CTLA-4 control over Foxp3+ regulatory T cell function

Naturally occurring Foxp3+CD4+ regulatory T cells (Tregs) are essential for maintaining immunological self-tolerance and immune homeostasis. Here, we show that a specific deficiency of cytotoxic T lymphocyte antigen 4 (CTLA-4) in Tregs results in spontaneous development of systemic lymphoproliferation, fatal T cell-mediated autoimmune disease, and hyperproduction of immunoglobulin E in mice, and it also produces potent tumor immunity. Treg-specific CTLA-4 deficiency impairs in vivo and in vitro suppressive function of Tregs-in particular, Treg-mediated down-regulation of CD80 and CD86 expression on dendritic cells. Thus, natural Tregs may critically require CTLA-4 to suppress immune responses by affecting the potency of antigen-presenting cells to activate other T cells.     

Cytokinin oxidase regulates rice grain production

Most agriculturally important traits are regulated by genes known as quantitative trait loci (QTLs) derived from natural allelic variations. We here show that a QTL that increases grain productivity in rice, Gn1a, is a gene for cytokinin oxidase/dehydrogenase (OsCKX2), an enzyme that degrades the phytohormone cytokinin. Reduced expression of OsCKX2 causes cytokinin accumulation in inflorescence meristems and increases the number of reproductive organs, resulting in enhanced grain yield. QTL pyramiding to combine loci for grain number and plant height in the same genetic background generated lines exhibiting both beneficial traits. These results provide a strategy for tailormade crop improvement.     

6─氨基己酸二聚体水解酶基因在异源宿主中的表达

将起源于黄色菌（Ｆｌａｖｏｂａｃｔｅｒｉｕｍｓｐ．ＫＩ７２）的６─氨基己酸二聚体水解酶（ＥⅡ）基因以质粒ｐＴＳ１２０９为载体，转入假单孢菌ＰｓｅｕｄｏｍｏｎａｓｐｕｔｉｄａＮＴ１１２６中，得到具有ＥⅡ高表达活性转基因株，表明以假单胞菌为宿主进行ＥⅡ酶分子育种的可行性，并为ＥⅡ酶尚处于进化中的推论提供了旁证。     

Oxygen isotopic compositions of asteroidal materials returned from Itokawa by the Hayabusa mission

Meteorite studies suggest that each solar system object has a unique oxygen isotopic composition. Chondrites, the most primitive of meteorites, have been believed to be derived from asteroids, but oxygen isotopic compositions of asteroids themselves have not been established. We measured, using secondary ion mass spectrometry, oxygen isotopic compositions of rock particles from asteroid 25143 Itokawa returned by the Hayabusa spacecraft. Compositions of the particles are depleted in (16)O relative to terrestrial materials and indicate that Itokawa, an S-type asteroid, is one of the sources of the LL or L group of equilibrated ordinary chondrites. This is a direct oxygen-isotope link between chondrites and their parent asteroid.     

Quantitative nested real-time PCR detection of <Emphasis Type="Italic">Verticillium longisporum</Emphasis> and <Emphasis Type="Italic">V. dahliae</Emphasis> in the soil of cabbage fields

Verticillium longisporum and V. dahliae, causal agents of Verticillium wilt, are spreading through the cabbage fields of Gunma Prefecture. Using the V. longisporum-specific intron within the 18S rDNA and differences between ITS 5.8S rDNA sequences in Japanese isolates of V. longisporum and V. dahliae, we developed three quantitative nested real-time (QNRT) PCR assays. The QNRT-PCR quantification of V. longisporum or V. dahliae in cabbage field soil was consistent with the severity of Verticillium wilt disease in those fields. In field trials of resistant cultivar YR Ranpo grown for three seasons in soil infested with the pathogen, disease severity and pathogen density in the soil were significantly reduced in a field moderately contaminated by V. dahliae, but only slightly reduced in a highly contaminated field. These results suggest that continuous cultivation of a resistant cultivar is an effective way to reduce the pathogen population. QNRT-PCR assays provide a powerful analytical tool to evaluate the soil population dynamics of V. longisporum and V. dahliae for disease management.     

Comparison of Bacterial Communities Associated with Microcrustaceans from the Floodwater of a Paddy Field Microcosm: Estimation Based on DGGE Pattern and Sequence Analyses

Bacterial communities associated with five kinds of microcrustaceans ( Tanycypris sp., Moina sp., Mesocyclops sp., Cypretta sp. and Heterocypris sp.) from the floodwater of a paddy field microcosm were examined by the application of denaturing gradient gel electrophoresis (DGGE) to PCR-amplified 16S rDNA products with universal bacterial primers and by sequencing of characteristic DGGE bands. The number of DGGE bands of the associated bacteria was small, indicating the association of specific bacterial members with the microcrustaceans studied, among which Tanycypris sp. showed the smallest number of bands. Principal component analysis (PCA) demonstrated that the community structure of the associated bacteria could be divided into three groups: Podocopida ( Tanycypris sp., Cypretta sp. and Heterocypris sp.), Moina sp. and Mesocyclops sp., and further analysis separated Tanycypris sp. and Heterocypris sp. into different clusters. The duration of the incubation period affected the bacteria associated with Tanycypris sp., Moina sp. and Cypretta sp. only. Nearly all of the associated bacteria belonged to Gram-negative bacteria, especially the Cytophaga-Flavobacterium-Bacteroides (CFB) group. Closest relatives of the DGGE bands common to three Podocopida and Mesocyclops sp. belonged to an invertebrate endosymbiont.     

Carbon cycling in rice field ecosystems in the context of input, decomposition and translocation of organic materials and the fates of their end products (CO2 and CH4)

Rice fields are intensively managed, unique agroecosystems, where soil flooding is general performance for rice cultivation. Flooding the field results in reductive soil conditions, under which decomposition of organic materials proceeds during the period of rice cultivation. A large variety of organic materials are incorporated into rice soils according to field management. In this review, the kind and abundance of organic materials entering carbon cycling in the rice field ecosystem are evaluated first. Then, decomposition of plant residues and soil organic matter in rice fields is reviewed quantitatively. Decomposition of plant residues is shown to be the active process in carbon cycling in rice fields. Rice releases photosynthates into the rhizosphere (rhizodeposition), and they follow a different avenue of decomposition in soil from that of plant residues. Incorporation of rhizodeposition into microbial biomass and soil organic matter during the period of rice cultivation, and their fates after harvesting are evaluated quantitatively from ¹³C pulse labeled experiments. Percolating water transports inorganic and organic carbon from the plow layer to the subsoil layer. The amounts of their transport and accumulation in the subsoil layer are evaluated in relation to the amounts of soil organic C in the plow layer. Not only CO₂ but also CH₄ are produced in the decomposition process of organic materials in flooded rice fields. CH₄ evolution from rice fields is of global concern from the viewpoint of global warming. Origins of CH₄ evolved from rice fields are estimated first, followed by the fates of CH₄ in rice field ecosystems. Rhizodeposition is shown to be the main origin of CH₄ evolved from rice fields. Evolution to the atmosphere is not the sole pathway of CH₄ produced in rice fields. The amounts of CH₄ retained in soil, percolated to the subsoil layer and decomposed in soil are evaluated in the context of the amounts of CH₄ efflux. Thus, this review focuses on carbon cycling in the rice field ecosystem from the viewpoints of input, decomposition, and translocation of organic materials and the fates of their end products (CO₂ and CH₄).