Organic carbon mineralization responses to temperature increases in subtropical paddy soils

Purpose

Understanding organic carbon mineralization and its temperature response in subtropical paddy soils is important for the regional carbon balance. There is a growing interest in factors controlling soil organic carbon (SOC) mineralization because of the potential for climate change. This study aims to test the hypothesis that soil clay content impedes SOC mineralization in subtropical paddy soils.

Materials and methods

A 160-day laboratory incubation at temperatures from 10 to 30 °C and 90% water content was conducted to examine the dynamics of SOC mineralization and its temperature response in three subtropical paddy soils with different clay contents (sandy loam, clay loam, and silty clay soils). A three-pool SOC model (active, slow, and resistant) was used to fit SOC mineralization.

Results and discussion

Total CO₂ evolved during incubation following the order of clay loam > silty clay > sandy loam. The temperature response coefficients (Q ₁₀) were 1.92?±?0.39, 2.36?±?0.22, and 2.10?±?0.70, respectively, for the sandy loam soil, clay loam soil, and silty clay soil. But the soil clay content followed the order of silty clay > clay loam > sandy loam. The sandy loam soil neither released larger amounts of CO₂ nor showed higher temperature sensitivity, as expected, even though it contains lower soil clay content among the three soils. It seems that soil clay content did not have a dominant effect which results in the difference in SOC mineralization and its temperature response in the selected three paddy soils. However, dissolved organic carbon (DOC; representing substrate availability) had a great effect. The size of the active C pool ranged from 0.11 to 3.55% of initial SOC, and it increased with increasing temperature. The silty clay soil had the smallest active C pool (1.40%) and the largest Q ₁₀ value (6.33) in the active C pool as compared with the other two soils. The mineralizable SOC protected in the silty clay soil, therefore, had even greater temperature sensitivity than the other two soils that had less SOC stabilization.

Conclusions

Our study suggests that SOC mineralization and its temperature response in subtropical paddy soils were probably not dominantly controlled by soil clay content, but the substrate availability (represented as DOC) and the specific stabilization mechanisms of SOC may have great effects.     

pH,nitrogen mineralization,and KCl-extractable aluminum as affected by initial soil pH and rate of vetch residue application: results from a laboratory study

Purpose

Initial soil pH determines the direction and magnitude of pH change after residue addition. This study aimed to evaluate the relative importance of initial soil pH and rate of residue application in determining subsequent pH change, nitrogen (N) mineralization, and soil-exchangeable aluminum (Al).

Materials and methods

An incubation experiment was conducted for 102 days on a Plinthudult soil and a Paleudalf soil, where pH gradients were produced after application of direct current (DC). Rates of vetch applications were 0, 5, 15, 30, and 50 g kg^?1 soil.

Results and discussion

Increasing rates of vetch application caused greater increases in soil pH, but no consistent increase in soil pH at higher initial pH range (4.40～6.74), because of nitrification. There was a positive correlation between alkalinity production and the initial soil pH at day 14, while correlations became negative at days 56 and 102. Mineral N accumulated as NH₄ ⁺–N in low pH soils, due to limited nitrification, while NO₃ ^?–N dominated in higher pH soils. Application of vetch decreased KCl-extractable Al, probably because of complexation of Al by organic matter and precipitation of Al as a result of increased pH, reductions in Al concentration increased with increasing rates of vetch application. However, this amelioration effect on Al concentration weakened with time in higher pH soils.

Conclusions

Application of vetch residue can significantly increase soil pH and concentrations of mineral N and reduce exchangeable Al. These amelioration effects are enhanced with increased rate of vetch addition and vary with time depending on the initial pH of the soil.     

Darwinian selection on a selfing locus

The shift to self-pollination is one of the most prevalent evolutionary transitions in flowering plants. In the selfing plant Arabidopsis thaliana, pseudogenes at the SCR and SRK self-incompatibility loci are believed to underlie the evolution of self-fertilization. Positive directional selection has driven the evolutionary fixation of pseudogene alleles of SCR, leading to substantially reduced nucleotide variation. Coalescent simulations indicate that this adaptive event may have occurred very recently and is possibly associated with the post-Pleistocene expansion of A. thaliana from glacial refugia. This suggests that ancillary morphological innovations associated with self-pollination can evolve rapidly after the inactivation of the self-incompatibility response.     

Correction of sickle cell disease in adult mice by interference with fetal hemoglobin silencing

Persistence of human fetal hemoglobin (HbF, α(2)γ(2)) in adults lessens the severity of sickle cell disease (SCD) and the β-thalassemias. Here, we show that the repressor BCL11A is required in vivo for silencing of γ-globin expression in adult animals, yet dispensable for red cell production. BCL11A serves as a barrier to HbF reactivation by known HbF inducing agents. In a proof-of-principle test of BCL11A as a potential therapeutic target, we demonstrate that inactivation of BCL11A in SCD transgenic mice corrects the hematologic and pathologic defects associated with SCD through high-level pancellular HbF induction. Thus, interference with HbF silencing by manipulation of a single target protein is sufficient to reverse SCD.     

DNA from pre-Clovis human coprolites in Oregon, North America

The timing of the first human migration into the Americas and its relation to the appearance of the Clovis technological complex in North America at about 11,000 to 10,800 radiocarbon years before the present (14C years B.P.) remains contentious. We establish that humans were present at Paisley 5 Mile Point Caves, in south-central Oregon, by 12,300 14C years B.P., through the recovery of human mitochondrial DNA (mtDNA) from coprolites, directly dated by accelerator mass spectrometry. The mtDNA corresponds to Native American founding haplogroups A2 and B2. The dates of the coprolites are >1000 14C years earlier than currently accepted dates for the Clovis complex.     

A diverse assemblage of Late Cretaceous dinosaur and bird feathers from Canadian amber

The fossil record of early feathers has relied on carbonized compressions that lack fine structural detail. Specimens in amber are preserved in greater detail, but they are rare. Late Cretaceous coal-rich strata from western Canada provide the richest and most diverse Mesozoic feather assemblage yet reported from amber. The fossils include primitive structures closely matching the protofeathers of nonavian dinosaurs, offering new insights into their structure and function. Additional derived morphologies confirm that plumage specialized for flight and underwater diving had evolved in Late Cretaceous birds. Because amber preserves feather structure and pigmentation in unmatched detail, these fossils provide novel insights regarding feather evolution.     

Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays

Alternative pre-messenger RNA (pre-mRNA) splicing plays important roles in development, physiology, and disease, and more than half of human genes are alternatively spliced. To understand the biological roles and regulation of alternative splicing across different tissues and stages of development, systematic methods are needed. Here, we demonstrate the use of microarrays to monitor splicing at every exon-exon junction in more than 10,000 multi-exon human genes in 52 tissues and cell lines. These genome-wide data provide experimental evidence and tissue distributions for thousands of known and novel alternative splicing events. Adding to previous studies, the results indicate that at least 74% of human multi-exon genes are alternatively spliced.     

Comment on "Age and evolution of the Grand Canyon revealed by U-Pb dating of water table-type speleothems"

Polyak et al. (Reports, 7 March 2008, p. 1377) reported speleothem data leading to their inference that the western Grand Canyon incised much earlier than previously thought. This contradicts several lines of published geological knowledge in the region, hinges upon unjustified hydrogeological assumptions, and is based on two anomalous data points for which we offer alternative explanations.     

The impact of the pull of the recent on the history of marine diversity

Up to 50% of the increase in marine animal biodiversity through the Cenozoic at the genus level has been attributed to a sampling bias termed "the Pull of the Recent," the extension of stratigraphic ranges of fossil taxa by the relatively complete sampling of the Recent biota. However, 906 of 958 living genera and subgenera of bivalve mollusks having a fossil record occur in the Pliocene or Pleistocene. The Pull of the Recent thus accounts for only 5% of the Cenozoic increase in bivalve diversity, a major component of the marine record, suggesting that the diversity increase is likely to be a genuine biological pattern.