-term forest monitoring experiments to avoid multiple interactions between local heterogeneity and the factors tested in the experiment.

Aims

We hypothesized that raw near- and mid-infrared spectra can be used as an integrated proxy of a large set of soil properties. The use of this method, in combination with dendrometric data, should provide a quick and cost-effective tool for optimizing the design of experimental forest sites.

Methods

We assessed the local soil heterogeneity at 11 experimental sites in oak and beech stands, which belong to a new forest long-term ecological research (LTER) network. We used near- and mid-infrared spectroscopy in soil and litter samples. The spectra were subjected to principal components analyses (PCA) to determine the intra-site variability of the soil and litter layers.

Results

Based on mapped PCA coordinates and basic dendrometric data, it was possible to design the experiment and minimize the interactions between the treatment layout and the tested variables. The method was validated with chemical analyses of the soil. No interaction was detected at the set-up of the experiment between the treatment layout and chemical soil properties (C, N, C/N ratio, pH, CEC, Al, Mg, P₂O₅, Fe, Mn, Na, and K).

Conclusion

Near-infrared (NIR) and mid-infrared (MIR) spectroscopy is a useful tool for characterizing the overall heterogeneity of soil chemical properties. It can be used without any preliminary calibration. In combination with dendrometric data, it provides a reliable method for optimizing LTER plots in different types of ecosystems.