Identification of a novel locus Rmo2 conditioning resistance in barley to host-specific subgroups of Magnaporthe oryzae

Barley cultivars show various patterns of resistance against isolates of Magnaporthe oryzae and M. grisea. Genetic mechanisms of the resistance of five representative barley cultivars were examined using a highly susceptible barley cultivar, 'Nigrate', as a common parent of genetic crosses. The resistance of the five cultivars against Setaria, Oryza, Eleusine, and Triticum isolates of M. oryzae was all attributed to a single locus, designated as Rmo2. Nevertheless, the Rmo2 locus in each cultivar was effective against a different range of isolates. Genetic analyses of pathogenicity suggested that each cultivar carries an allele at the Rmo2 locus that recognizes a different range of avirulence genes. One allele, Rmo2.a, corresponded to PWT1, which conditioned the avirulence of Setaria and Oryza isolates on wheat, in a gene-for-gene manner. The other alleles, Rmo2.b, Rmo2.c, and Rmo2.d, corresponded to more than one avirulence gene. On the other hand, the resistance of those cultivars to another species, M. grisea, was conditioned by another locus, designated as Rmo3. These results suggest that Rmo2 is effective against a broad range of blast isolates but is specific to M. oryzae. Molecular mapping revealed that Rmo2 is located on the 7H chromosome.     

Detection and molecular characterization of sugarcane grassy shoot phytoplasma in Vietnam

Sugarcane is an important cash crop in Vietnam and has been widely promoted at national and provincial level. In 2006, a new disease was discovered in sugarcane in the Nghean Tate&Lyle Sugar Mill in Nghean Province in north-central Vietnam. The key symptoms were the formation of green grassy shoots around the base of mature stools. We applied nested polymerase chain reaction (PCR) using P1/P7 and R16F2n/R16R2 for detection and characterization of phytoplasma from the symptomatic tissues. PCR products of the expected size (approx. 1200?bp) were obtained from the 16S rDNA of the phytoplasma. The restriction fragment length polymorphism profiles indicated that all samples were infected by the same phytoplasma. Phylogenetic analysis confirmed that the SCGS phytoplasma from Vietnam belong to the 16SrXI group, formerly Rice Yellow Dwarf group.     

Development of EST-SSR markers of Ipomoea nil

Although Japanese morning glory (Ipomoea nil (L.) Roth.) has been used intensively for genetic studies, DNA markers have not been developed in Ipomoea nil sufficient to cover all chromosomes. Therefore, we conducted microsatellite (simple sequence repeats, SSR) marker development in I. nil for future genetic studies. From 92,662 expressed sequence tag (EST) sequences, 514 unique microsatellite-containing ESTs were identified. Primer pairs were designed automatically in 326 SSRs. Of 150 SSRs examined, 75 showed polymorphisms among strains. A phenogram based on the SSR genotypes revealed the genetic relation among seven Japanese morning glories from five different regions of the world and an ivyleaf morning glory (I. hederacea Jacq.). The developed SSR markers might be applicable for genetic studies of morning glories and their relatives.     

Effects of cortisol on pregnancy rate and corpus luteum function in heifers: an in vivo study

To determine whether glucocorticoids affect the function of the bovine corpus luteum (CL) during the estrous cycle and early pregnancy, we examined the effects of exogenous cortisol or reduced endogenous cortisol on the secretion of progesterone (P4) and on pregnancy rate. In preliminary experiments, doses of cortisol and metyrapone (an inhibitor of cortisol synthesis) were established (n=33). Cortisol in effective doses of 10 mg blocked tumor necrosis factor-induced prostaglandin F(2α) secretion as measured by its metabolite (PGFM) concentrations in the blood. Metyrapone in effective doses of 500 mg increased the P4 concentration. Thus, both reagents were then intravaginally applied in the chosen doses daily from Day 15 to 18 after estrus (Day 0) in noninseminated heifers (n=18) or after artificial insemination (n=36). Pregnancy was confirmed by transrectal ultrasonography between Days 28-30 after insemination. Plasma concentrations of P4 were lower in cortisol-treated heifers than in control heifers on Days 17 and 18 of the estrous cycle (P<0.05). However, the interestrus intervals were not different between control and cortisol-treated animals (P>0.05). Moreover, metyrapone increased P4 and prolonged the CL lifespan in comparison to control animals (P<0.05). Interestingly, in inseminated heifers, cortisol increased the pregnancy rate (75%) compared with control animals (58%), whereas metyrapone reduced the pregnancy rate to 16.7% (P<0.05). The overall results suggest that cortisol, depending on the physiological status of heifers (pregnant vs. nonpregnant), modulates CL function by influencing P4 secretion. Cortisol may have a positive influence on CL function during early pregnancy, leading to support of embryo implantation and resulting in higher rates of pregnancy in heifers.     

Anti-Inflammatory Components of the Starfish Astropecten polyacanthus

Inflammation is important in biomedical research, because it plays a key role in inflammatory diseases including rheumatoid arthritis and other forms of arthritis, diabetes, heart disease, irritable bowel syndrome, Alzheimer’s disease, Parkinson’s disease, allergies, asthma, and even cancer. In the present study, we describe the inhibitory effect of crude extracts and steroids isolated from the starfish Astropecten polyacanthus on pro-inflammatory cytokine (Interleukin-12 (IL-12) p40, interleukin-6 (IL-6), and tumor necrosis factor α (TNF-α)) production in lipopolysaccharide (LPS)-stimulated bone marrow-derived dendritic cells (BMDCs). Among those tested, compounds 5 and 7 showed potent inhibitory effects on the production of all three pro-inflammatory cytokines with IC₅₀ values ranging from 1.82 ± 0.11 to 7.00 ± 0.16 μM. Potent inhibitory activities were also observed for compound 1 on the production of IL-12 p40 and IL-6 with values of 3.96 ± 0.12 and 4.07 ± 0.13 μM, respectively, and for compounds 3 and 4 on the production of IL-12 p40 with values of 6.55 ± 0.18 and 5.06 ± 0.16 μM, respectively. Moreover, compounds 2 (IC₅₀ = 34.86 ± 0.31 μM) and 6 (IC₅₀ = 79.05 ± 2.05 μM) exhibited moderate inhibitory effects on the production of IL-12 p40, whereas compounds 3 (IC₅₀ = 22.80 ± 0.21 μM) and 4 (IC₅₀ = 16.73 ± 0.25 μM) moderately inhibited the production of TNF-α and IL-6, respectively.     

The Contribution of Various Components to pH Buffering Capacity of Acrisols in Southeastern Vietnam

This paper examined the contribution of various soil components to pH buffering capacity (pH_BC) of haplic Acrisols in an upland area of Southeastern Vietnam. Sampling was conducted in 2016 in Tan Bien district, Tay Ninh province at seven sites from the surface to 60-cm depth. Soils were very acidic (pH_H2O 4.53 ± 0.05). The pH_BC were very low, 0.46 ± 0.04 and 0.44 ± 0.05 cmol H⁺ kg^?1 pH^?1, respectively, for original samples and those from which soil organic carbon (SOC, 0.52 ± 0.09%) were removed. The contribution of Al³⁺ to pH_BC was remarkable while that of SOC was of little significance. The contribution of clay minerals to pH_BC was unclear due to the low (9.37 ± 0.76%) and kaolinite-dominated clay content. The current soil conditions indicated a potential for further soil acidification. Liming would be one of the measures to remediate soil acidity in the research area.     

Short-term carbon and nitrogen dynamics in soil,litterfall and canopy of a suburban native forest subjected to prescribed burning in subtropical Australia

Purpose

This study aimed to understand the mechanisms of the variations in carbon (C) and nitrogen (N) pools and examine the possibility of differentiating the burning effects from seasonal and pre-existed N limitations in a native suburban forest ecosystem influenced by prescribed burning in subtropical Australia.

Materials and methods

Soil and litterfall samples were collected from two study sites from 1 to 23 months since last burnt. Soil labile C and N pools, soil C and N isotopic compositions (δ¹³C and δ¹⁵N), litterfall mass production (LM), and litterfall total C, total N, δ¹³C and δ¹⁵N were analysed. In-situ gas exchange measurements were also conducted during dry and wet seasons for Eucalyptus baileyana and E. planchoniana.

Results and discussion

The results indicated that labile C and N pools increased within the first few months after burning, with no correlations with climatic factors. Therefore, it was possible that the increase was due to the burning-induced factors such as the incorporation of ashes into the soil. The highest values of soil and litterfall δ¹⁵N, observed when the study was commenced at the experimental sites, and their high correlations with climatic factors were indicative of long-term N and water limitation. The ¹³C signals showed that soil N concentrations and climatic factors were also two of the main factors controlling litterfall and foliage properties mainly through the changes in photosynthetic capacity and stomatal conductance.

Conclusions

Long-term soil N availabilities and climatic factors were the two of the main driving factors of C and N cycling in the studied forest sites. Further studies are needed to compare soil and litterfall properties before and after burning to profoundly understand the effects of prescribed burning on soil labile C and N variations.

     

Short-term effects of organo-mineral enriched biochar fertiliser on ginger yield and nutrient cycling

Purpose

Biochar has agronomic potential but currently is too expensive for widespread adoption. New methodologies are emerging to reduce the cost such as enriching biochar with nutrients that match crops and soil requirements. However, the effects of biochar-based fertilisers on plant yield and soil nutrient availability have not been widely examined. This study investigated the effects of a novel organo-mineral biochar fertiliser in comparison to organic and commercial biochar fertiliser on ginger (Zingiber officinale Canton).

Materials and methods

There were four treatments: (1) commercial organic fertiliser (5 t ha^?1), as the control; (2) commercial biochar-based fertiliser (5 t ha^?1); (3) organo-mineral biochar fertiliser at low rate (3 t ha^?1); and (4) organo-mineral biochar fertiliser at high rate (7.5 t ha^?1). A replicated pot trial was established with black dermosol soil and ten replicate pots for each treatment. Ginger was planted and grown for 30 weeks. Plant growth, biomass, foliar nutrients and water extractable soil nutrients including phosphorus (P), potassium (K) and calcium (Ca) were examined.

Results and discussion

High rate organo-mineral biochar fertiliser increased soil P and K availability at week 30 (harvest) after planting, compared to all other treatments and low rate organo-mineral biochar fertiliser performed similarly to the organic control for P and K. High rate organo-mineral biochar fertiliser increased total foliar nutrient content at week 30 in P, K and Ca compared to commercial biochar fertiliser. High rate organo-mineral biochar fertiliser improved the commercial value of ginger (+?36%) due to a shift in the proportion of higher grade rhizomes. Low rate organo-mineral biochar fertiliser plants displayed similar yield, total dry and aboveground biomass to commercial organic fertiliser. Commercial biochar fertiliser had significantly lower biomass measures compared with other treatments as the rate applied had lower nutrient concentrations.

Conclusions

Our results show organo-mineral biochar fertilisers could be substituted for commercial organic fertilisers at low rates to maintain similar yield or applied at high rates to increase commercial value where economically feasible.

     

Parasitic infections in dairy cattle around Hanoi, northern Vietnam

In northern Vietnam, dairy cattle are mainly managed in small-scale farms, where animals are kept confined and feeding occurs by cut and carry methods. In the present study the occurrence of parasitic infections was examined in five provinces around Hanoi. A total of 201 farms were visited, and 334 stool and 239 blood samples were collected from calves younger than 3 months, animals between 3 and 24 months and adult cows. Furthermore, 254 milk samples were collected from lactating animals. Coproscopical examination indicated a high prevalence of nematode eggs (Cooperia spp., Haemonchus and Oesophagostomum spp.) in animals (n=176) between 3 and 24 months (66%) and in adult cows (n=90; 54%). In these age groups the prevalence of Fasciola was 28% and 39%, respectively, and for Paramphistomum the prevalence was 78% and 82%, respectively. Fifty percent of the calves younger than 3 months (n=68) were positive for Giardia, and none for Cryptosporidium. Most Giardia isolates were identified as the non-zoonotic G. duodenalis assemblage E on the beta-giardin gene. The blood samples were examined with commercially available Svanovir((R))Elisa's for the presence of Anaplasma marginale and Babesia bigemina specific antibodies, and a prevalence of 28% and 54% was found, respectively. In the milk samples Neospora caninum specific antibodies (Svanovir((R))Elisa) were detected in 30% of the lactating animals. The present study demonstrates that parasitic infections occur frequently in dairy cattle around Hanoi although animals are mainly kept confined, and indicates that further research on the economic impact of these infections is needed.     

Growth performance,carcass quality characteristics and colonic microbiota profiles in finishing pigs fed diets with different inclusion levels of rice distillers’ by‐product

The aim of this study was to evaluate the effects of diets containing rice distillers’ by‐product (RDP) on growth performance, carcass characteristics, meat quality, and gut microbiota of fattening pigs. Twenty‐four crossbred finishing pigs (Duroc × Landrace × Yorkshire), 56.9 ± 3.1 kg initial body weight, were randomly allocated to three groups. For 56 days, pigs were fed one of three diets including RDP0 (control), RDP15 (15% RDP in DM), and RDP30 (30% RDP in DM). With RDP level in diet, average daily gain and backfat thickness linearly increased (p < 0.05), and drip loss tended to increase (p ≤ 0.08). In addition, 16S ribosomal RNA gene amplicon profiling showed that RDP was associated with modulation of colonic microbiota composition, especially at family and genus levels. Relative abundance of Porphyromonadaceae and Erysipelotrichaceae families in colonic digesta increased with inclusion of RDP, while that of Enterobacteriaceae decreased. The proportion of genera unclassified Erysipelotrichaceae, and Butyrivibrio increased as inclusion of RDP. These results indicate that up to 30% inclusion in diet of finishing pigs, RDP can modulate colonic microbiota composition, and induces an improvement of animal growth and fat deposition.