Application of N2/Ar ratio method for N2 fixation studies in submerged soil

Abstract

Recently there has been developments in the measurement of N₂ fixation due mainly to the C₂H₂ reduction method (1). This method, however, has several disadvantages, especially for submerged soil, and the estimated amount of fixed N₂ on the basis of the C₂H₂ reduction activity is not very reliable. The tracer ¹⁵N₂ technique which gives a reliable estimation of the fixed N₂ is too expensive for common use. Development of an alternative method suitable for submerged soil would therefore be desirable. The present authors expected that the measurement of the ratio N₂/Ar in the soil solution might provide advantages for the estimation of the fixed N₂ in submerged soil.     

Methane production and its fate in paddy fields

Abstract

Oxidation of methane and total water soluble organic carbon (TOC) in the subsoil, which percolated from the plow layer, was investigated in a column experiment. The amounts of both methane and TOC in the leachate decreased by percolation in the subsoil.

Fe²⁺ percolated from the plow layer was nearly completely retained in the subsoil. The decomposition of methane and TOC in the subsoil was considered to result in the coupling with the formation of Fe²⁺. Methane was estimated to contribute ca. 19–21% to the total amount of Fe²⁺ formed in the subsoil by the organic materials in the leachate.     

Solubilization of Insoluble Inorganic Phosphate by Hyphal Exudates of Arbuscular Mycorrhizal Fungi

Increased phosphate (P) uptake in plants by arbuscular mycorrhizal (AM) fungi is thought to depend mainly on the extension of external hyphae into soil. On the other hand, it is known that the hyphae of some kinds of ectomycorrhizal fungi release organic acids into soil and that they dissolve the insoluble inorganic P. This study collected hyphal exudates of AM fungi within compartmentalized pot culture and clarified their ability to solubilize insoluble inorganic P. Sterilized Andisol was packed in pots that were separated into root and hyphal compartments with a nylon net of 30 μm pore size. Seedlings of Allium cepa inoculated with AM fungi, Gigaspora margarita, or Glomus etunicatum were grown. Control pots were not inoculated. Mullite ceramic tubes were buried in the soil of each compartment and soil solution was collected. The anionic fraction of the soil solution was incubated with iron phosphate (4 mg FePO₄ in 1 mL of 0.4 acetate buffer). Solubilized P was measured. The AM colonization of plants inoculated with G. margarita and G. etunicatum was 86% and 54%, respectively. Adhesion of external hyphae was observed on the surface of the mullite ceramic tubes buried in soil of the hyphal compartment. Colonization of both fungi increased shoot P uptake and growth. Soil solution collected from the hyphal compartments of both fungi solubilized more P than did that from uninoculated plants. It is suggested that hyphal exudates can contribute to increased P uptake of colonized plants.     

Studies on the boron deficiency in field crops (Part I) boron deficiency symptoms in rape plants

In several areas of Japan, rape plants (Brassica napus) show a boron deficient smyptom, resulting in a seed-maturation obstacle. And in these areas, early supply of boron before transplanting were required⁵,⁶.     

Nitrogen uptake response of crops to organic nitrogen

Sustainability of agriculture became a major issue of global concern during this decade. Agronomic practices aimed at reducing the dependence on inputs such as chemical fertilizers can contribute to sustainability. Nitrogen (N) is the most limiting and commonly applied nutrient for crop production. The development of nutrient-responsive cultivars especially during the past three decades led to an intensive use of N fertilizers in many agricultural systems. Environmental and economic issues associated with such practices have, however, generated an interest in alternative management systems. These include practices such as exploitation of beneficial biological functions (symbiotic nitrogen fixation, etc.) and substitution of chemical fertilizers with farm-generated products.     

Origin and properties of humus in the subsoil of irrigated rice paddies

Stability of humus in the plow layer soil is considered to affect the quantity and quality of dissolved organic matter leached from the plow layer soil. Therefore, a model experiment was conducted to analyze the effect of soil reduction under submerged conditions on the stability of humus in the plow layer soil. The changes in the stability of humus in the plow layer soil during submerged incubations with and without rice straw application were evaluated based on the changes in the binding type of humus. Binding type of humus in the plow layer soil was analyzed by successive extractions of organic matter with water, 0.25 M Na₂SO₄, 0.1 M Na₄P₂O₇ (pH 7.0), 0.1 M Na₄P₂O₇ (pH 10.5), and 0.1 M Na₄P₂O₇ (pH 10.5) with NaBH₄. Amounts of Fe, Mn, and Mg in each fraction were also determined to estimate the relationships between humus and metals.

The successive extraction of humus indicated that the amount of organic carbon which was extractable with the (NaBH₄ +0.1 M Na₄P₂O₇) solution decreased while that of the 0.1 M Na₄P₂O₇ (pH 7.0}-extractable organic carbon increased during submerged incubation with rice straw application. The origin of the increase in the amount of organic carbon in the Na₄P₂O₇ (pH 7.0)-extractable fraction during submerged incubation was investigated further by another incubation experiment using ¹³C-glucose as a reducing agent. Atom- 13C% analysis showed that the contribution of organic carbon derived from compounds other than glucose to the increase in the contents of humic acids and fulvic acids in the Na₄P₂O₇ (pH 7.0)-extractable fractions was ca. 80%. Therefore, it was concluded that the binding type of humus changed from (NaBH₄ + Na₄P₂O₇)-extractable to Na₄P₂O₇ (pH 7.0)-extractable humus under reducing conditions. Since the amounts of organic carbon and Fe increased in the Na₄P₂O₇ (pH 7.0)-extractable fraction and decreased in the (NaBH₄ +0.1 M Na₄P₂O₇)-extractable fraction simultaneously, iron reduction was presumably associated with the change in the binding type of humus in submerged paddy soil.     

Effect of rice straw application on CH4 emission from paddy fields

The effect of rice straw (RS) incorporated at the time of plowing in the previous cr–p season on CH₄ emission from rice paddies was investigated in a pot experiment. Rice straw that incorporated just before transplanting of rice seedlings (June) into a paddy field was collected after the harvest (October) and at the beginning of the next cropping period (May). Methane emission rates from the rice-planted pots with the application of fresh RS, RS collected in October. and RS collected in Mayas well as the pots without RS application were measured using the chamber method. The composition of organic constituents in the three kinds of RS was estimated by the proximate analysis. The cumulative amount of CH₄ emitted during the first 50–d period was lower in the order of the pots with RS collected in May, pots with RS collected in October, and pots with fresh RS. The cumulative amount of CH₄ emitted throughout the rice growth period from the pots with fresh RS and with RS collected in October was significantly larger while that from the pots with RS collected in May did not differ statistically compared with the total CH₄ emission from the pots without RS. These results suggested that there was an overall decrease in the amount of organic constituents in RS based on the large differences in T-C content and similar composition of organic constituents between the fresh RS and RS collected in May. Significant effect of RS continuously applied during the previous cropping period on the increase in CH₄ emission was discussed.     

Impact of fumigation with metam sodium upon soil microbial community structure in two Japanese soils

The effects of fumigation with sodium methyl dithiocarbamate (metam sodium) on the microbial community structure and function in 2 soils were investigated using a variety of techniques. In both soils ca. 50% and 90% of the populations of total and culturable bacteria, respectively, were killed by fumigation, with recovery to levels prevailing in control soils 26 d after cessation of fumigation. The size of the ammonium and nitrite oxidiser populations was reduced by up to 4 orders of magnitude by fumigation, with the latter showing a slight recovery 105 d later. There were substantial changes in the C-utilisation (Biolog GN) profiles in the fumigated soils even 105 d later. The number and pattern of amplified 16S ribosomal DNA restriction analysis (ARDRA) fragments was changed by fumigation, and there was a shift in the %G+C profile toward a greater proportion of lower %G+C classes in treated soils. It appeared that DNA released from killed cells remained for some time after fumigation, and masked the apparent community DNA profiles. This study demonstrates that the effects of fumigation on the soil microbial community structure and function were pronounced and for some parameters very persistent. However, the effects on broad-scale properties such as total or culturable bacterial numbers were less enduring.     

Epibiotic microorganisms associated with microcrustaceans in overlying water of Philippine paddy fields

Epibiotic microorganisms associated with micro crustaceans in the overlying water of Philippine paddy fields were examined by scanning electron microscopy, and their associations were compared with those observed in Japanese paddy fields (Soil Sci. Plant Nutr., 43, 633-641, 651-664, 1997). Various types of microorganisms, including bacteria, protozoa, and algae, colonized microcrustaceans and their kinds and colonizing patterns varied depending on the kinds of microcrustaceans. Common associations between epibionts and respective micro crustaceans were observed in the Philippines and in Japan: e.g., rodshaped bacteria on Cyclopidae and Cypridopsidae; no microorganisms on Simocephalus spp.     

Phospholipid fatty acid composition of microbiota in the percolating water from a rice paddy microcosm

The microbiota in the percolating water from the plow layer soil in paddy fields was studied based on the composition of phospholipid fatty acids (PLFAs) in a pot experiment. The mean concentrations of PLFAs in the percolating water were 17±5 and 11±4 µg L^-1 in the planted and non-planted pots, respectively. The dominant PLFAs in the percolating water were 16: 0, 16: 1ω7c, 18: 1ω7, 18: 1ω9, il5: 0, and ail5: 0 PLFAs in both the planted and non-planted pots. The dominance percentage of 18: 3ω6c and 17: 1ω8 PLFAs increased at the late stage of rice growth in the planted pots. The percolating water from the planted pots contained in a higher percentage of straight mono-unsaturated PLFAs and a lower percentage of branched-chain PLFAs than that from the non-planted pots. Considerable differences in the PLFA composition in the percolating water were observed between the planted and non-planted treatments and with the duration of the growth period. Principal component analysis indicated that the microbiota in the percolating water was derived from the microbiota in the floodwater and in the plow layer soil. Cluster analysis showed that the similarity of the PLFA composition in the percolating water to the PLFA composition in the plow layer soil was higher than that in the floodwater. The stress factor that was estimated from the trans/cis ratio of 16: 1ω7 PLFA was 0.08±0.04 and 0.14±0.05 in the percolating water from the planted and non-planted pots, respectively, which indicated that the degree of stress on the microbiota in the percolating water from the planted pots was low in a similar way to the degree of stress on the microbiota in the floodwater, while the degree in the percolating water from the non-planted pots was similar to that in the plow layer soil, respectively.