Suppression subtractive hybridization and microarray analysis reveal differentially expressed genes in the <Emphasis Type="Italic">Lr39/41</Emphasis>-mediated wheat resistance to <Emphasis Type="Italic">Puccinia triticina</Emphasis>

Wheat leaf rust caused by Puccinia triticina (Pt) is one of the most severe fungal diseases threatening the global wheat production. The use of leaf rust resistance (Lr) genes in wheat breeding programs is the major solution to solve this issue. Wheat isogenic line carrying the Lr39/41 gene has shown a moderate to high resistance to most of the Pt pathotypes detected in China. In the present study, a typical hypersensitive response (HR) was observed using microscopy in leaves of the Lr39/41 isogenic line inoculated with the avirulent Pt pathotype THTT from 48 h-post inoculation. Two Lr39/41 resistance-associated suppression subtractive hybridization (SSH) libraries with a total of 6000 clones were established. Microarray hybridizations were performed on all obtained SSH clones using RNAs extracted from leaves of the Pt-inoculated and non-inoculated Lr39/41 isogenic lines, and leaves of the Pt-inoculated and non-inoculated Thatcher susceptible lines. Differentially expressed clones were analyzed by significance analysis of microarrays (SAM), followed by further sequencing. A total of 36 Lr39/41-resistance-related differentially expressed genes (DEGs) were identified, many of which had been previously reported to be involved in the plant defense response. The expression levels of eight selected DEGs during different stages of the Lr39/41-mediated resistance were further quantified by a qRT-PCR assay. Several pathogenesis-related (PR) and HR-related genes seem to be crucial for the Lr39/41-mediated resistance. In general, a brief profile of DEGs associated with the Lr39/41-mediated wheat resistance to Pt was drafted.     

Alien species of aphids (Hemiptera: Aphididae) found in Serbia,new to the Balkan Peninsula

New alien species of aphids (Illinoia liriodendri (Monell), Wahlgreniella nervata (Gillete), Takecallis arundicolens (Clarke) and Tinocallis takachihoensis Higuchi) have been found for the first time in Serbia. These records are new for the Balkan Peninsula. Data of Ericaphis scammelli (Mason), species recently mentioned in Serbia, are also presented in the text. The species have been found during the last five years at four sites (Belgrade, Zemun, Mladenovac and Bojnik) on five cultivated plants. Ericaphis scammelli is a pest of blueberry and a vector of Blueberry scorch virus. The other four develop colonies on decorative plants: I. liriodendri has been found on Liriodendron tulipifera, W. nervata on Rosa sp., T. arundicolens on Pseudosasa japonica and T. takachihoensis on Ulmus x hollandica. The origin of three of the species (E. scammelli, I. liriodendri and W. nervata) is North America and two (T. arundicolens and T. takachihoensis) have come from East Asia. Their morphology, biology and the damage they inflict are discussed here, as well as their potential economic and environmental threat. Only parthenogenetic viviparous females of all 5 species have been collected. Their biology has not been studied enough in Europe and needs further examination. Original drawings of all species are presented.     

Factors affecting the adoption of agroforestry practices by farmers in Cameroon

This paper presents empirical evidence on the impact of socio-economic factors on the adoption of agroforestry practices in Cameroon. The analysis uses primary farm-level data collected from June to December 1996. Three major provinces of the country were covered, namely Centre, Southwest and Northwest Several agroforestry technologies have been promoted among farmers in the zone, including alley farming, improved fallow, live fencing, cut-and-carry fodder and apiculture. The status of adoption of each agroforestry practice is described and factors that affect adoption identified. These are gender of farmer, household family size, level of education, farmer’s experience, membership within farmers’ associations, contact with research and extension, security of land tenure, agroecological zone, distance of the village from nearest town, village accessibility and income from livestock. Research findings indicate that since factors affecting farmers’ adoption of agroforestry practices differ across techniques, generalisation is to be avoided.     

Estimates of forest biomass in the Brazilian Amazon: New allometric equations and adjustments to biomass from wood-volume inventories

Uncertainties in biomass estimates in Amazonian forests result in a broad range of possible magnitude for the emissions of carbon from deforestation and other land-use changes. This paper presents biomass equations developed from trees directly weighed in open forest on fertile soils in the southern Amazon (SA) and allometric equations for bole-volume estimates of trees in both dense and open forests. The equations were used to improve the commonly used biomass models based on large-scale wood-volume inventories carried out in Amazonian forest. The biomass estimates from the SA allometric equation indicate that equations developed in forests on infertile soils in central Amazonia (CA) result in overestimates if applied to trees in the open forests of SA. All aboveground components of 267 trees in open forests of SA were cut and weighed, and the proportion of the biomass stored in the crowns of trees in open forest was found to be higher than in dense forest. In the case of inventoried wood volume, corrections were applied for indentations and hollow trunks and it was determined that no adjustment is needed for the form factor used in the RadamBrasil volume formula. New values are suggested for use in models to convert wood volume to biomass estimates. A biomass map for Brazilian Amazonia was produced from 2702 plots inventoried by the RadamBrasil Project incorporating all corrections for wood density and wood volume and in factors used to add the bole volume of small trees and the crown biomass. Considering all adjustments, the biomass map indicates total biomass of 123.1 Gt (1 Gt = 1 billion tons) dry weight (aboveground + belowground) for originally forested areas in 1976 in the Brazilian Legal Amazon as a whole (102.3 Gt for aboveground only) at the time of the RadamBrasil inventories, which were carried out before intensive deforestation had occurred in the region. Excluded from this estimate are 529,000 km² of forest lacking sufficient RadamBrasil inventory data. After forest losses of 676,000 km² by 2006 – not counting 175,000 km² of this deforested area lacking RadamBrasil data – the estimated dry biomass stock was reduced to 105.4 and 87.6 Gt (aboveground + belowground and only above-ground). Thus, in 2006 the carbon storage in forested areas in Brazilian Amazonia as a whole will be around 51.1 Gt (assuming 1 Mg dry biomass = 0.485 Mg C). Biomass estimates by forest type (aggregated into 12 vegetation classes) are provided for each state in the Brazilian Legal Amazon.     

Selective sparing of a class of striatal neurons in Huntington's disease

A distinct subpopulation of striatal aspiny neurons, containing the enzyme nicotinamide adenine dinucleotide phosphate diaphorase, is preserved in the caudate nucleus in Huntington's disease. Biochemical assays confirmed a significant increase in the activity of this enzyme in both the caudate nucleus and putamen in postmortem brain tissue from patients with this disease. The resistance of these neurons suggests that the gene defect in Huntington's disease may be modifiable by the local biochemical environment. This finding may provide insight into the nature of the genetically programmed cell death that is a characteristic of the disease.     

Union dyeing of the photografted PET/wool blend fabrics with dimethylaminopropyl methacrylamide

Dimethylaminopropyl methacrylamide (DMAPMA) was grafted onto PET/wool blend fabrics by continuous UV irradiation. Union dyeing of the photografted fabrics was investigated using three reactive dyes of α-bromoacrylamide reactive groups. The influence of grafting yield, DMAPMA concentration, NaCl amount, pH value, and dyeing temperature on the dyeability was evaluated. The dyeability of both PET and wool components was improved significantly by the DMAPMA photografting and successive reactive dyeing. Although the dyeability of the PET component in the blend substantially was improved with higher grafting, equal dyeability between PET and wool was difficult to achieve due to more facile grafting and higher reactivity of the wool component compared with the modified PET component. However, the color fastness of the PET/wool blend fabric was excellent for all three colors. This study may offer a way to achieve union dyeing of PET/wool blend fabrics.     

Value-per-recruit analysis of bighand thornyhead <Emphasis Type="Italic">Sebastolobus macrochir</Emphasis> caught off the Pacific coast of northern Honshu,Japan

The yield-per-recruit (YPR) analysis has been used to assess growth overfishing of exploited fish stocks. Since the ex-vessel price per weight widely depends on the size of the fish, the result of the YPR does not imply the revenue. The value-per-recruit (VPR) analysis, which is an economic expansion of the YPR analysis, was conducted for bighand thornyhead Sebastolobus macrochir caught off the Pacific coast of northern Honshu, Japan. The results showed that, for the current age at first capture (t _c = 3), the current fishing mortality (F = 0.12) was close to the optimum level. However, for the current F, optimum t _c in the VPR model was 8 years and would lead to a 47% increase compared to the current revenue. The maximum YPR was obtained at t _c = 6 years, but the revenue at t _c = 6 only gave a 20% increase in the maximum revenue. The difference was caused by the size dependency of the ex-vessel price per weight. The VPR model would generate fisheries management plans with both economical and biological consideration and would help in making general consensus of fisheries management strategies.