In search of a variance estimator for systematic sampling

Seven variance estimators to be used under systematic sampling are evaluated in a simulation study with 270 artificial spatial populations with different levels and structure of autocorrelation. In settings without an auxiliary variable a proposed new spatial resampling estimator RHO is recommended. In setting with an auxiliary variable, an estimator based on post-stratification (PST), and one with a correction for spatial autocorrelation (DOR), generated estimates with less bias than the SRS estimator in the majority of studied settings. Only in populations with either a near zero autocorrelation at the interval of sampling, or a very strong correlation between the target and the auxiliary variable did the otherwise conservative SRS estimator perform as well as the alternatives.     

Determination of hematologic and blood chemical reference values in fattening pigs of different ages

In swine medicine, the determination of hematology and blood chemistry parameters is of primary interest in connection with the detection of herd problems. For the evaluation of laboratory results the availability of reference values is a prerequisite. So far, no reference values of fattening pigs have been available in Switzerland. For this reason, in the present study reference values for hematology and blood chemistry were determined for two bodyweight categories, 40-60 kg (group 1) and 85-110 kg (group 2). Hematocrit, hemoglobin and RBC counts were lower in animals in group 1. The number of segmented neutrophils was markedly higher in group 1. Lymphocyte counts exceeded neutrophil values in both groups. Concentrations of total bilirubin, AST, CK and LDH partly reached very high levels due to hemolysis or contamination of the blood samples with muscle tissue.     

Combination of polyacrylamide gel electrophoresis with enzyme-linked immunosorbent assay: A simple method for determination of antibody specificity and detection of antigens in complex mixtures

Complex antigenic mixtures were separated on polyacrylamide gels in the presence of SDS. After electrophoresis, the gels were cut into equal fractions. Antigens were eluted from the fractions and could be bound to different solid phases on which a conventional enzyme-linked immunosorbent assay was performed. Antibody binding fractions could then be related with the bands of a stained gel run in parallel. This technique proved to be fast and sensitive. Antigens present in nanogram amounts in individual fractions were sufficient for the detection of specific antibody. We describe here the application of this technique to antibodies specific of parasite, viral, bacterial and mycoplasmal antigens and to antibodies against hormones and a muscle protein.     

Suitability of SSCP-PCR analysis for molecular detection of quinolone resistance in Campylobacter jejuni

Foodborne infections with Campylobacter spp. are increasing, especially antibiotic resistant strains are emerging. Quinolone resistant isolates can cause failure of therapy in severe clinical infections. Molecular characterisation is needed for the detection of resistant variants of C. jejuni. Therefore 23 isolates from poultry and human medicine as well as three control strains were tested for their minimal inhibitory concentration, their Single-Strand-Conformation-Polymorphism (SSCP)-PCR pattern (a method for the detection of resistance determining point mutations), and their sequence of the quinolone resistance determining region (QRDR). Six different SSCP types could be identified: two types for quinolone resistant isolates and other types containing so called silent mutations without influence on the resistance. A genotypic monitoring of the quinolone resistance in C. jejuni can be useful for the early detection of new resistance variants. As a screening method for detection of point mutations in the QRDR the SSCP-PCR can be applied. Compared to other genotypic methods the SSCP-PCR is less time and cost consuming and needs only standard technical equipment.     

New molecular biology detection methods for tick-borne infectious agents

Tick-borne zoonotic pathogens are well known in many areas all over the world. Among the tick-borne transmitted diseases in Switzerland, Lyme disease caused by Borrelia burgdorferi, ehrlichiosis caused by various species of Ehrlichia and tick-borne encephalitis caused by the tick-borne encephalitis virus (TBEV) are the most important zoonotic diseases. Early diagnosis and treatment is necessary to prevent fatal infections and chronic damage to various tissues. Due to the variety of uncharacteristic clinical signs, tick-borne diseases are not easily recognized. Diagnosis is based on clinical findings, a record of tick exposure, and direct or indirect detection of the pathogen. Here we discuss briefly the most important tick-borne infections and their diagnosis with emphasis on a new molecular diagnostic tool--the real-time TaqMan PCR--and its importance for the diagnosis of tick-borne pathogens.     

The "Friedrich-Loeffler-Institut": past, present and future of research in infectious diseases of animals

The Friedrich-Loeffler-Institut, founded in 1910 by Friedrich Loeffler, the discoverer of the first animal virus, foot-and-mouth disease virus, is the oldest virological research facility in the world. Beyond viruses, its area of competence has significantly expanded since its foundation and now also covers bacterial, parasitic and prion diseases of livestock, poultry and aquatic animals. Presently located at four sites within Germany (Insel Riems, Jena,Tübingen,Wusterhausen) the tasks of the institute as delineated in the Animal Disease Act encompass research on infectious animal diseases including zoonoses, import/export examinations, epidemiological studies in case of outbreaks of notifiable animal diseases, acting as reference laboratory for notifiable animal diseases and nationwide quality management of diagnosis of notifiable animal diseases. It is obliged to publish and maintain up-to-date diagnostic regimes for notifiable animal diseases, and it publishes a yearly report on animal health in Germany. With the increasing importance of infectious diseases of animals, in particular those potentially harmful to man (zoonoses), the Friedrich-Loeffler-Institut will be moving into new facilities including laboratories and animal facilities up to the highest biosafety level at its main site Insel Riems on the occasion of its 100th anniversary.     

Relationships between soil properties and feeding activity of soil fauna in acid forest soils

We investigated the relationships between soil chemical properties, humus form, and feeding activity in eight forest sites in Northrhine‐Westphalia, Germany. The study sites varied in forest type (oak, oak‐hornbeam, spruce, and pine). Three study sites were located under the same climatic conditions, and five study sites were distributed all over Northrhine‐Westphalia. We determined humus form, soil chemical properties, and feeding activity in three replication plots per site. We used the bait‐lamina test to determine feeding activity of soil fauna. Independent of forest type, all study sites were very acid with pH(CaCl₂) values in the Ah horizon between 2.8 and 4.0. The three study sites located under the same climatic conditions showed very homogenous soil chemical properties (pH in Ah: 2.9–3.0), whereas the five other sites varied significantly due to their soil chemical parameters (pH in Ah: 2.8–4.0). All single sites presented feeding activities with a very low spatial heterogeneity. Forest types and climatic conditions were not related to activity of soil fauna. Feeding activity and thickness of the O layer were strongly negatively correlated, whereas the activity was strongly positively correlated to soil pH in the five study sites with a wide range of soil chemical parameters. The three extremely acid forest sites presented significant differences in feeding activities that were not related to soil chemical properties.     

Guideline for the description of soils in the Berlin metropolitan area: an extension for surveying and mapping anthropogenic and natural soils in urban environments within the German soil classification system

Journal of Soils and Sediments - In urban areas, humans shape the surface, (re-)deposit natural or technogenic material, and thus become the dominant soil formation factor. The 2015 edition of the...     

<Emphasis Type="Italic">Eimeria bovis</Emphasis> meront I-carrying host cells express parasite-specific antigens on their surface membrane

Host immune responses conducted against antigens of Eimeria bovis are key factors for the development of protective immunity against this protozoan disease. In this study we investigated the expression of E. bovis-derived antigens on the host cell surface membrane during E. bovis first merogony in vitro. Host cells carrying E. bovis-meront I stages expressed E. bovis host cell surface antigens (EbHCSAg) on their surface membrane which were recognised by hyperimmune sera of calves and by sera from rats immunized with E. bovis merozoites I, when tested by indirect immune fluorescent antibody test (IIFAT), laser scanning confocal microscopy (LSCM) and immune electron microscopy. Expression of EbHCSAg on permissive host cells was earliest detected 7 days p. i., thus coinciding with the onset of the parasite replication. Membrane-associated EbHCSAg were removed from infected host cells by proteinase K, partially by Triton X-100, Triton X-114 and Triton X-405, but not by 1 M NaCl, CHAPS or phospholipase C treatment. Antibodies, affinity-purified on paraformaldehyde/glutardialdehyde (PAGA)-fixed E. bovis meront I-infected bovine host cells bound to the surface meront I-carrying cells and to merozoites I (IIFAT, LSCM) but, in contrast to untreated sera, not to sporozoites. When tested on methanol-fixed merozoites I and sporozoites by IIFAT, affinity-purified antibodies bound to structures in the apical complex area of merozoites I, but not to sporozoites, whilst untreated sera caused diffuse labelling of internal structures of both parasite stages. Immune electron microscopy demonstrated binding of affinity-purified antibodies to micronemes and dense granules of merozoites I. Although the function of EbHCSAg is still unknown, results of this study might suggest an involvement in the development of protective immunity against E. bovis infections.