Metapopulation dynamics and threatened species management: Why does the broad-toothed rat (Mastacomys fuscus) persist?

Many species that exist patchily across the landscape are declining due to incremental losses of their constituent sub-populations and increasing isolation of those that remain. For threatened species with such patchy metapopulation structure, it is particularly important to identify key habitat patches and understand what factors govern their occupancy so that their management can be targeted and effective. In this paper, we describe the spatial and temporal distribution of an endangered population of broad-toothed rats (Mastacomys fuscus) at Barrington Tops, New South Wales, and model its dynamics using metapopulation theory. The study population occurs patchily in swamps on the Barrington Plateau. Using faecal pellet searches, live-trapping and data from previous surveys, we identified 12 swamps where M. fuscus persists and 13 where there has been a history of colonisation and extinction. The species now appears to be entirely absent from seven of these latter swamps. Using logistic regression and model selection procedures, we found the strongest predictor of the presence of M. fuscus to be proximity to the nearest occupied swamp. Persistence declined strongly with swamp isolation, probably due to low success of individuals dispersing through the intervening habitat. These patterns support the interpretation that swamp patches at Barrington Tops contain a functioning but fragile metapopulation of M. fuscus. We predict continued loss of remaining sub-populations in peripheral swamps if current dynamics continue, and recommend research to identify the factors that are limiting dispersal and re-colonisation so that the species’ decline can be slowed and reversed.     

Depth Distributions of Belowground Production, Biomass and Decomposition in Restored Tallgrass Prairie

Grasslands store large stocks of soil organic carbon(SOC) in the subsoil, but our knowledge of belowground processes becomes less robust with depth. Vertically explicit SOC models typically assume that the depth distribution of belowground production follows the depth distribution of belowground biomass, but this assumption has not been tested. In addition to the effects of soil temperature and moisture on decomposition, some vertically explicit SOC models implement an intrinsic decrease in belowground decomposition with depth, yet this effect has rarely been observed empirically. We simultaneously measured the depth distributions of belowground biomass, production, and litter decomposition to assess whether belowground biomass depth distributions were suitable predictors of belowground production and whether belowground decomposition decreased with soil profile depth. We found that live and total(live +dead) belowground biomass was distributed relatively more shallowly than total belowground production, and thus total belowground biomass was a biased predictor of the vertical distribution of belowground production. The depth distribution of live roots 2 mm in diameter was found to be the best predictor of total belowground production depth distribution. Using an intact decay core method,we found that belowground litter decomposition decreased by 49% from 0–10 to 30–40 cm depth, and model-simulated effects of soil temperature and moisture accounted for only 9% of the observed decrease with depth. Vertically explicit SOC models can be improved with more accurate empirical belowground production depth distribution estimates, but depth-specific decomposition rates currently implemented in SOC models are necessary to explain observed decreases in belowground litter decay with depth.     

Exploring ethyl methanesulfonate (EMS) treated cotton (<Emphasis Type="Italic">Gossypium hirsutum</Emphasis> L.) to improve drought tolerance

The Texas High Plains often has extended periods between rainfall events, which can lead to a reduction in the yield and fiber quality of cotton (Gossypium hirsutum L.). It is known that cultivated cotton suffers from low levels of genetic diversity due to the over-use in breeding of similar gene pools, which may hinder breeding for drought tolerance. In this study, for the first time the novel variability or genetic diversity of morphological and agronomic traits possibly created by the chemical mutagen ethyl methanesulfonate (EMS) was evaluated to improve drought tolerance in cotton by traits’ response to different irrigation regimes. EMS is a chemical mutagen that has been shown to cause point mutations in the DNA of many model plants and crop species. Three EMS treated lines were advanced from the M₁ to M₄ generation as bulk-harvested populations. A diverse selection scheme was applied to capture most of the genetic trait-variability or diversity and superior lines in these populations. In 2014–2016 the diversity of these populations was evaluated based on four agronomic and thirteen morphological traits to determine differences in response to multiple irrigation rates. Analyses of these traits showed statistically significant (p?≤?0.05) differences between and within populations when compared to the original non-treated EMS source, with most of the variability being observed in the high irrigation rate. However, none of the EMS treated populations had significantly (p?≤?0.05) better lint yield than the commercial cultivar (control) in 2016. EMS yield performance was possibly constrained by the applied diverse selection scheme of this study. Traits such as total number of bolls, bolls retained at node 7 and below, and those retained between nodes 8 and 12, and bolls retained at node of first fruiting branch may be predictors to improve cotton production (yield) in water limiting environments.     

Association of SNP variants of MHC Class II DRB gene with thermo-physiological traits in tropical goats

Host defense in vertebrates depend on many secreted regulatory proteins such as major histocompatibility complex (MHC) class II which provide important regulatory and effector functions of T cells. Gene polymorphism in the second exon of Capra-DRB gene in three major Nigerian goat breeds [West African Dwarf (WAD), Red Sokoto (RS), and Sahel (SH)] was analyzed by restriction fragment length polymorphisms (RFLP). Four restriction enzymes, BsaHI, AluI, HaeIII, and SacII, were utilized. The association between the polymorphic sites and some heat tolerance traits were also investigated in a total of 70 WAD, 90 RS, and 50 SH goats. Fourteen different types of alleles identified in the Nigerian goats, four of which were found in the peptide coding region (A57G, Q89R, G104D, and T112I), indicate a high degree of polymorphism at the DRB locus in this species. An obvious excess (P?<?0.01) of non-synonymous substitutions than synonymous (dN/dS) in this locus is a reflection of adaptive evolution and positive selection. The phylogenetic trees revealed largely species-wise clustering in DRB gene. BsaHI, AluI, HaeIII, and SacII genotype frequencies were in Hardy-Weinberg equilibrium (P?>?0.05), except AluI in RS goats and HaeIII in WAD goats (P?<?0.05). The expected heterozygosity (H), which is a measure of gene diversity in the goat populations, ranged from 0.16 to 0.50. Genotypes AA (BsaHI), GG, GC and CC (AluI) and GG, GA, AA (HaeIII) appeared better in terms of heat tolerance. The heat-tolerant ability of SH and RS goats to the hot and humid tropical environment of Nigeria seemed better than that of the WAD goats. Sex effect (P?<?0.05) was mainly on pulse rate and heat stress index, while there were varying interaction effects on heat tolerance. Variation at the DRB locus may prove to be important in possible selection and breeding for genetic resistance to heat stress in the tropics.     

Households’ Choices of Fuelwood Sources: Implications for Agroforestry Interventions in the Southern Highlands of Tanzania

Fuelwood is the main source of energy for various household uses in many developing countries; and management of tree resources where it is obtained can be best undertaken when household choice patterns are understood. In this paper, households’ decision to obtain fuelwood for domestic consumption as influenced by household and fuelwood source characteristics is analyzed using a multinomial probit regression model. Data is obtained from 254 randomly selected household drawn from Mbarali district, south-western Tanzania. Results indicate that households are heavily dependent on natural forests for household energy provision and that the choice to obtain fuelwood from the forest, farm or market depends, among other factors on the availability of preferred fuelwood tree species at these sources. Acacia tortilis, Brachystegia spp. and Faidherbia albida are the significantly preferred tree species and hence affect the decision of where to obtain fuelwood. This revelation highlights the pressure applied to surrounding forests as well as to the aforementioned tree species which require immediate management interventions. The gender of the household head and whether the household lives in peri-urban or rural areas also influence choice of fuelwood source. Promotion of tree planting and on-farm management of tree species similar to preferred species found in natural forests is recommended. To the extent that consumer preferences are likely to change over time, further research using panel datasets is necessary to unravel inter-temporal preferences for fuelwood sources.     

Dynamics and Nutrient Release Pattern of Silica Sources in a Typical Entisol of Tropical Humid Region of Kerala

Silicon is considered as a beneficial element for crop nutrition especially for monocots. In order to study the effect of addition of different silica sources on the nutrient release pattern from an Entisol, a laboratory incubation study was conducted with three silica sources viz., sodium silicate, calcium silicate, and potassium silicate each @ 200 ppm and 400 ppm per kilo gram soil. The positive effect of addition of silicates was obvious on soil reaction, available Si, P, K, Ca, and Mg. Release of plant available silicon was the highest at 60th day after incubation (DAI) with potassium silicate @ 400 ppm per kg soil. Sodium silicate @ 200 ppm resulted in the highest exchangeable magnesium concentration at 45th DAI. The result of the study implies the positive influence of silicates on soil acidity as well as on enhancing the availability of phosphorus, potassium, calcium, and magnesium in an Entisol.     

Larval Gulf Coast ticks (Amblyomma maculatum) [Acari: Ixodidae] as host for Hepatozoon americanum [Apicomplexa: Adeleorina].

Laboratory-reared larval Gulf Coast ticks (GCTs) (Amblyomma maculatum) were exposed experimentally and found to acquire Hepatozoon americanum infection while feeding on parasitemic dogs. These ticks supported gamogonic and sporogonic development of the apicomplexan, and oocysts from newly molted nymphs were infectious for a dog. Other nymphs from this cohort that were allowed to feed on a blood-parasite naive sheep molted normally; the resulting adult ticks contained oocysts that were infectious for another dog. Merogonic development of H. americanum in the dogs and the resulting lesions/disease appeared similar, irrespective of whether infectious oocysts were derived from nymphal or adult ticks that acquired infection as larvae. In the system previously known, nymphal ticks acquire infection and adults harbor infective oocysts, which vertebrate hosts ingest. Given that larval A. maculatum can acquire infection and nymphs can harbor viable oocysts as demonstrated by this study, the potential variety of vertebrate hosts that can alternate with GCTs in maintaining an endemic cycle is considerably expanded.     

Infection of African buffalo (Syncerus caffer) and cattle with Theileria parva lawrencei after serial passage in cattle

The infectivity of a Theileria parva lawrencei stabilate, from a stock derived from an African buffalo (Syncerus caffer) in the Serengeti National Park, Tanzania, was investigated. In the first experiment a buffalo and three cattle were inoculated with a stabilate from a stock passaged three times in cattle. All cattle developed fatal theilerial infections. Isolations from the buffalo by tick feeding and cell culture isolation showed that it was infected with T p lawrencei at the time of inoculation, but the second isolation made 19 days after inoculation behaved like T p parva in cattle, developing a high parasitosis, while the third isolation made three months later behaved like T p lawrencei with low parasitosis. It was concluded that two biological types of T parva could exist in a buffalo at one time, but it was not shown that the buffalo had become a carrier of T p lawrencei adapted to cattle. In the second experiment two buffaloes and three cattle were inoculated with T p lawrencei (Serengeti) stabilate which had been passaged six times through cattle and ticks. The two buffaloes had mild theilerial infections and developed serological titres in the indirect fluorescent antibody test, but the cattle had fatal infections. Tick and cell culture isolations of T parva were possible during the clinical reactions of the buffaloes, but no carrier state was demonstrated. Theileria-infected cell lines were established from the buffaloes and the cattle and were examined using monoclonal antibodies against T parva schizonts.(ABSTRACT TRUNCATED AT 250 WORDS)     

Effects of recombinant equine growth hormone on in vitro biomechanical properties of the superficial digital flexor tendon of Standardbred yearlings in training

OBJECTIVE: To determine whether recombinant equine growth hormone (rEGH) would alter the in vitro biomechanical properties of the forelimb superficial digital flexor tendon (SDFT) in exercising young Standardbred horses. STUDY DESIGN: Randomized complete block design. ANIMALS: Twelve Standardbred yearlings. METHODS: Horses were trained for 12 weeks on a high-speed treadmill (10% positive incline). rEGH was administered intramuscularly (IM) daily (10 microg/kg during week 4; 20 microg/kg for weeks 5-9) to 6 horses (treated group), whereas 6 horses (control group) were administered an equivalent daily volume of sterile water IM. At 12 weeks, horses were euthanatized and left forelimb SDFTs were collected and stored (-70 degrees C). A section from the mid-region of the SDFT was held in cryoclamps with a 4 cm interspace distance and distracted at 10 mm/s until failure. The variables evaluated were maximal load at yield and failure, ultimate and yield tensile stress and strain, tendon stiffness, and mode of failure. Data were analyzed using unpaired, two-tailed, Student's t-test. Statistical significance was set at P < or =.05. RESULTS: Yield and ultimate tensile stress were significantly lower in the rEGH-treated horses compared with controls. There was a trend toward increased maximal displacement, increased ultimate tensile strain, and decreased tendon stiffness in rEGH-treated horses compared with controls. Tensile stress and cross-sectional area, and tensile stress and stiffness were significantly correlated at yield and failure points. CONCLUSIONS: rEGH, administered at the manufacturer's recommended dose rates to maturing Standardbred horses in training, does not significantly augment the in vitro biomechanical properties of the forelimb SDFT. CLINICAL RELEVANCE: Administration of rEGH to young horses in training is unlikely to enhance the physiologic adaptation of the SDFT to exercise stress.